RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 NUP155O75694 1391 aa23.02■■□□□ 1.28
EWSR1-206ENST00000397938 ZNF777Q9ULD5 760 aaPredicted RBP23.01■■□□□ 1.27
EWSR1-206ENST00000397938 SHANK2Q9UPX8 1470 aa23.01■■□□□ 1.27
EWSR1-206ENST00000397938 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
EWSR1-206ENST00000397938 PPM1GO15355 546 aaPredicted RBP22.99■■□□□ 1.27
EWSR1-206ENST00000397938 IL27Q8NEV9 243 aa22.98■■□□□ 1.27
EWSR1-206ENST00000397938 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
EWSR1-206ENST00000397938 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
EWSR1-206ENST00000397938 ZMYM4Q5VZL5 1548 aa22.96■■□□□ 1.27
EWSR1-206ENST00000397938 INSRP06213 1382 aa22.96■■□□□ 1.27
EWSR1-206ENST00000397938 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
EWSR1-206ENST00000397938 PTPRGP23470 1445 aa22.95■■□□□ 1.26
EWSR1-206ENST00000397938 TRPM1Q7Z4N2 1603 aa22.95■■□□□ 1.26
EWSR1-206ENST00000397938 WASHC2CQ9Y4E1 1318 aa22.95■■□□□ 1.26
EWSR1-206ENST00000397938 DCAF11Q8TEB1 546 aa22.95■■□□□ 1.26
EWSR1-206ENST00000397938 PLB1Q6P1J6 1458 aa22.94■■□□□ 1.26
EWSR1-206ENST00000397938 BLMP54132 1417 aaPredicted RBP22.94■■□□□ 1.26
EWSR1-206ENST00000397938 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
EWSR1-206ENST00000397938 CDCA7LQ96GN5 454 aa22.94■■□□□ 1.26
EWSR1-206ENST00000397938 GRIN2AQ12879 1464 aa22.93■■□□□ 1.26
EWSR1-206ENST00000397938 ZNF608Q9ULD9 1512 aaPredicted RBP22.93■■□□□ 1.26
EWSR1-206ENST00000397938 DDRGK1Q96HY6 314 aa22.92■■□□□ 1.26
EWSR1-206ENST00000397938 ANO8Q9HCE9 1232 aaPredicted RBP22.92■■□□□ 1.26
EWSR1-206ENST00000397938 PER1O15534 1290 aaPredicted RBP22.9■■□□□ 1.26
EWSR1-206ENST00000397938 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
EWSR1-206ENST00000397938 PRKCSHP14314 528 aaPredicted RBP22.89■■□□□ 1.26
EWSR1-206ENST00000397938 PLEKHH2Q8IVE3 1493 aa22.89■■□□□ 1.26
EWSR1-206ENST00000397938 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
EWSR1-206ENST00000397938 CRBNQ96SW2 442 aa22.89■■□□□ 1.25
EWSR1-206ENST00000397938 PLIN1O60240 522 aa22.88■■□□□ 1.25
EWSR1-206ENST00000397938 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
EWSR1-206ENST00000397938 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
EWSR1-206ENST00000397938 ABCC10Q5T3U5 1492 aa22.86■■□□□ 1.25
EWSR1-206ENST00000397938 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
EWSR1-206ENST00000397938 LAMC1P11047 1609 aa22.85■■□□□ 1.25
EWSR1-206ENST00000397938 GPRASP1Q5JY77 1395 aa22.84■■□□□ 1.25
EWSR1-206ENST00000397938 SKAP1Q86WV1 359 aa22.83■■□□□ 1.25
EWSR1-206ENST00000397938 RTN4Q9NQC3 1192 aaKnown RBP22.83■■□□□ 1.24
EWSR1-206ENST00000397938 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
EWSR1-206ENST00000397938 ARHGEF5Q12774 1597 aa22.82■■□□□ 1.24
EWSR1-206ENST00000397938 PRDM15P57071 1507 aaPredicted RBP22.81■■□□□ 1.24
EWSR1-206ENST00000397938 KDM2BQ8NHM5 1336 aa22.81■■□□□ 1.24
EWSR1-206ENST00000397938 TSPY4P0CV99 314 aa22.8■■□□□ 1.24
EWSR1-206ENST00000397938 TSPY10P0CW01 314 aa22.8■■□□□ 1.24
EWSR1-206ENST00000397938 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
EWSR1-206ENST00000397938 DISP3Q9P2K9 1392 aa22.78■■□□□ 1.24
EWSR1-206ENST00000397938 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
EWSR1-206ENST00000397938 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
EWSR1-206ENST00000397938 ABCA8O94911 1581 aa22.77■■□□□ 1.24
EWSR1-206ENST00000397938 GSE1Q14687 1217 aa22.76■■□□□ 1.23
EWSR1-206ENST00000397938 NBPF1Q3BBV0 1214 aa22.76■■□□□ 1.23
EWSR1-206ENST00000397938 NFKBIBQ15653 356 aa22.76■■□□□ 1.23
EWSR1-206ENST00000397938 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
EWSR1-206ENST00000397938 TESK2Q96S53 571 aa22.76■■□□□ 1.23
EWSR1-206ENST00000397938 A2MP01023 1474 aa22.75■■□□□ 1.23
EWSR1-206ENST00000397938 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
EWSR1-206ENST00000397938 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
EWSR1-206ENST00000397938 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
EWSR1-206ENST00000397938 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
EWSR1-206ENST00000397938 PANK3Q9H999 370 aa22.74■■□□□ 1.23
EWSR1-206ENST00000397938 EIF2AK4Q9P2K8 1649 aaKnown RBP22.73■■□□□ 1.23
EWSR1-206ENST00000397938 MYO5CQ9NQX4 1742 aa22.72■■□□□ 1.23
EWSR1-206ENST00000397938 ATP10BO94823 1461 aa22.71■■□□□ 1.23
EWSR1-206ENST00000397938 HNRNPMP52272 730 aaKnown RBP eCLIP22.7■■□□□ 1.22
EWSR1-206ENST00000397938 PLA2R1Q13018 1463 aa22.7■■□□□ 1.22
EWSR1-206ENST00000397938 CCDC141Q6ZP82 1450 aa22.7■■□□□ 1.22
EWSR1-206ENST00000397938 FAM161AQ3B820 660 aa22.7■■□□□ 1.22
EWSR1-206ENST00000397938 UNC13BO14795 1591 aa22.69■■□□□ 1.22
EWSR1-206ENST00000397938 SLC4A3P48751 1232 aa22.68■■□□□ 1.22
EWSR1-206ENST00000397938 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
EWSR1-206ENST00000397938 C8orf34Q49A92 452 aa22.68■■□□□ 1.22
EWSR1-206ENST00000397938 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
EWSR1-206ENST00000397938 BRPF3Q9ULD4 1205 aa22.68■■□□□ 1.22
EWSR1-206ENST00000397938 RGL3Q3MIN7 710 aa22.67■■□□□ 1.22
EWSR1-206ENST00000397938 ADAMTS8Q9UP79 889 aa22.67■■□□□ 1.22
EWSR1-206ENST00000397938 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
EWSR1-206ENST00000397938 SAMD9LQ8IVG5 1584 aa22.67■■□□□ 1.22
EWSR1-206ENST00000397938 TMF1P82094 1093 aa22.66■■□□□ 1.22
EWSR1-206ENST00000397938 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
EWSR1-206ENST00000397938 NUP160Q12769 1436 aa22.66■■□□□ 1.22
EWSR1-206ENST00000397938 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
EWSR1-206ENST00000397938 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.22
EWSR1-206ENST00000397938 ZNF521Q96K83 1311 aa22.64■■□□□ 1.21
EWSR1-206ENST00000397938 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
EWSR1-206ENST00000397938 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
EWSR1-206ENST00000397938 PREX2Q70Z35 1606 aa22.63■■□□□ 1.21
EWSR1-206ENST00000397938 JPH4Q96JJ6 628 aa22.62■■□□□ 1.21
EWSR1-206ENST00000397938 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
EWSR1-206ENST00000397938 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
EWSR1-206ENST00000397938 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.61■■□□□ 1.21
EWSR1-206ENST00000397938 MAGI2Q86UL8 1455 aa22.6■■□□□ 1.21
EWSR1-206ENST00000397938 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
EWSR1-206ENST00000397938 MAST1Q9Y2H9 1570 aa22.6■■□□□ 1.21
EWSR1-206ENST00000397938 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
EWSR1-206ENST00000397938 WDR43Q15061 677 aaKnown RBP eCLIP22.59■■□□□ 1.21
EWSR1-206ENST00000397938 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
EWSR1-206ENST00000397938 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.2
EWSR1-206ENST00000397938 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
EWSR1-206ENST00000397938 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
EWSR1-206ENST00000397938 ATP10AO60312 1499 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms