RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 KDM5CP41229 1560 aa11.46□□□□□ -0.57
LINC00887-201ENST00000397644 TSPY4P0CV99 314 aa11.46□□□□□ -0.57
LINC00887-201ENST00000397644 TSPY10P0CW01 314 aa11.46□□□□□ -0.57
LINC00887-201ENST00000397644 RRBP1Q9P2E9 1410 aaKnown RBP11.45□□□□□ -0.58
LINC00887-201ENST00000397644 CHIC2Q9UKJ5 165 aa11.45□□□□□ -0.58
LINC00887-201ENST00000397644 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
LINC00887-201ENST00000397644 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
LINC00887-201ENST00000397644 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
LINC00887-201ENST00000397644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00887-201ENST00000397644 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
LINC00887-201ENST00000397644 KIDINS220Q9ULH0 1771 aa11.43□□□□□ -0.58
LINC00887-201ENST00000397644 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
LINC00887-201ENST00000397644 YEATS2Q9ULM3 1422 aa11.42□□□□□ -0.58
LINC00887-201ENST00000397644 ZNF518AQ6AHZ1 1483 aa11.41□□□□□ -0.58
LINC00887-201ENST00000397644 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
LINC00887-201ENST00000397644 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
LINC00887-201ENST00000397644 PREX1Q8TCU6 1659 aa11.4□□□□□ -0.58
LINC00887-201ENST00000397644 AFAP1Q8N556 730 aa11.4□□□□□ -0.58
LINC00887-201ENST00000397644 SCAPERQ9BY12 1400 aa11.4□□□□□ -0.58
LINC00887-201ENST00000397644 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.59
LINC00887-201ENST00000397644 PTPRMP28827 1452 aa11.39□□□□□ -0.59
LINC00887-201ENST00000397644 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
LINC00887-201ENST00000397644 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
LINC00887-201ENST00000397644 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 C9orf84Q5VXU9 1444 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 HAX1O00165 279 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 C3P01024 1663 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
LINC00887-201ENST00000397644 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
LINC00887-201ENST00000397644 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
LINC00887-201ENST00000397644 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
LINC00887-201ENST00000397644 CAMSAP2Q08AD1 1489 aa11.37□□□□□ -0.59
LINC00887-201ENST00000397644 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
LINC00887-201ENST00000397644 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
LINC00887-201ENST00000397644 ABCC5O15440 1437 aa11.35□□□□□ -0.59
LINC00887-201ENST00000397644 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
LINC00887-201ENST00000397644 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
LINC00887-201ENST00000397644 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
LINC00887-201ENST00000397644 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
LINC00887-201ENST00000397644 DAPK1P53355 1430 aa11.34□□□□□ -0.59
LINC00887-201ENST00000397644 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
LINC00887-201ENST00000397644 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
LINC00887-201ENST00000397644 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
LINC00887-201ENST00000397644 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
LINC00887-201ENST00000397644 ATP10AO60312 1499 aa11.32□□□□□ -0.6
LINC00887-201ENST00000397644 ANKRD30AQ9BXX3 1397 aa11.31□□□□□ -0.6
LINC00887-201ENST00000397644 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
LINC00887-201ENST00000397644 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
LINC00887-201ENST00000397644 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
LINC00887-201ENST00000397644 PLXNC1O60486 1568 aa11.3□□□□□ -0.6
LINC00887-201ENST00000397644 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
LINC00887-201ENST00000397644 SETD5Q9C0A6 1442 aa11.29□□□□□ -0.6
LINC00887-201ENST00000397644 HRCP23327 699 aa11.29□□□□□ -0.6
LINC00887-201ENST00000397644 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
LINC00887-201ENST00000397644 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
LINC00887-201ENST00000397644 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
LINC00887-201ENST00000397644 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
LINC00887-201ENST00000397644 MLECQ14165 292 aa11.28□□□□□ -0.6
LINC00887-201ENST00000397644 AGLP35573 1532 aa11.27□□□□□ -0.61
LINC00887-201ENST00000397644 EVX2Q03828 476 aa11.27□□□□□ -0.61
LINC00887-201ENST00000397644 ARHGEF5Q12774 1597 aa11.27□□□□□ -0.61
LINC00887-201ENST00000397644 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
LINC00887-201ENST00000397644 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
LINC00887-201ENST00000397644 DNMT1P26358 1616 aaKnown RBP11.26□□□□□ -0.61
LINC00887-201ENST00000397644 ZNF142P52746 1687 aaPredicted RBP11.26□□□□□ -0.61
LINC00887-201ENST00000397644 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
LINC00887-201ENST00000397644 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
LINC00887-201ENST00000397644 RAB3GAP2Q9H2M9 1393 aa11.24□□□□□ -0.61
LINC00887-201ENST00000397644 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
LINC00887-201ENST00000397644 NAIPQ13075 1403 aa11.24□□□□□ -0.61
LINC00887-201ENST00000397644 CEP152O94986 1710 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 KIF3BO15066 747 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 SHANK2Q9UPX8 1470 aa11.23□□□□□ -0.61
LINC00887-201ENST00000397644 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
LINC00887-201ENST00000397644 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
LINC00887-201ENST00000397644 POLR1AO95602 1720 aaPredicted RBP11.21□□□□□ -0.61
LINC00887-201ENST00000397644 ADGRL2O95490 1459 aa11.21□□□□□ -0.61
LINC00887-201ENST00000397644 ANKRD50Q9ULJ7 1429 aa11.21□□□□□ -0.61
LINC00887-201ENST00000397644 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
LINC00887-201ENST00000397644 A2MP01023 1474 aa11.2□□□□□ -0.62
LINC00887-201ENST00000397644 GGT6Q6P531 493 aa11.2□□□□□ -0.62
LINC00887-201ENST00000397644 MAST1Q9Y2H9 1570 aa11.2□□□□□ -0.62
LINC00887-201ENST00000397644 EIF2AK4Q9P2K8 1649 aaKnown RBP11.19□□□□□ -0.62
LINC00887-201ENST00000397644 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
LINC00887-201ENST00000397644 RNF17Q9BXT8 1623 aaKnown RBP11.18□□□□□ -0.62
LINC00887-201ENST00000397644 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
LINC00887-201ENST00000397644 MPHOSPH9Q99550 1183 aa11.18□□□□□ -0.62
LINC00887-201ENST00000397644 NUP155O75694 1391 aa11.17□□□□□ -0.62
LINC00887-201ENST00000397644 UHRF1BP1Q6BDS2 1440 aa11.17□□□□□ -0.62
LINC00887-201ENST00000397644 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
LINC00887-201ENST00000397644 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
LINC00887-201ENST00000397644 CNTLNQ9NXG0 1405 aa11.16□□□□□ -0.62
LINC00887-201ENST00000397644 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
LINC00887-201ENST00000397644 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
LINC00887-201ENST00000397644 KDM5DQ9BY66 1539 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms