RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
SMU1-201ENST00000397149 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
SMU1-201ENST00000397149 HSP90AB2PQ58FF8 381 aa15.24■□□□□ 0.03
SMU1-201ENST00000397149 PHF14O94880 888 aa15.24■□□□□ 0.03
SMU1-201ENST00000397149 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
SMU1-201ENST00000397149 NGEFQ8N5V2 710 aa15.24■□□□□ 0.03
SMU1-201ENST00000397149 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
SMU1-201ENST00000397149 FOSBP53539 338 aa15.23■□□□□ 0.03
SMU1-201ENST00000397149 TMF1P82094 1093 aa15.23■□□□□ 0.03
SMU1-201ENST00000397149 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
SMU1-201ENST00000397149 DCAF11Q8TEB1 546 aa15.22■□□□□ 0.03
SMU1-201ENST00000397149 AK7Q96M32 723 aa15.22■□□□□ 0.03
SMU1-201ENST00000397149 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
SMU1-201ENST00000397149 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
SMU1-201ENST00000397149 HMMRO75330 724 aa15.21■□□□□ 0.03
SMU1-201ENST00000397149 SYNE3Q6ZMZ3 975 aa15.21■□□□□ 0.02
SMU1-201ENST00000397149 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
SMU1-201ENST00000397149 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
SMU1-201ENST00000397149 SPAG9O60271 1321 aaKnown RBP15.2■□□□□ 0.02
SMU1-201ENST00000397149 NUTM2FA1L443 756 aa15.2■□□□□ 0.02
SMU1-201ENST00000397149 SMC4Q9NTJ3 1288 aa15.19■□□□□ 0.02
SMU1-201ENST00000397149 TEX35Q5T0J7 233 aa15.19■□□□□ 0.02
SMU1-201ENST00000397149 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
SMU1-201ENST00000397149 CCDC97Q96F63 343 aaPredicted RBP15.19■□□□□ 0.02
SMU1-201ENST00000397149 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
SMU1-201ENST00000397149 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
SMU1-201ENST00000397149 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
SMU1-201ENST00000397149 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
SMU1-201ENST00000397149 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
SMU1-201ENST00000397149 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
SMU1-201ENST00000397149 KDM4AO75164 1064 aa15.18■□□□□ 0.02
SMU1-201ENST00000397149 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
SMU1-201ENST00000397149 HDGFP51858 240 aaKnown RBP15.18■□□□□ 0.02
SMU1-201ENST00000397149 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 AMOTL1Q8IY63 956 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 ST18O60284 1047 aa15.17■□□□□ 0.02
SMU1-201ENST00000397149 TRIM29Q14134 588 aa15.16■□□□□ 0.02
SMU1-201ENST00000397149 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
SMU1-201ENST00000397149 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
SMU1-201ENST00000397149 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
SMU1-201ENST00000397149 H0YHG0 523 aa15.15■□□□□ 0.02
SMU1-201ENST00000397149 PPM1FP49593 454 aaPredicted RBP15.15■□□□□ 0.02
SMU1-201ENST00000397149 NEFHP12036 1026 aa15.15■□□□□ 0.02
SMU1-201ENST00000397149 ANKRD20A12PQ8NF67 263 aa15.15■□□□□ 0.02
SMU1-201ENST00000397149 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
SMU1-201ENST00000397149 CDR1P51861 262 aa15.14■□□□□ 0.01
SMU1-201ENST00000397149 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
SMU1-201ENST00000397149 FYB1O15117 783 aa15.13■□□□□ 0.01
SMU1-201ENST00000397149 EPS15P42566 896 aa15.13■□□□□ 0.01
SMU1-201ENST00000397149 GGT6Q6P531 493 aa15.13■□□□□ 0.01
SMU1-201ENST00000397149 CCDC146Q8IYE0 955 aa15.13■□□□□ 0.01
SMU1-201ENST00000397149 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
SMU1-201ENST00000397149 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
SMU1-201ENST00000397149 OFD1O75665 1012 aa15.11■□□□□ 0.01
SMU1-201ENST00000397149 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
SMU1-201ENST00000397149 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
SMU1-201ENST00000397149 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
SMU1-201ENST00000397149 EVA1CP58658 441 aa15.1■□□□□ 0.01
SMU1-201ENST00000397149 AMPHP49418 695 aa15.1■□□□□ 0.01
SMU1-201ENST00000397149 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
SMU1-201ENST00000397149 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
SMU1-201ENST00000397149 NUTM2DQ5VT03 806 aaPredicted RBP15.09■□□□□ 0.01
SMU1-201ENST00000397149 ELL2O00472 640 aaPredicted RBP15.09■□□□□ 0.01
SMU1-201ENST00000397149 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
SMU1-201ENST00000397149 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
SMU1-201ENST00000397149 PDILTQ8N807 584 aa15.08■□□□□ 0.01
SMU1-201ENST00000397149 CPLX1O14810 134 aa15.08■□□□□ 0
SMU1-201ENST00000397149 NGDNQ8NEJ9 315 aaKnown RBP15.08■□□□□ 0
SMU1-201ENST00000397149 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
SMU1-201ENST00000397149 MNS1Q8NEH6 495 aa15.07■□□□□ 0
SMU1-201ENST00000397149 TSPYL1Q9H0U9 437 aa15.07■□□□□ 0
SMU1-201ENST00000397149 NECTIN2Q92692 538 aa15.07■□□□□ 0
SMU1-201ENST00000397149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
SMU1-201ENST00000397149 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
SMU1-201ENST00000397149 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
SMU1-201ENST00000397149 CCDC173Q0VFZ6 552 aa15.06■□□□□ 0
SMU1-201ENST00000397149 DCTN1Q14203 1278 aa15.06■□□□□ 0
SMU1-201ENST00000397149 MEX3CQ5U5Q3 659 aaKnown RBP15.06■□□□□ 0
SMU1-201ENST00000397149 CPLX2Q6PUV4 134 aaKnown RBP15.06■□□□□ 0
SMU1-201ENST00000397149 HSP90B2PQ58FF3 399 aa15.06■□□□□ 0
SMU1-201ENST00000397149 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
SMU1-201ENST00000397149 WWC2Q6AWC2 1192 aa15.05■□□□□ 0
SMU1-201ENST00000397149 WDR70Q9NW82 654 aa15.05■□□□□ 0
SMU1-201ENST00000397149 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
SMU1-201ENST00000397149 IFT57Q9NWB7 429 aa15.04■□□□□ -0
SMU1-201ENST00000397149 DIAPH3Q9NSV4 1193 aa15.03■□□□□ -0
SMU1-201ENST00000397149 EIF2S2P20042 333 aaKnown RBP15.02■□□□□ -0
SMU1-201ENST00000397149 HOOK1Q9UJC3 728 aaKnown RBP15.02■□□□□ -0
SMU1-201ENST00000397149 PPP1R1BQ9UD71 204 aaPredicted RBP15.02■□□□□ -0
SMU1-201ENST00000397149 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
SMU1-201ENST00000397149 DDX11L8A8MPP1 907 aa15.02□□□□□ -0.01
SMU1-201ENST00000397149 ZRSR2Q15696 482 aaKnown RBP15.02□□□□□ -0.01
SMU1-201ENST00000397149 ERICH2A1L162 156 aa15.02□□□□□ -0.01
SMU1-201ENST00000397149 ENOX2Q16206 610 aaKnown RBP15.02□□□□□ -0.01
SMU1-201ENST00000397149 KANK1Q14678 1352 aa15.02□□□□□ -0.01
SMU1-201ENST00000397149 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
SMU1-201ENST00000397149 ACBD3Q9H3P7 528 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms