RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ABCA6Q8N139 1617 aa28.11■■■□□ 2.09
PDLIM2-204ENST00000397760 MAGI2Q86UL8 1455 aa28.1■■■□□ 2.09
PDLIM2-204ENST00000397760 UNC13BO14795 1591 aa28.1■■■□□ 2.09
PDLIM2-204ENST00000397760 FOXD1Q16676 465 aa28.08■■■□□ 2.09
PDLIM2-204ENST00000397760 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
PDLIM2-204ENST00000397760 SIN3AQ96ST3 1273 aa28.07■■■□□ 2.08
PDLIM2-204ENST00000397760 PKD2Q13563 968 aa28.06■■■□□ 2.08
PDLIM2-204ENST00000397760 EIF2AK4Q9P2K8 1649 aaKnown RBP28.05■■■□□ 2.08
PDLIM2-204ENST00000397760 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
PDLIM2-204ENST00000397760 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
PDLIM2-204ENST00000397760 ATP10AO60312 1499 aa28■■■□□ 2.07
PDLIM2-204ENST00000397760 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
PDLIM2-204ENST00000397760 KANK1Q14678 1352 aa27.99■■■□□ 2.07
PDLIM2-204ENST00000397760 DEPDC5O75140 1603 aa27.98■■■□□ 2.07
PDLIM2-204ENST00000397760 IQGAP3Q86VI3 1631 aa27.98■■■□□ 2.07
PDLIM2-204ENST00000397760 GGT6Q6P531 493 aa27.95■■■□□ 2.06
PDLIM2-204ENST00000397760 PRDM15P57071 1507 aaPredicted RBP27.93■■■□□ 2.06
PDLIM2-204ENST00000397760 MROH1Q8NDA8 1641 aa27.92■■■□□ 2.06
PDLIM2-204ENST00000397760 RNF17Q9BXT8 1623 aaKnown RBP27.92■■■□□ 2.06
PDLIM2-204ENST00000397760 BCORL1Q5H9F3 1711 aa27.91■■■□□ 2.06
PDLIM2-204ENST00000397760 VWDEQ8N2E2 1590 aa27.91■■■□□ 2.06
PDLIM2-204ENST00000397760 ARHGEF40Q8TER5 1519 aa27.9■■■□□ 2.06
PDLIM2-204ENST00000397760 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.06
PDLIM2-204ENST00000397760 TIMELESSQ9UNS1 1208 aa27.89■■■□□ 2.06
PDLIM2-204ENST00000397760 REREQ9P2R6 1566 aa27.89■■■□□ 2.05
PDLIM2-204ENST00000397760 AGLP35573 1532 aa27.84■■■□□ 2.05
PDLIM2-204ENST00000397760 TONSLQ96HA7 1378 aa27.84■■■□□ 2.05
PDLIM2-204ENST00000397760 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
PDLIM2-204ENST00000397760 ZNF316A6NFI3 1004 aaPredicted RBP27.82■■■□□ 2.04
PDLIM2-204ENST00000397760 LMTK2Q8IWU2 1503 aa27.81■■■□□ 2.04
PDLIM2-204ENST00000397760 RPRD2Q5VT52 1461 aaKnown RBP27.81■■■□□ 2.04
PDLIM2-204ENST00000397760 TET3O43151 1660 aa27.81■■■□□ 2.04
PDLIM2-204ENST00000397760 PLA2R1Q13018 1463 aa27.77■■■□□ 2.04
PDLIM2-204ENST00000397760 ABCC3O15438 1527 aa27.76■■■□□ 2.03
PDLIM2-204ENST00000397760 E9PCH4 1651 aa27.76■■■□□ 2.03
PDLIM2-204ENST00000397760 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
PDLIM2-204ENST00000397760 PPP6R1Q9UPN7 881 aa27.74■■■□□ 2.03
PDLIM2-204ENST00000397760 CEP152O94986 1710 aa27.73■■■□□ 2.03
PDLIM2-204ENST00000397760 SIGLEC1Q9BZZ2 1709 aa27.73■■■□□ 2.03
PDLIM2-204ENST00000397760 CCDC144AA2RUR9 1427 aa27.73■■■□□ 2.03
PDLIM2-204ENST00000397760 ARID4BQ4LE39 1312 aaPredicted RBP27.72■■■□□ 2.03
PDLIM2-204ENST00000397760 MLECQ14165 292 aa27.72■■■□□ 2.03
PDLIM2-204ENST00000397760 PPP1R15AO75807 674 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-204ENST00000397760 PTPRTO14522 1441 aa27.71■■■□□ 2.03
PDLIM2-204ENST00000397760 L3MBTL2Q969R5 705 aa27.7■■■□□ 2.02
PDLIM2-204ENST00000397760 NPATQ14207 1427 aa27.68■■■□□ 2.02
PDLIM2-204ENST00000397760 ZC3H13Q5T200 1668 aaKnown RBP27.66■■■□□ 2.02
PDLIM2-204ENST00000397760 ARHGAP31Q2M1Z3 1444 aa27.64■■■□□ 2.02
PDLIM2-204ENST00000397760 TRPM2O94759 1503 aa27.64■■■□□ 2.02
PDLIM2-204ENST00000397760 CAMSAP1Q5T5Y3 1602 aa27.64■■■□□ 2.01
PDLIM2-204ENST00000397760 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
PDLIM2-204ENST00000397760 SPHKAPQ2M3C7 1700 aa27.62■■■□□ 2.01
PDLIM2-204ENST00000397760 CENPBP07199 599 aaPredicted RBP27.6■■■□□ 2.01
PDLIM2-204ENST00000397760 ESF1Q9H501 851 aaKnown RBP27.6■■■□□ 2.01
PDLIM2-204ENST00000397760 CNTLNQ9NXG0 1405 aa27.56■■■□□ 2
PDLIM2-204ENST00000397760 RGL3Q3MIN7 710 aa27.55■■■□□ 2
PDLIM2-204ENST00000397760 NOS1P29475 1434 aa27.55■■■□□ 2
PDLIM2-204ENST00000397760 CLTCL1P53675 1640 aa27.53■■■□□ 2
PDLIM2-204ENST00000397760 CLTCQ00610 1675 aaKnown RBP27.53■■■□□ 2
PDLIM2-204ENST00000397760 UGGT1Q9NYU2 1555 aa27.51■■□□□ 1.99
PDLIM2-204ENST00000397760 DCAF11Q8TEB1 546 aa27.51■■□□□ 1.99
PDLIM2-204ENST00000397760 SPATA31E1Q6ZUB1 1445 aa27.5■■□□□ 1.99
PDLIM2-204ENST00000397760 FBXO31Q5XUX0 539 aaPredicted RBP27.5■■□□□ 1.99
PDLIM2-204ENST00000397760 ZMYM3Q14202 1370 aa27.49■■□□□ 1.99
PDLIM2-204ENST00000397760 KDM2AQ9Y2K7 1162 aa27.48■■□□□ 1.99
PDLIM2-204ENST00000397760 CFAP65Q6ZU64 1925 aaKnown RBP27.48■■□□□ 1.99
PDLIM2-204ENST00000397760 NBPF8Q3BBV2 869 aa27.47■■□□□ 1.99
PDLIM2-204ENST00000397760 ERVK-7P63135 1459 aa27.45■■□□□ 1.98
PDLIM2-204ENST00000397760 SYNMO15061 1565 aa27.45■■□□□ 1.98
PDLIM2-204ENST00000397760 SLC52A1Q9NWF4 448 aa27.44■■□□□ 1.98
PDLIM2-204ENST00000397760 PREX1Q8TCU6 1659 aa27.43■■□□□ 1.98
PDLIM2-204ENST00000397760 ZNF326Q5BKZ1 582 aaKnown RBP27.43■■□□□ 1.98
PDLIM2-204ENST00000397760 CHGAP10645 457 aaKnown RBP27.42■■□□□ 1.98
PDLIM2-204ENST00000397760 IDI1Q13907 227 aa27.41■■□□□ 1.98
PDLIM2-204ENST00000397760 NEURL4Q96JN8 1562 aa27.4■■□□□ 1.98
PDLIM2-204ENST00000397760 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
PDLIM2-204ENST00000397760 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
PDLIM2-204ENST00000397760 SPATA31D1Q6ZQQ2 1576 aa27.37■■□□□ 1.97
PDLIM2-204ENST00000397760 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
PDLIM2-204ENST00000397760 KIF1BO60333 1816 aa27.36■■□□□ 1.97
PDLIM2-204ENST00000397760 ADGRB3O60242 1522 aa27.35■■□□□ 1.97
PDLIM2-204ENST00000397760 STAC3Q96MF2 364 aa27.35■■□□□ 1.97
PDLIM2-204ENST00000397760 MROH2AA6NES4 1674 aa27.34■■□□□ 1.97
PDLIM2-204ENST00000397760 CEBPAP49715 358 aaPredicted RBP27.32■■□□□ 1.96
PDLIM2-204ENST00000397760 PRAG1Q86YV5 1406 aa27.32■■□□□ 1.96
PDLIM2-204ENST00000397760 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
PDLIM2-204ENST00000397760 TNRQ92752 1358 aa27.29■■□□□ 1.96
PDLIM2-204ENST00000397760 RPGRIP1LQ68CZ1 1315 aa27.29■■□□□ 1.96
PDLIM2-204ENST00000397760 STAG3Q9UJ98 1225 aa27.27■■□□□ 1.96
PDLIM2-204ENST00000397760 RALGAPBQ86X10 1494 aa27.26■■□□□ 1.95
PDLIM2-204ENST00000397760 PLPPR3Q6T4P5 718 aa27.25■■□□□ 1.95
PDLIM2-204ENST00000397760 MADDQ8WXG6 1647 aa27.24■■□□□ 1.95
PDLIM2-204ENST00000397760 EIF4G2P78344 907 aaKnown RBP eCLIP27.23■■□□□ 1.95
PDLIM2-204ENST00000397760 MYOM2P54296 1465 aa27.22■■□□□ 1.95
PDLIM2-204ENST00000397760 TMEM131LA2VDJ0 1609 aa27.22■■□□□ 1.95
PDLIM2-204ENST00000397760 MIER1Q8N108 512 aa27.22■■□□□ 1.95
PDLIM2-204ENST00000397760 C3P01024 1663 aa27.22■■□□□ 1.95
PDLIM2-204ENST00000397760 ADAMTSL3P82987 1691 aa27.22■■□□□ 1.95
PDLIM2-204ENST00000397760 ADGRF5Q8IZF2 1346 aa27.21■■□□□ 1.95
PDLIM2-204ENST00000397760 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms