RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
LMCD1-202ENST00000397386 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
LMCD1-202ENST00000397386 PZPP20742 1482 aa18.6■□□□□ 0.57
LMCD1-202ENST00000397386 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
LMCD1-202ENST00000397386 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
LMCD1-202ENST00000397386 ATP10AO60312 1499 aa18.6■□□□□ 0.57
LMCD1-202ENST00000397386 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
LMCD1-202ENST00000397386 KIF3BO15066 747 aa18.57■□□□□ 0.56
LMCD1-202ENST00000397386 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
LMCD1-202ENST00000397386 ARHGEF40Q8TER5 1519 aa18.56■□□□□ 0.56
LMCD1-202ENST00000397386 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
LMCD1-202ENST00000397386 RNF17Q9BXT8 1623 aaKnown RBP18.56■□□□□ 0.56
LMCD1-202ENST00000397386 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
LMCD1-202ENST00000397386 VWDEQ8N2E2 1590 aa18.54■□□□□ 0.56
LMCD1-202ENST00000397386 AGLP35573 1532 aa18.54■□□□□ 0.56
LMCD1-202ENST00000397386 KANK1Q14678 1352 aa18.54■□□□□ 0.56
LMCD1-202ENST00000397386 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.56
LMCD1-202ENST00000397386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
LMCD1-202ENST00000397386 PKD2Q13563 968 aa18.5■□□□□ 0.55
LMCD1-202ENST00000397386 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
LMCD1-202ENST00000397386 LMTK2Q8IWU2 1503 aa18.48■□□□□ 0.55
LMCD1-202ENST00000397386 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
LMCD1-202ENST00000397386 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
LMCD1-202ENST00000397386 TET3O43151 1660 aa18.46■□□□□ 0.55
LMCD1-202ENST00000397386 GGT6Q6P531 493 aa18.44■□□□□ 0.54
LMCD1-202ENST00000397386 FOXD1Q16676 465 aa18.43■□□□□ 0.54
LMCD1-202ENST00000397386 ZC3H13Q5T200 1668 aaKnown RBP18.42■□□□□ 0.54
LMCD1-202ENST00000397386 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
LMCD1-202ENST00000397386 RPRD2Q5VT52 1461 aaKnown RBP18.41■□□□□ 0.54
LMCD1-202ENST00000397386 ABCC3O15438 1527 aa18.4■□□□□ 0.54
LMCD1-202ENST00000397386 EFCAB6Q5THR3 1501 aa18.4■□□□□ 0.54
LMCD1-202ENST00000397386 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
LMCD1-202ENST00000397386 E9PCH4 1651 aa18.39■□□□□ 0.53
LMCD1-202ENST00000397386 SIGLEC1Q9BZZ2 1709 aa18.39■□□□□ 0.53
LMCD1-202ENST00000397386 PTPRTO14522 1441 aa18.37■□□□□ 0.53
LMCD1-202ENST00000397386 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
LMCD1-202ENST00000397386 CEP152O94986 1710 aa18.37■□□□□ 0.53
LMCD1-202ENST00000397386 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
LMCD1-202ENST00000397386 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
LMCD1-202ENST00000397386 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
LMCD1-202ENST00000397386 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
LMCD1-202ENST00000397386 NPATQ14207 1427 aa18.33■□□□□ 0.53
LMCD1-202ENST00000397386 TONSLQ96HA7 1378 aa18.33■□□□□ 0.53
LMCD1-202ENST00000397386 TRPM2O94759 1503 aa18.33■□□□□ 0.52
LMCD1-202ENST00000397386 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
LMCD1-202ENST00000397386 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
LMCD1-202ENST00000397386 CNTLNQ9NXG0 1405 aa18.29■□□□□ 0.52
LMCD1-202ENST00000397386 NOS1P29475 1434 aa18.28■□□□□ 0.52
LMCD1-202ENST00000397386 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.51
LMCD1-202ENST00000397386 MLECQ14165 292 aa18.26■□□□□ 0.51
LMCD1-202ENST00000397386 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
LMCD1-202ENST00000397386 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
LMCD1-202ENST00000397386 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
LMCD1-202ENST00000397386 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
LMCD1-202ENST00000397386 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
LMCD1-202ENST00000397386 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
LMCD1-202ENST00000397386 ZMYM3Q14202 1370 aa18.21■□□□□ 0.51
LMCD1-202ENST00000397386 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.51
LMCD1-202ENST00000397386 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
LMCD1-202ENST00000397386 SLC52A1Q9NWF4 448 aa18.2■□□□□ 0.5
LMCD1-202ENST00000397386 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
LMCD1-202ENST00000397386 PIK3C2BO00750 1634 aa18.19■□□□□ 0.5
LMCD1-202ENST00000397386 SYNMO15061 1565 aa18.19■□□□□ 0.5
LMCD1-202ENST00000397386 SPATA31D1Q6ZQQ2 1576 aa18.19■□□□□ 0.5
LMCD1-202ENST00000397386 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
LMCD1-202ENST00000397386 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
LMCD1-202ENST00000397386 FER1L4A9Z1Z3 1794 aa18.16■□□□□ 0.5
LMCD1-202ENST00000397386 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
LMCD1-202ENST00000397386 KIF1BO60333 1816 aa18.15■□□□□ 0.5
LMCD1-202ENST00000397386 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
LMCD1-202ENST00000397386 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
LMCD1-202ENST00000397386 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
LMCD1-202ENST00000397386 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
LMCD1-202ENST00000397386 IDI1Q13907 227 aa18.12■□□□□ 0.49
LMCD1-202ENST00000397386 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
LMCD1-202ENST00000397386 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
LMCD1-202ENST00000397386 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
LMCD1-202ENST00000397386 C3P01024 1663 aa18.09■□□□□ 0.49
LMCD1-202ENST00000397386 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
LMCD1-202ENST00000397386 TNRQ92752 1358 aa18.09■□□□□ 0.49
LMCD1-202ENST00000397386 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
LMCD1-202ENST00000397386 MYOM2P54296 1465 aa18.06■□□□□ 0.48
LMCD1-202ENST00000397386 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
LMCD1-202ENST00000397386 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
LMCD1-202ENST00000397386 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
LMCD1-202ENST00000397386 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
LMCD1-202ENST00000397386 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
LMCD1-202ENST00000397386 RIMS1Q86UR5 1692 aaKnown RBP18.04■□□□□ 0.48
LMCD1-202ENST00000397386 IFT172Q9UG01 1749 aa18.04■□□□□ 0.48
LMCD1-202ENST00000397386 CHGAP10645 457 aaKnown RBP18.03■□□□□ 0.48
LMCD1-202ENST00000397386 CEBPAP49715 358 aaPredicted RBP18.03■□□□□ 0.48
LMCD1-202ENST00000397386 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
LMCD1-202ENST00000397386 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
LMCD1-202ENST00000397386 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.47
LMCD1-202ENST00000397386 ZFYVE9O95405 1425 aa18.01■□□□□ 0.47
LMCD1-202ENST00000397386 PPLO60437 1756 aa18■□□□□ 0.47
LMCD1-202ENST00000397386 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
LMCD1-202ENST00000397386 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
LMCD1-202ENST00000397386 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
LMCD1-202ENST00000397386 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms