RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 ZNF142P52746 1687 aaPredicted RBP15.36■□□□□ 0.05
RFPL3-202ENST00000397468 PTPRTO14522 1441 aa15.35■□□□□ 0.05
RFPL3-202ENST00000397468 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
RFPL3-202ENST00000397468 MBD5Q9P267 1494 aa15.35■□□□□ 0.05
RFPL3-202ENST00000397468 RTEL1-TNFRSF6BF6WH68 1400 aa15.34■□□□□ 0.05
RFPL3-202ENST00000397468 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
RFPL3-202ENST00000397468 CEP170BQ9Y4F5 1589 aaPredicted RBP15.33■□□□□ 0.05
RFPL3-202ENST00000397468 KIF3BO15066 747 aa15.32■□□□□ 0.04
RFPL3-202ENST00000397468 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
RFPL3-202ENST00000397468 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
RFPL3-202ENST00000397468 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
RFPL3-202ENST00000397468 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
RFPL3-202ENST00000397468 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
RFPL3-202ENST00000397468 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
RFPL3-202ENST00000397468 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
RFPL3-202ENST00000397468 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
RFPL3-202ENST00000397468 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
RFPL3-202ENST00000397468 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
RFPL3-202ENST00000397468 APLP2Q06481 763 aa15.28■□□□□ 0.04
RFPL3-202ENST00000397468 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.04
RFPL3-202ENST00000397468 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
RFPL3-202ENST00000397468 PLA2R1Q13018 1463 aa15.27■□□□□ 0.03
RFPL3-202ENST00000397468 PKD2Q13563 968 aa15.26■□□□□ 0.03
RFPL3-202ENST00000397468 A2ML1A8K2U0 1454 aa15.26■□□□□ 0.03
RFPL3-202ENST00000397468 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
RFPL3-202ENST00000397468 LTBP4Q8N2S1 1624 aa15.25■□□□□ 0.03
RFPL3-202ENST00000397468 TNRQ92752 1358 aa15.24■□□□□ 0.03
RFPL3-202ENST00000397468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
RFPL3-202ENST00000397468 DNMT1P26358 1616 aaKnown RBP15.24■□□□□ 0.03
RFPL3-202ENST00000397468 PZPP20742 1482 aa15.23■□□□□ 0.03
RFPL3-202ENST00000397468 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
RFPL3-202ENST00000397468 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
RFPL3-202ENST00000397468 IQSEC2Q5JU85 1478 aa15.22■□□□□ 0.03
RFPL3-202ENST00000397468 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
RFPL3-202ENST00000397468 MAST1Q9Y2H9 1570 aa15.22■□□□□ 0.03
RFPL3-202ENST00000397468 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
RFPL3-202ENST00000397468 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
RFPL3-202ENST00000397468 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.02
RFPL3-202ENST00000397468 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
RFPL3-202ENST00000397468 CFAP65Q6ZU64 1925 aaKnown RBP15.2■□□□□ 0.02
RFPL3-202ENST00000397468 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-202ENST00000397468 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
RFPL3-202ENST00000397468 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
RFPL3-202ENST00000397468 CEP152O94986 1710 aa15.19■□□□□ 0.02
RFPL3-202ENST00000397468 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
RFPL3-202ENST00000397468 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
RFPL3-202ENST00000397468 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
RFPL3-202ENST00000397468 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
RFPL3-202ENST00000397468 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
RFPL3-202ENST00000397468 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
RFPL3-202ENST00000397468 ABCC3O15438 1527 aa15.16■□□□□ 0.02
RFPL3-202ENST00000397468 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
RFPL3-202ENST00000397468 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
RFPL3-202ENST00000397468 ANKLE2Q86XL3 938 aa15.15■□□□□ 0.02
RFPL3-202ENST00000397468 THEMISQ8N1K5 641 aaPredicted RBP15.15■□□□□ 0.02
RFPL3-202ENST00000397468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
RFPL3-202ENST00000397468 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
RFPL3-202ENST00000397468 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
RFPL3-202ENST00000397468 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
RFPL3-202ENST00000397468 IQGAP1P46940 1657 aa15.11■□□□□ 0.01
RFPL3-202ENST00000397468 CPS1P31327 1500 aa15.11■□□□□ 0.01
RFPL3-202ENST00000397468 MROH1Q8NDA8 1641 aa15.1■□□□□ 0.01
RFPL3-202ENST00000397468 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
RFPL3-202ENST00000397468 RRP7BPQ9NSQ0 103 aa15.1■□□□□ 0.01
RFPL3-202ENST00000397468 DEPDC5O75140 1603 aa15.1■□□□□ 0.01
RFPL3-202ENST00000397468 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
RFPL3-202ENST00000397468 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
RFPL3-202ENST00000397468 KANK1Q14678 1352 aa15.09■□□□□ 0.01
RFPL3-202ENST00000397468 DAPK1P53355 1430 aa15.09■□□□□ 0.01
RFPL3-202ENST00000397468 FGD6Q6ZV73 1430 aa15.09■□□□□ 0.01
RFPL3-202ENST00000397468 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
RFPL3-202ENST00000397468 PIP4K2BP78356 416 aa15.07■□□□□ 0
RFPL3-202ENST00000397468 ABCC5O15440 1437 aa15.07■□□□□ 0
RFPL3-202ENST00000397468 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
RFPL3-202ENST00000397468 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
RFPL3-202ENST00000397468 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
RFPL3-202ENST00000397468 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
RFPL3-202ENST00000397468 TOM1O60784 492 aa15.05■□□□□ -0
RFPL3-202ENST00000397468 VWDEQ8N2E2 1590 aa15.03■□□□□ -0
RFPL3-202ENST00000397468 MED14O60244 1454 aa15.03■□□□□ -0
RFPL3-202ENST00000397468 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
RFPL3-202ENST00000397468 SYNMO15061 1565 aa15.01□□□□□ -0.01
RFPL3-202ENST00000397468 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
RFPL3-202ENST00000397468 PIK3C2BO00750 1634 aa15□□□□□ -0.01
RFPL3-202ENST00000397468 EID1Q9Y6B2 187 aa15□□□□□ -0.01
RFPL3-202ENST00000397468 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
RFPL3-202ENST00000397468 ILDR2Q71H61 639 aa14.99□□□□□ -0.01
RFPL3-202ENST00000397468 TXNDC2Q86VQ3 553 aa14.98□□□□□ -0.01
RFPL3-202ENST00000397468 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
RFPL3-202ENST00000397468 HSPA1LP34931 641 aa14.96□□□□□ -0.01
RFPL3-202ENST00000397468 SLIT1O75093 1534 aa14.96□□□□□ -0.02
RFPL3-202ENST00000397468 EFCAB6Q5THR3 1501 aa14.96□□□□□ -0.02
RFPL3-202ENST00000397468 LMTK2Q8IWU2 1503 aa14.94□□□□□ -0.02
RFPL3-202ENST00000397468 SOCS7O14512 581 aa14.94□□□□□ -0.02
RFPL3-202ENST00000397468 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
RFPL3-202ENST00000397468 KDM5AP29375 1690 aaKnown RBP14.93□□□□□ -0.02
RFPL3-202ENST00000397468 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
RFPL3-202ENST00000397468 BCANQ96GW7 911 aa14.93□□□□□ -0.02
RFPL3-202ENST00000397468 ARHGAP23Q9P227 1491 aa14.93□□□□□ -0.02
RFPL3-202ENST00000397468 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms