RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
NIFKP1-201ENST00000398317 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
NIFKP1-201ENST00000398317 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
NIFKP1-201ENST00000398317 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
NIFKP1-201ENST00000398317 STRCQ7RTU9 1775 aa15.78■□□□□ 0.12
NIFKP1-201ENST00000398317 SUPT6HQ7KZ85 1726 aaKnown RBP15.78■□□□□ 0.12
NIFKP1-201ENST00000398317 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
NIFKP1-201ENST00000398317 CERKQ8TCT0 537 aa15.75■□□□□ 0.11
NIFKP1-201ENST00000398317 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
NIFKP1-201ENST00000398317 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
NIFKP1-201ENST00000398317 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
NIFKP1-201ENST00000398317 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
NIFKP1-201ENST00000398317 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
NIFKP1-201ENST00000398317 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
NIFKP1-201ENST00000398317 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
NIFKP1-201ENST00000398317 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
NIFKP1-201ENST00000398317 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
NIFKP1-201ENST00000398317 EHBP1L1Q8N3D4 1523 aa15.72■□□□□ 0.11
NIFKP1-201ENST00000398317 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
NIFKP1-201ENST00000398317 A2MP01023 1474 aa15.71■□□□□ 0.1
NIFKP1-201ENST00000398317 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
NIFKP1-201ENST00000398317 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
NIFKP1-201ENST00000398317 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
NIFKP1-201ENST00000398317 PLXNC1O60486 1568 aa15.69■□□□□ 0.1
NIFKP1-201ENST00000398317 GGT6Q6P531 493 aa15.68■□□□□ 0.1
NIFKP1-201ENST00000398317 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
NIFKP1-201ENST00000398317 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
NIFKP1-201ENST00000398317 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
NIFKP1-201ENST00000398317 SPDYE1Q8NFV5 336 aaPredicted RBP15.65■□□□□ 0.1
NIFKP1-201ENST00000398317 NPATQ14207 1427 aa15.65■□□□□ 0.1
NIFKP1-201ENST00000398317 PTPRTO14522 1441 aa15.64■□□□□ 0.09
NIFKP1-201ENST00000398317 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
NIFKP1-201ENST00000398317 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
NIFKP1-201ENST00000398317 CAMSAP1Q5T5Y3 1602 aa15.63■□□□□ 0.09
NIFKP1-201ENST00000398317 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
NIFKP1-201ENST00000398317 CAMSAP2Q08AD1 1489 aa15.61■□□□□ 0.09
NIFKP1-201ENST00000398317 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
NIFKP1-201ENST00000398317 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
NIFKP1-201ENST00000398317 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
NIFKP1-201ENST00000398317 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
NIFKP1-201ENST00000398317 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
NIFKP1-201ENST00000398317 KIF3BO15066 747 aa15.58■□□□□ 0.08
NIFKP1-201ENST00000398317 ZNF142P52746 1687 aaPredicted RBP15.57■□□□□ 0.08
NIFKP1-201ENST00000398317 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
NIFKP1-201ENST00000398317 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
NIFKP1-201ENST00000398317 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
NIFKP1-201ENST00000398317 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
NIFKP1-201ENST00000398317 RSPH4AQ5TD94 716 aa15.55■□□□□ 0.08
NIFKP1-201ENST00000398317 KANK4Q5T7N3 995 aaPredicted RBP15.54■□□□□ 0.08
NIFKP1-201ENST00000398317 PROM2Q8N271 834 aa15.54■□□□□ 0.08
NIFKP1-201ENST00000398317 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
NIFKP1-201ENST00000398317 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
NIFKP1-201ENST00000398317 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
NIFKP1-201ENST00000398317 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
NIFKP1-201ENST00000398317 PKD2Q13563 968 aa15.52■□□□□ 0.08
NIFKP1-201ENST00000398317 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
NIFKP1-201ENST00000398317 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
NIFKP1-201ENST00000398317 WASHC2CQ9Y4E1 1318 aa15.51■□□□□ 0.07
NIFKP1-201ENST00000398317 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
NIFKP1-201ENST00000398317 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
NIFKP1-201ENST00000398317 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
NIFKP1-201ENST00000398317 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
NIFKP1-201ENST00000398317 TNRQ92752 1358 aa15.49■□□□□ 0.07
NIFKP1-201ENST00000398317 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
NIFKP1-201ENST00000398317 PZPP20742 1482 aa15.48■□□□□ 0.07
NIFKP1-201ENST00000398317 POTEHQ6S545 545 aa15.48■□□□□ 0.07
NIFKP1-201ENST00000398317 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
NIFKP1-201ENST00000398317 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
NIFKP1-201ENST00000398317 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
NIFKP1-201ENST00000398317 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.07
NIFKP1-201ENST00000398317 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
NIFKP1-201ENST00000398317 MAST1Q9Y2H9 1570 aa15.45■□□□□ 0.06
NIFKP1-201ENST00000398317 MYOM3Q5VTT5 1437 aa15.45■□□□□ 0.06
NIFKP1-201ENST00000398317 POLR1AO95602 1720 aaPredicted RBP15.45■□□□□ 0.06
NIFKP1-201ENST00000398317 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
NIFKP1-201ENST00000398317 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
NIFKP1-201ENST00000398317 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
NIFKP1-201ENST00000398317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.42■□□□□ 0.06
NIFKP1-201ENST00000398317 DISP3Q9P2K9 1392 aa15.42■□□□□ 0.06
NIFKP1-201ENST00000398317 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
NIFKP1-201ENST00000398317 NEURL4Q96JN8 1562 aa15.41■□□□□ 0.06
NIFKP1-201ENST00000398317 ABCC3O15438 1527 aa15.41■□□□□ 0.06
NIFKP1-201ENST00000398317 CEP152O94986 1710 aa15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 ANKLE2Q86XL3 938 aa15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 UGGT1Q9NYU2 1555 aa15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
NIFKP1-201ENST00000398317 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
NIFKP1-201ENST00000398317 ZC3H13Q5T200 1668 aaKnown RBP15.39■□□□□ 0.05
NIFKP1-201ENST00000398317 THEMISQ8N1K5 641 aaPredicted RBP15.39■□□□□ 0.05
NIFKP1-201ENST00000398317 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
NIFKP1-201ENST00000398317 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
NIFKP1-201ENST00000398317 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
NIFKP1-201ENST00000398317 ABCC5O15440 1437 aa15.37■□□□□ 0.05
NIFKP1-201ENST00000398317 ILDR2Q71H61 639 aa15.37■□□□□ 0.05
NIFKP1-201ENST00000398317 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
NIFKP1-201ENST00000398317 CROCC2H7BZ55 1655 aa15.37■□□□□ 0.05
NIFKP1-201ENST00000398317 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
NIFKP1-201ENST00000398317 ERVK-7P63135 1459 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms