RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 POGZQ7Z3K3 1410 aa6□□□□□ -1.45
UBE3A-202ENST00000397954 AKNAQ7Z591 1439 aa5.99□□□□□ -1.45
UBE3A-202ENST00000397954 PLEKHD1A6NEE1 506 aa5.99□□□□□ -1.45
UBE3A-202ENST00000397954 GTPBP6O43824 516 aaPredicted RBP5.99□□□□□ -1.45
UBE3A-202ENST00000397954 RSPH4AQ5TD94 716 aa5.99□□□□□ -1.45
UBE3A-202ENST00000397954 POLA2Q14181 598 aa5.98□□□□□ -1.45
UBE3A-202ENST00000397954 KDM5AP29375 1690 aaKnown RBP5.98□□□□□ -1.45
UBE3A-202ENST00000397954 FAM69CQ0P6D2 419 aa5.97□□□□□ -1.45
UBE3A-202ENST00000397954 C9orf84Q5VXU9 1444 aa5.97□□□□□ -1.45
UBE3A-202ENST00000397954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.97□□□□□ -1.456e-7■□□□□ 8.4
UBE3A-202ENST00000397954 CNTLNQ9NXG0 1405 aa5.97□□□□□ -1.45
UBE3A-202ENST00000397954 RNF17Q9BXT8 1623 aaKnown RBP5.97□□□□□ -1.45
UBE3A-202ENST00000397954 HRCP23327 699 aa5.96□□□□□ -1.45
UBE3A-202ENST00000397954 LMOD2Q6P5Q4 547 aa5.96□□□□□ -1.45
UBE3A-202ENST00000397954 MIER1Q8N108 512 aa5.96□□□□□ -1.45
UBE3A-202ENST00000397954 FER1L4A9Z1Z3 1794 aa5.96□□□□□ -1.45
UBE3A-202ENST00000397954 ARHGAP5Q13017 1502 aa5.96□□□□□ -1.46
UBE3A-202ENST00000397954 CDK13Q14004 1512 aaKnown RBP5.96□□□□□ -1.46
UBE3A-202ENST00000397954 ARHGEF12Q9NZN5 1544 aa5.96□□□□□ -1.46
UBE3A-202ENST00000397954 ADGRL1O94910 1474 aa5.96□□□□□ -1.46
UBE3A-202ENST00000397954 TCOF1Q13428 1488 aaKnown RBP5.96□□□□□ -1.46
UBE3A-202ENST00000397954 SAMD9LQ8IVG5 1584 aa5.96□□□□□ -1.46
UBE3A-202ENST00000397954 ZNF142P52746 1687 aaPredicted RBP5.95□□□□□ -1.46
UBE3A-202ENST00000397954 DIP2CQ9Y2E4 1556 aa5.95□□□□□ -1.46
UBE3A-202ENST00000397954 PREX1Q8TCU6 1659 aa5.95□□□□□ -1.46
UBE3A-202ENST00000397954 KDM5DQ9BY66 1539 aa5.95□□□□□ -1.46
UBE3A-202ENST00000397954 ATP10AO60312 1499 aa5.95□□□□□ -1.46
UBE3A-202ENST00000397954 KIDINS220Q9ULH0 1771 aa5.94□□□□□ -1.46
UBE3A-202ENST00000397954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBE3A-202ENST00000397954 LRRC9Q6ZRR7 1453 aa5.94□□□□□ -1.46
UBE3A-202ENST00000397954 NPM2Q86SE8 214 aaKnown RBP5.94□□□□□ -1.46
UBE3A-202ENST00000397954 EFCAB2Q5VUJ9 269 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 DEPDC5O75140 1603 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 DNMT1P26358 1616 aaKnown RBP5.93□□□□□ -1.46
UBE3A-202ENST00000397954 PTPN23Q9H3S7 1636 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 ATP7AQ04656 1500 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 NEUROD2Q15784 382 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 SPINK5Q9NQ38 1064 aaPredicted RBP5.93□□□□□ -1.46
UBE3A-202ENST00000397954 ABCA6Q8N139 1617 aa5.93□□□□□ -1.46
UBE3A-202ENST00000397954 GPATCH8Q9UKJ3 1502 aaKnown RBP5.93□□□□□ -1.46
UBE3A-202ENST00000397954 CCDC141Q6ZP82 1450 aa5.92□□□□□ -1.46
UBE3A-202ENST00000397954 NPATQ14207 1427 aa5.92□□□□□ -1.46
UBE3A-202ENST00000397954 KCNV2Q8TDN2 545 aa5.91□□□□□ -1.46
UBE3A-202ENST00000397954 ADGRL2O95490 1459 aa5.91□□□□□ -1.46
UBE3A-202ENST00000397954 SETD1BQ9UPS6 1966 aaKnown RBP5.91□□□□□ -1.46
UBE3A-202ENST00000397954 NCOA2Q15596 1464 aa5.9□□□□□ -1.46
UBE3A-202ENST00000397954 DUOX2Q9NRD8 1548 aa5.9□□□□□ -1.46
UBE3A-202ENST00000397954 MYOM3Q5VTT5 1437 aa5.9□□□□□ -1.46
UBE3A-202ENST00000397954 MTUS2Q5JR59 1369 aa5.9□□□□□ -1.47
UBE3A-202ENST00000397954 CCNB3Q8WWL7 1395 aa5.9□□□□□ -1.47
UBE3A-202ENST00000397954 ERBINQ96RT1 1412 aa5.9□□□□□ -1.47
UBE3A-202ENST00000397954 LMTK2Q8IWU2 1503 aa5.9□□□□□ -1.47
UBE3A-202ENST00000397954 STAG3Q9UJ98 1225 aa5.89□□□□□ -1.47
UBE3A-202ENST00000397954 CAMSAP2Q08AD1 1489 aa5.89□□□□□ -1.47
UBE3A-202ENST00000397954 IQSEC2Q5JU85 1478 aa5.89□□□□□ -1.47
UBE3A-202ENST00000397954 GCC2Q8IWJ2 1684 aa5.89□□□□□ -1.47
UBE3A-202ENST00000397954 PRDM15P57071 1507 aaPredicted RBP5.88□□□□□ -1.47
UBE3A-202ENST00000397954 SYCP2Q9BX26 1530 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 ARID3AQ99856 593 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 SCAPERQ9BY12 1400 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 SLC24A3Q9HC58 644 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 MBD5Q9P267 1494 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 STK25O00506 426 aa5.88□□□□□ -1.47
UBE3A-202ENST00000397954 UNC13BO14795 1591 aa5.87□□□□□ -1.47
UBE3A-202ENST00000397954 APLP2Q06481 763 aa5.87□□□□□ -1.47
UBE3A-202ENST00000397954 RIMS1Q86UR5 1692 aaKnown RBP5.87□□□□□ -1.47
UBE3A-202ENST00000397954 MADDQ8WXG6 1647 aa5.87□□□□□ -1.47
UBE3A-202ENST00000397954 COL17A1Q9UMD9 1497 aaPredicted RBP5.87□□□□□ -1.47
UBE3A-202ENST00000397954 C3P01024 1663 aa5.87□□□□□ -1.47
UBE3A-202ENST00000397954 NEURL4Q96JN8 1562 aa5.87□□□□□ -1.47
UBE3A-202ENST00000397954 VWDEQ8N2E2 1590 aa5.86□□□□□ -1.47
UBE3A-202ENST00000397954 ROCK1Q13464 1354 aa5.86□□□□□ -1.47
UBE3A-202ENST00000397954 ZC3H15Q8WU90 426 aaKnown RBP5.86□□□□□ -1.47
UBE3A-202ENST00000397954 A2MP01023 1474 aa5.86□□□□□ -1.47
UBE3A-202ENST00000397954 RPRD2Q5VT52 1461 aaKnown RBP5.86□□□□□ -1.47
UBE3A-202ENST00000397954 P3H3Q8IVL6 736 aa5.85□□□□□ -1.47
UBE3A-202ENST00000397954 ARHGAP31Q2M1Z3 1444 aa5.85□□□□□ -1.47
UBE3A-202ENST00000397954 PLA2R1Q13018 1463 aa5.85□□□□□ -1.47
UBE3A-202ENST00000397954 ZNF692Q9BU19 519 aaPredicted RBP5.85□□□□□ -1.47
UBE3A-202ENST00000397954 CADPS2Q86UW7 1296 aa5.85□□□□□ -1.47
UBE3A-202ENST00000397954 POLR1AO95602 1720 aaPredicted RBP5.84□□□□□ -1.47
UBE3A-202ENST00000397954 C1orf115Q9H7X2 142 aa5.84□□□□□ -1.47
UBE3A-202ENST00000397954 TET3O43151 1660 aa5.84□□□□□ -1.47
UBE3A-202ENST00000397954 CAMSAP1Q5T5Y3 1602 aa5.84□□□□□ -1.47
UBE3A-202ENST00000397954 MYO3AQ8NEV4 1616 aa5.84□□□□□ -1.48
UBE3A-202ENST00000397954 PTPRMP28827 1452 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 LMTK3Q96Q04 1460 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 IQGAP3Q86VI3 1631 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 NLRP1Q9C000 1473 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 SPATA31D1Q6ZQQ2 1576 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 FGD6Q6ZV73 1430 aa5.83□□□□□ -1.48
UBE3A-202ENST00000397954 RIOK3O14730 519 aaKnown RBP5.83□□□□□ -1.48
UBE3A-202ENST00000397954 DHX29Q7Z478 1369 aaKnown RBP5.83□□□□□ -1.48
UBE3A-202ENST00000397954 SIGLEC1Q9BZZ2 1709 aa5.82□□□□□ -1.48
UBE3A-202ENST00000397954 PZPP20742 1482 aa5.82□□□□□ -1.48
UBE3A-202ENST00000397954 CLTCQ00610 1675 aaKnown RBP5.82□□□□□ -1.48
UBE3A-202ENST00000397954 ABCB7O75027 752 aa5.82□□□□□ -1.48
UBE3A-202ENST00000397954 RRBP1Q9P2E9 1410 aaKnown RBP5.81□□□□□ -1.48
UBE3A-202ENST00000397954 MROH1Q8NDA8 1641 aa5.81□□□□□ -1.48
UBE3A-202ENST00000397954 SYNMO15061 1565 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms