RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
TFF3-202ENST00000398431 LOC105371045A0A1W2PR82 267 aa19.24■□□□□ 0.67
TFF3-202ENST00000398431 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
TFF3-202ENST00000398431 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
TFF3-202ENST00000398431 TNRQ92752 1358 aa19.2■□□□□ 0.66
TFF3-202ENST00000398431 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
TFF3-202ENST00000398431 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
TFF3-202ENST00000398431 PZPP20742 1482 aa19.2■□□□□ 0.66
TFF3-202ENST00000398431 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
TFF3-202ENST00000398431 UBAP1LF5GYI3 381 aa19.19■□□□□ 0.66
TFF3-202ENST00000398431 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
TFF3-202ENST00000398431 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
TFF3-202ENST00000398431 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
TFF3-202ENST00000398431 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
TFF3-202ENST00000398431 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
TFF3-202ENST00000398431 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
TFF3-202ENST00000398431 NEURL4Q96JN8 1562 aa19.15■□□□□ 0.66
TFF3-202ENST00000398431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.65
TFF3-202ENST00000398431 ANKLE2Q86XL3 938 aa19.13■□□□□ 0.65
TFF3-202ENST00000398431 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
TFF3-202ENST00000398431 SOCS7O14512 581 aa19.12■□□□□ 0.65
TFF3-202ENST00000398431 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
TFF3-202ENST00000398431 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
TFF3-202ENST00000398431 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TFF3-202ENST00000398431 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
TFF3-202ENST00000398431 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
TFF3-202ENST00000398431 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
TFF3-202ENST00000398431 RNF17Q9BXT8 1623 aaKnown RBP19.08■□□□□ 0.65
TFF3-202ENST00000398431 UGGT1Q9NYU2 1555 aa19.07■□□□□ 0.64
TFF3-202ENST00000398431 ABCC3O15438 1527 aa19.07■□□□□ 0.64
TFF3-202ENST00000398431 MED14O60244 1454 aa19.07■□□□□ 0.64
TFF3-202ENST00000398431 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
TFF3-202ENST00000398431 CPS1P31327 1500 aa19.05■□□□□ 0.64
TFF3-202ENST00000398431 MROH1Q8NDA8 1641 aa19.05■□□□□ 0.64
TFF3-202ENST00000398431 NPHP4O75161 1426 aaPredicted RBP19.05■□□□□ 0.64
TFF3-202ENST00000398431 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
TFF3-202ENST00000398431 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
TFF3-202ENST00000398431 TOM1O60784 492 aa19.03■□□□□ 0.64
TFF3-202ENST00000398431 HSPA1LP34931 641 aa19.03■□□□□ 0.64
TFF3-202ENST00000398431 EIF2AK4Q9P2K8 1649 aaKnown RBP19.03■□□□□ 0.64
TFF3-202ENST00000398431 ERVK-7P63135 1459 aa19.02■□□□□ 0.63
TFF3-202ENST00000398431 CFAP65Q6ZU64 1925 aaKnown RBP19.02■□□□□ 0.63
TFF3-202ENST00000398431 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
TFF3-202ENST00000398431 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
TFF3-202ENST00000398431 ABCC5O15440 1437 aa19■□□□□ 0.63
TFF3-202ENST00000398431 DUOX2Q9NRD8 1548 aa18.99■□□□□ 0.63
TFF3-202ENST00000398431 CEP152O94986 1710 aa18.98■□□□□ 0.63
TFF3-202ENST00000398431 RRP7BPQ9NSQ0 103 aa18.98■□□□□ 0.63
TFF3-202ENST00000398431 ALKQ9UM73 1620 aa18.98■□□□□ 0.63
TFF3-202ENST00000398431 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
TFF3-202ENST00000398431 STRCP1A6NGW2 1772 aa18.97■□□□□ 0.63
TFF3-202ENST00000398431 IQGAP1P46940 1657 aa18.96■□□□□ 0.63
TFF3-202ENST00000398431 LTKP29376 864 aa18.96■□□□□ 0.63
TFF3-202ENST00000398431 KIF15Q9NS87 1388 aa18.95■□□□□ 0.62
TFF3-202ENST00000398431 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
TFF3-202ENST00000398431 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
TFF3-202ENST00000398431 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
TFF3-202ENST00000398431 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
TFF3-202ENST00000398431 TXNDC2Q86VQ3 553 aa18.92■□□□□ 0.62
TFF3-202ENST00000398431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.62
TFF3-202ENST00000398431 DAPK1P53355 1430 aa18.91■□□□□ 0.62
TFF3-202ENST00000398431 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
TFF3-202ENST00000398431 ARHGAP23Q9P227 1491 aa18.91■□□□□ 0.62
TFF3-202ENST00000398431 PRDM15P57071 1507 aaPredicted RBP18.91■□□□□ 0.62
TFF3-202ENST00000398431 CROCC2H7BZ55 1655 aa18.9■□□□□ 0.62
TFF3-202ENST00000398431 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
TFF3-202ENST00000398431 SLIT1O75093 1534 aa18.9■□□□□ 0.62
TFF3-202ENST00000398431 APLP2Q06481 763 aa18.89■□□□□ 0.61
TFF3-202ENST00000398431 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
TFF3-202ENST00000398431 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
TFF3-202ENST00000398431 IDI1Q13907 227 aa18.87■□□□□ 0.61
TFF3-202ENST00000398431 MED1Q15648 1581 aaPredicted RBP18.87■□□□□ 0.61
TFF3-202ENST00000398431 TMEM2Q9UHN6 1383 aa18.84■□□□□ 0.61
TFF3-202ENST00000398431 EID1Q9Y6B2 187 aa18.84■□□□□ 0.61
TFF3-202ENST00000398431 PIK3C2BO00750 1634 aa18.84■□□□□ 0.61
TFF3-202ENST00000398431 KANK1Q14678 1352 aa18.83■□□□□ 0.61
TFF3-202ENST00000398431 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
TFF3-202ENST00000398431 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
TFF3-202ENST00000398431 SYNMO15061 1565 aa18.81■□□□□ 0.6
TFF3-202ENST00000398431 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
TFF3-202ENST00000398431 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
TFF3-202ENST00000398431 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
TFF3-202ENST00000398431 NOS1P29475 1434 aa18.79■□□□□ 0.6
TFF3-202ENST00000398431 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
TFF3-202ENST00000398431 ADGRL2O95490 1459 aa18.77■□□□□ 0.59
TFF3-202ENST00000398431 TET3O43151 1660 aa18.76■□□□□ 0.59
TFF3-202ENST00000398431 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
TFF3-202ENST00000398431 KCNA6P17658 529 aa18.76■□□□□ 0.59
TFF3-202ENST00000398431 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
TFF3-202ENST00000398431 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
TFF3-202ENST00000398431 FAM50AQ14320 339 aaKnown RBP18.73■□□□□ 0.59
TFF3-202ENST00000398431 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
TFF3-202ENST00000398431 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
TFF3-202ENST00000398431 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
TFF3-202ENST00000398431 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
TFF3-202ENST00000398431 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
TFF3-202ENST00000398431 ANKRD50Q9ULJ7 1429 aa18.71■□□□□ 0.59
TFF3-202ENST00000398431 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
TFF3-202ENST00000398431 ADGRB3O60242 1522 aa18.69■□□□□ 0.58
TFF3-202ENST00000398431 RPRD2Q5VT52 1461 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 307.4 ms