RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PANK3Q9H999 370 aa20.35■□□□□ 0.85
PCDHA12-201ENST00000398631 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
PCDHA12-201ENST00000398631 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
PCDHA12-201ENST00000398631 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
PCDHA12-201ENST00000398631 COG3Q96JB2 828 aa20.32■□□□□ 0.84
PCDHA12-201ENST00000398631 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 GBP4Q96PP9 640 aa20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
PCDHA12-201ENST00000398631 NAP1L5Q96NT1 182 aaPredicted RBP20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 L1TD1Q5T7N2 865 aaKnown RBP20.3■□□□□ 0.84
PCDHA12-201ENST00000398631 IGF1RP08069 1367 aa20.29■□□□□ 0.84
PCDHA12-201ENST00000398631 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
PCDHA12-201ENST00000398631 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
PCDHA12-201ENST00000398631 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
PCDHA12-201ENST00000398631 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 PTMSP20962 102 aa20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
PCDHA12-201ENST00000398631 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
PCDHA12-201ENST00000398631 USP47Q96K76 1375 aa20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 CLSTN1O94985 981 aa20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
PCDHA12-201ENST00000398631 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
PCDHA12-201ENST00000398631 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
PCDHA12-201ENST00000398631 MSNP26038 577 aaKnown RBP20.21■□□□□ 0.83
PCDHA12-201ENST00000398631 TEFQ10587 303 aa20.21■□□□□ 0.83
PCDHA12-201ENST00000398631 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.83
PCDHA12-201ENST00000398631 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
PCDHA12-201ENST00000398631 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 G3V3G9 751 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 DCAF8Q5TAQ9 597 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 E9PSI1 815 aa20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
PCDHA12-201ENST00000398631 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
PCDHA12-201ENST00000398631 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 CCDC34Q96HJ3 373 aa20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 EVA1CP58658 441 aa20.17■□□□□ 0.82
PCDHA12-201ENST00000398631 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
PCDHA12-201ENST00000398631 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
PCDHA12-201ENST00000398631 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.81
PCDHA12-201ENST00000398631 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
PCDHA12-201ENST00000398631 TOMM22Q9NS69 142 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 APAF1O14727 1248 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
PCDHA12-201ENST00000398631 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 PSME1Q06323 249 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 ST18O60284 1047 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 NEXNQ0ZGT2 675 aa20.11■□□□□ 0.81
PCDHA12-201ENST00000398631 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
PCDHA12-201ENST00000398631 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
PCDHA12-201ENST00000398631 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
PCDHA12-201ENST00000398631 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
PCDHA12-201ENST00000398631 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.8
PCDHA12-201ENST00000398631 KIF16BQ96L93 1317 aa20.08■□□□□ 0.8
PCDHA12-201ENST00000398631 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
PCDHA12-201ENST00000398631 CUX1P39880 1505 aa20.07■□□□□ 0.8
PCDHA12-201ENST00000398631 TPM4P67936 248 aa20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 ANKRD50Q9ULJ7 1429 aa20.06■□□□□ 0.8
PCDHA12-201ENST00000398631 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RASSF8Q8NHQ8 419 aa20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
PCDHA12-201ENST00000398631 RIPK4P57078 832 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 RRP1P56182 461 aaKnown RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 COG6Q9Y2V7 657 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 PLIN1O60240 522 aa20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 API5Q9BZZ5 524 aaKnown RBP20.04■□□□□ 0.8
PCDHA12-201ENST00000398631 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.79
PCDHA12-201ENST00000398631 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.79
PCDHA12-201ENST00000398631 LRRFIP1Q32MZ4 808 aaKnown RBP20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 DDX58O95786 925 aaKnown RBP20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
PCDHA12-201ENST00000398631 EXOC6Q8TAG9 804 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 AFAP1Q8N556 730 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 ATF3P18847 181 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
PCDHA12-201ENST00000398631 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
PCDHA12-201ENST00000398631 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms