RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FKBP8Q14318 412 aa22.9■■□□□ 1.26
TRIM39-205ENST00000396551 TRAPPC8Q9Y2L5 1435 aa22.9■■□□□ 1.26
TRIM39-205ENST00000396551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.261e-6■■■■□ 21.3
TRIM39-205ENST00000396551 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
TRIM39-205ENST00000396551 CCDC144AA2RUR9 1427 aa22.89■■□□□ 1.25
TRIM39-205ENST00000396551 ERBINQ96RT1 1412 aa22.89■■□□□ 1.25
TRIM39-205ENST00000396551 CARD11Q9BXL7 1154 aa22.89■■□□□ 1.25
TRIM39-205ENST00000396551 TRPM1Q7Z4N2 1603 aa22.87■■□□□ 1.25
TRIM39-205ENST00000396551 ARID4BQ4LE39 1312 aaPredicted RBP22.86■■□□□ 1.25
TRIM39-205ENST00000396551 ARAP3Q8WWN8 1544 aa22.85■■□□□ 1.25
TRIM39-205ENST00000396551 PRAG1Q86YV5 1406 aa22.84■■□□□ 1.25
TRIM39-205ENST00000396551 BCANQ96GW7 911 aa22.83■■□□□ 1.25
TRIM39-205ENST00000396551 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
TRIM39-205ENST00000396551 A2MP01023 1474 aa22.83■■□□□ 1.24
TRIM39-205ENST00000396551 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
TRIM39-205ENST00000396551 WDR7Q9Y4E6 1490 aa22.81■■□□□ 1.24
TRIM39-205ENST00000396551 ATP10AO60312 1499 aa22.81■■□□□ 1.24
TRIM39-205ENST00000396551 ZFYVE16Q7Z3T8 1539 aa22.8■■□□□ 1.24
TRIM39-205ENST00000396551 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
TRIM39-205ENST00000396551 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
TRIM39-205ENST00000396551 ABCA9Q8IUA7 1624 aa22.79■■□□□ 1.24
TRIM39-205ENST00000396551 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
TRIM39-205ENST00000396551 RGL3Q3MIN7 710 aa22.78■■□□□ 1.24
TRIM39-205ENST00000396551 NEFLP07196 543 aa22.78■■□□□ 1.24
TRIM39-205ENST00000396551 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
TRIM39-205ENST00000396551 E9PCH4 1651 aa22.76■■□□□ 1.23
TRIM39-205ENST00000396551 AFAP1Q8N556 730 aa22.76■■□□□ 1.23
TRIM39-205ENST00000396551 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
TRIM39-205ENST00000396551 LAMC1P11047 1609 aa22.73■■□□□ 1.23
TRIM39-205ENST00000396551 GPRASP1Q5JY77 1395 aa22.73■■□□□ 1.23
TRIM39-205ENST00000396551 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
TRIM39-205ENST00000396551 INO80Q9ULG1 1556 aaPredicted RBP22.72■■□□□ 1.23
TRIM39-205ENST00000396551 FANCAO15360 1455 aa22.72■■□□□ 1.23
TRIM39-205ENST00000396551 DEPDC5O75140 1603 aa22.72■■□□□ 1.23
TRIM39-205ENST00000396551 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.23
TRIM39-205ENST00000396551 PRDM15P57071 1507 aaPredicted RBP22.7■■□□□ 1.22
TRIM39-205ENST00000396551 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.22
TRIM39-205ENST00000396551 ATP7AQ04656 1500 aa22.69■■□□□ 1.22
TRIM39-205ENST00000396551 ZBED9Q6R2W3 1325 aa22.68■■□□□ 1.22
TRIM39-205ENST00000396551 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
TRIM39-205ENST00000396551 TSHZ2Q9NRE2 1034 aa22.66■■□□□ 1.22
TRIM39-205ENST00000396551 SPHKAPQ2M3C7 1700 aa22.66■■□□□ 1.22
TRIM39-205ENST00000396551 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
TRIM39-205ENST00000396551 TRPM2O94759 1503 aa22.65■■□□□ 1.22
TRIM39-205ENST00000396551 ADGRL1O94910 1474 aa22.64■■□□□ 1.22
TRIM39-205ENST00000396551 CEP152O94986 1710 aa22.64■■□□□ 1.21
TRIM39-205ENST00000396551 PRKCSHP14314 528 aaPredicted RBP22.64■■□□□ 1.21
TRIM39-205ENST00000396551 TET3O43151 1660 aa22.64■■□□□ 1.21
TRIM39-205ENST00000396551 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
TRIM39-205ENST00000396551 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
TRIM39-205ENST00000396551 CLTCL1P53675 1640 aa22.62■■□□□ 1.21
TRIM39-205ENST00000396551 PTPRTO14522 1441 aa22.61■■□□□ 1.21
TRIM39-205ENST00000396551 COL17A1Q9UMD9 1497 aaPredicted RBP22.61■■□□□ 1.21
TRIM39-205ENST00000396551 MADDQ8WXG6 1647 aa22.6■■□□□ 1.21
TRIM39-205ENST00000396551 MROH1Q8NDA8 1641 aa22.59■■□□□ 1.21
TRIM39-205ENST00000396551 TESK2Q96S53 571 aa22.59■■□□□ 1.21
TRIM39-205ENST00000396551 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.2
TRIM39-205ENST00000396551 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
TRIM39-205ENST00000396551 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
TRIM39-205ENST00000396551 PNISRQ8TF01 805 aaKnown RBP22.56■■□□□ 1.2
TRIM39-205ENST00000396551 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
TRIM39-205ENST00000396551 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
TRIM39-205ENST00000396551 KIF3BO15066 747 aa22.53■■□□□ 1.2
TRIM39-205ENST00000396551 MYBBP1AQ9BQG0 1328 aaKnown RBP22.53■■□□□ 1.2
TRIM39-205ENST00000396551 KANK1Q14678 1352 aa22.53■■□□□ 1.2
TRIM39-205ENST00000396551 RALBP1Q15311 655 aa22.52■■□□□ 1.2
TRIM39-205ENST00000396551 OSCARQ8IYS5 282 aa22.52■■□□□ 1.2
TRIM39-205ENST00000396551 TMC1Q8TDI8 760 aa22.52■■□□□ 1.2
TRIM39-205ENST00000396551 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
TRIM39-205ENST00000396551 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
TRIM39-205ENST00000396551 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
TRIM39-205ENST00000396551 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
TRIM39-205ENST00000396551 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
TRIM39-205ENST00000396551 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
TRIM39-205ENST00000396551 SMG6Q86US8 1419 aaKnown RBP22.47■■□□□ 1.19
TRIM39-205ENST00000396551 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
TRIM39-205ENST00000396551 NEURL4Q96JN8 1562 aa22.46■■□□□ 1.19
TRIM39-205ENST00000396551 EFCAB6Q5THR3 1501 aa22.46■■□□□ 1.19
TRIM39-205ENST00000396551 PPRC1Q5VV67 1664 aaKnown RBP22.45■■□□□ 1.18
TRIM39-205ENST00000396551 TMF1P82094 1093 aa22.45■■□□□ 1.18
TRIM39-205ENST00000396551 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRIM39-205ENST00000396551 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
TRIM39-205ENST00000396551 ERICH6BQ5W0A0 696 aa22.44■■□□□ 1.18
TRIM39-205ENST00000396551 CD109Q6YHK3 1445 aa22.43■■□□□ 1.18
TRIM39-205ENST00000396551 KIAA1210Q9ULL0 1709 aa22.42■■□□□ 1.18
TRIM39-205ENST00000396551 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
TRIM39-205ENST00000396551 STAC3Q96MF2 364 aa22.42■■□□□ 1.18
TRIM39-205ENST00000396551 KIF1BO60333 1816 aa22.42■■□□□ 1.18
TRIM39-205ENST00000396551 PANK3Q9H999 370 aa22.42■■□□□ 1.18
TRIM39-205ENST00000396551 POGZQ7Z3K3 1410 aa22.41■■□□□ 1.18
TRIM39-205ENST00000396551 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
TRIM39-205ENST00000396551 LMTK2Q8IWU2 1503 aa22.41■■□□□ 1.18
TRIM39-205ENST00000396551 MROH2AA6NES4 1674 aa22.4■■□□□ 1.18
TRIM39-205ENST00000396551 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
TRIM39-205ENST00000396551 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
TRIM39-205ENST00000396551 IFT172Q9UG01 1749 aa22.4■■□□□ 1.18
TRIM39-205ENST00000396551 NLRP13Q86W25 1043 aa22.4■■□□□ 1.18
TRIM39-205ENST00000396551 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
TRIM39-205ENST00000396551 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.17
TRIM39-205ENST00000396551 ABCA6Q8N139 1617 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms