RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ANP32CO43423 234 aa36.13■■■■□ 3.37
SHARPIN-202ENST00000398712 SPATA31E1Q6ZUB1 1445 aa36.13■■■■□ 3.37
SHARPIN-202ENST00000398712 CFAP74Q9C0B2 1584 aa36.12■■■■□ 3.37
SHARPIN-202ENST00000398712 WASHC2AQ641Q2 1341 aa36.11■■■■□ 3.37
SHARPIN-202ENST00000398712 POLR1AO95602 1720 aaPredicted RBP36.1■■■■□ 3.37
SHARPIN-202ENST00000398712 RALGAPBQ86X10 1494 aa36.07■■■■□ 3.36
SHARPIN-202ENST00000398712 ATP10AO60312 1499 aa36.06■■■■□ 3.36
SHARPIN-202ENST00000398712 DEPDC5O75140 1603 aa36.06■■■■□ 3.36
SHARPIN-202ENST00000398712 PLA2R1Q13018 1463 aa36.05■■■■□ 3.36
SHARPIN-202ENST00000398712 CCER2I3L3R5 266 aa36.04■■■■□ 3.36
SHARPIN-202ENST00000398712 ZNF326Q5BKZ1 582 aaKnown RBP36.03■■■■□ 3.36
SHARPIN-202ENST00000398712 CD109Q6YHK3 1445 aa36.02■■■■□ 3.36
SHARPIN-202ENST00000398712 EIF2AK4Q9P2K8 1649 aaKnown RBP36.02■■■■□ 3.36
SHARPIN-202ENST00000398712 CCDC7Q96M83 1385 aa36.01■■■■□ 3.36
SHARPIN-202ENST00000398712 ZNF518AQ6AHZ1 1483 aa35.99■■■■□ 3.35
SHARPIN-202ENST00000398712 KDM5CP41229 1560 aa35.98■■■■□ 3.35
SHARPIN-202ENST00000398712 USP47Q96K76 1375 aa35.97■■■■□ 3.35
SHARPIN-202ENST00000398712 CNTLNQ9NXG0 1405 aa35.96■■■■□ 3.35
SHARPIN-202ENST00000398712 DCAF11Q8TEB1 546 aa35.96■■■■□ 3.35
SHARPIN-202ENST00000398712 GTF3C3Q9Y5Q9 886 aa35.96■■■■□ 3.35
SHARPIN-202ENST00000398712 MYT1LQ9UL68 1186 aa35.94■■■■□ 3.34
SHARPIN-202ENST00000398712 DHX29Q7Z478 1369 aaKnown RBP35.93■■■■□ 3.34
SHARPIN-202ENST00000398712 E9PCH4 1651 aa35.93■■■■□ 3.34
SHARPIN-202ENST00000398712 KIDINS220Q9ULH0 1771 aa35.93■■■■□ 3.34
SHARPIN-202ENST00000398712 KANK1Q14678 1352 aa35.92■■■■□ 3.34
SHARPIN-202ENST00000398712 TET3O43151 1660 aa35.92■■■■□ 3.34
SHARPIN-202ENST00000398712 C11orf95C9JLR9 678 aaPredicted RBP35.91■■■■□ 3.34
SHARPIN-202ENST00000398712 KDM2AQ9Y2K7 1162 aa35.91■■■■□ 3.34
SHARPIN-202ENST00000398712 VWDEQ8N2E2 1590 aa35.9■■■■□ 3.34
SHARPIN-202ENST00000398712 POGZQ7Z3K3 1410 aa35.87■■■■□ 3.33
SHARPIN-202ENST00000398712 PRDM15P57071 1507 aaPredicted RBP35.87■■■■□ 3.33
SHARPIN-202ENST00000398712 KIF7Q2M1P5 1343 aa35.86■■■■□ 3.33
SHARPIN-202ENST00000398712 PRAG1Q86YV5 1406 aa35.86■■■■□ 3.33
SHARPIN-202ENST00000398712 A2MP01023 1474 aa35.85■■■■□ 3.33
SHARPIN-202ENST00000398712 CARD11Q9BXL7 1154 aa35.85■■■■□ 3.33
SHARPIN-202ENST00000398712 TRPM1Q7Z4N2 1603 aa35.84■■■■□ 3.33
SHARPIN-202ENST00000398712 SPHKAPQ2M3C7 1700 aa35.84■■■■□ 3.33
SHARPIN-202ENST00000398712 TRPM2O94759 1503 aa35.84■■■■□ 3.33
SHARPIN-202ENST00000398712 NEO1Q92859 1461 aa35.84■■■■□ 3.33
SHARPIN-202ENST00000398712 KIF3BO15066 747 aa35.81■■■■□ 3.32
SHARPIN-202ENST00000398712 ARID4BQ4LE39 1312 aaPredicted RBP35.81■■■■□ 3.32
SHARPIN-202ENST00000398712 BCORL1Q5H9F3 1711 aa35.81■■■■□ 3.32
SHARPIN-202ENST00000398712 MROH1Q8NDA8 1641 aa35.81■■■■□ 3.32
SHARPIN-202ENST00000398712 MLH3Q9UHC1 1453 aa35.8■■■■□ 3.32
SHARPIN-202ENST00000398712 RGL3Q3MIN7 710 aa35.79■■■■□ 3.32
SHARPIN-202ENST00000398712 PTPRTO14522 1441 aa35.79■■■■□ 3.32
SHARPIN-202ENST00000398712 HECW2Q9P2P5 1572 aa35.79■■■■□ 3.32
SHARPIN-202ENST00000398712 ROCK2O75116 1388 aaKnown RBP35.78■■■■□ 3.32
SHARPIN-202ENST00000398712 CEP152O94986 1710 aa35.76■■■■□ 3.32
SHARPIN-202ENST00000398712 LAMC1P11047 1609 aa35.74■■■■□ 3.31
SHARPIN-202ENST00000398712 RNF17Q9BXT8 1623 aaKnown RBP35.74■■■■□ 3.31
SHARPIN-202ENST00000398712 MAP3K4Q9Y6R4 1608 aa35.73■■■■□ 3.31
SHARPIN-202ENST00000398712 GLI2P10070 1586 aa35.7■■■■□ 3.31
SHARPIN-202ENST00000398712 GPRASP1Q5JY77 1395 aa35.69■■■■□ 3.3
SHARPIN-202ENST00000398712 CLTCL1P53675 1640 aa35.68■■■■□ 3.3
SHARPIN-202ENST00000398712 LMTK2Q8IWU2 1503 aa35.67■■■■□ 3.3
SHARPIN-202ENST00000398712 EFCAB6Q5THR3 1501 aa35.67■■■■□ 3.3
SHARPIN-202ENST00000398712 ABCA6Q8N139 1617 aa35.64■■■■□ 3.3
SHARPIN-202ENST00000398712 FRMPD1Q5SYB0 1578 aa35.63■■■■□ 3.29
SHARPIN-202ENST00000398712 NEURL4Q96JN8 1562 aa35.63■■■■□ 3.29
SHARPIN-202ENST00000398712 STAC3Q96MF2 364 aa35.62■■■■□ 3.29
SHARPIN-202ENST00000398712 ST20-MTHFSA0A0A6YYL1 179 aa35.61■■■■□ 3.29
SHARPIN-202ENST00000398712 PPRC1Q5VV67 1664 aaKnown RBP35.59■■■■□ 3.29
SHARPIN-202ENST00000398712 PRKRIP1Q9H875 184 aaPredicted RBP35.59■■■■□ 3.29
SHARPIN-202ENST00000398712 RICTORQ6R327 1708 aa35.58■■■■□ 3.29
SHARPIN-202ENST00000398712 MADDQ8WXG6 1647 aa35.56■■■■□ 3.28
SHARPIN-202ENST00000398712 NBPF1Q3BBV0 1214 aa35.54■■■■□ 3.28
SHARPIN-202ENST00000398712 DIP2BQ9P265 1576 aa35.53■■■■□ 3.28
SHARPIN-202ENST00000398712 POLR3GLQ9BT43 218 aa35.53■■■■□ 3.28
SHARPIN-202ENST00000398712 DIP2CQ9Y2E4 1556 aa35.51■■■■□ 3.28
SHARPIN-202ENST00000398712 KIF1BO60333 1816 aa35.51■■■■□ 3.28
SHARPIN-202ENST00000398712 RAPGEF3O95398 923 aa35.51■■■■□ 3.27
SHARPIN-202ENST00000398712 KIAA1210Q9ULL0 1709 aa35.41■■■■□ 3.26
SHARPIN-202ENST00000398712 ABCC3O15438 1527 aa35.41■■■■□ 3.26
SHARPIN-202ENST00000398712 UGGT1Q9NYU2 1555 aa35.41■■■■□ 3.26
SHARPIN-202ENST00000398712 GGT6Q6P531 493 aa35.41■■■■□ 3.26
SHARPIN-202ENST00000398712 FAM69CQ0P6D2 419 aa35.39■■■■□ 3.26
SHARPIN-202ENST00000398712 IQGAP1P46940 1657 aa35.39■■■■□ 3.26
SHARPIN-202ENST00000398712 COL17A1Q9UMD9 1497 aaPredicted RBP35.39■■■■□ 3.26
SHARPIN-202ENST00000398712 MYOM2P54296 1465 aa35.38■■■■□ 3.25
SHARPIN-202ENST00000398712 TRHP20396 242 aaPredicted RBP35.38■■■■□ 3.25
SHARPIN-202ENST00000398712 NPATQ14207 1427 aa35.37■■■■□ 3.25
SHARPIN-202ENST00000398712 CAMSAP1Q5T5Y3 1602 aa35.37■■■■□ 3.25
SHARPIN-202ENST00000398712 IFT172Q9UG01 1749 aa35.36■■■■□ 3.25
SHARPIN-202ENST00000398712 ZMYM4Q5VZL5 1548 aa35.36■■■■□ 3.25
SHARPIN-202ENST00000398712 KIF13AQ9H1H9 1805 aa35.36■■■■□ 3.25
SHARPIN-202ENST00000398712 WASHC2CQ9Y4E1 1318 aa35.35■■■■□ 3.25
SHARPIN-202ENST00000398712 ZC3H13Q5T200 1668 aaKnown RBP35.34■■■■□ 3.25
SHARPIN-202ENST00000398712 MROH2AA6NES4 1674 aa35.34■■■■□ 3.25
SHARPIN-202ENST00000398712 MRS2Q9HD23 443 aa35.33■■■■□ 3.25
SHARPIN-202ENST00000398712 TESK2Q96S53 571 aa35.33■■■■□ 3.25
SHARPIN-202ENST00000398712 ADGRB3O60242 1522 aa35.32■■■■□ 3.24
SHARPIN-202ENST00000398712 CCDC184Q52MB2 194 aa35.3■■■■□ 3.24
SHARPIN-202ENST00000398712 YEATS2Q9ULM3 1422 aa35.3■■■■□ 3.24
SHARPIN-202ENST00000398712 SCAF11Q99590 1463 aaKnown RBP35.29■■■■□ 3.24
SHARPIN-202ENST00000398712 TMF1P82094 1093 aa35.28■■■■□ 3.24
SHARPIN-202ENST00000398712 TSPOAP1O95153 1857 aa35.28■■■■□ 3.24
SHARPIN-202ENST00000398712 KTN1Q86UP2 1357 aaKnown RBP35.27■■■■□ 3.24
SHARPIN-202ENST00000398712 HNRNPUQ00839 825 aaKnown RBP eCLIP35.25■■■■□ 3.23
SHARPIN-202ENST00000398712 DISP3Q9P2K9 1392 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms