RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
TRIM39-203ENST00000396547 FANCAO15360 1455 aa13.25□□□□□ -0.29
TRIM39-203ENST00000396547 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
TRIM39-203ENST00000396547 NAIPQ13075 1403 aa13.24□□□□□ -0.29
TRIM39-203ENST00000396547 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 NEFMP07197 916 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
TRIM39-203ENST00000396547 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
TRIM39-203ENST00000396547 POGZQ7Z3K3 1410 aa13.22□□□□□ -0.29
TRIM39-203ENST00000396547 GPATCH8Q9UKJ3 1502 aaKnown RBP13.21□□□□□ -0.29
TRIM39-203ENST00000396547 DENND4BO75064 1496 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-203ENST00000396547 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.3
TRIM39-203ENST00000396547 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.3
TRIM39-203ENST00000396547 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
TRIM39-203ENST00000396547 MLH3Q9UHC1 1453 aa13.19□□□□□ -0.3
TRIM39-203ENST00000396547 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
TRIM39-203ENST00000396547 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
TRIM39-203ENST00000396547 ADAMTSL3P82987 1691 aa13.18□□□□□ -0.3
TRIM39-203ENST00000396547 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
TRIM39-203ENST00000396547 INO80Q9ULG1 1556 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-203ENST00000396547 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
TRIM39-203ENST00000396547 MAST1Q9Y2H9 1570 aa13.18□□□□□ -0.3
TRIM39-203ENST00000396547 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
TRIM39-203ENST00000396547 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
TRIM39-203ENST00000396547 AGLP35573 1532 aa13.17□□□□□ -0.3
TRIM39-203ENST00000396547 ADGRL1O94910 1474 aa13.17□□□□□ -0.3
TRIM39-203ENST00000396547 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
TRIM39-203ENST00000396547 ZFYVE16Q7Z3T8 1539 aa13.16□□□□□ -0.3
TRIM39-203ENST00000396547 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
TRIM39-203ENST00000396547 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 KIDINS220Q9ULH0 1771 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
TRIM39-203ENST00000396547 PDE4AP27815 886 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 ADGBQ8N7X0 1667 aa13.13□□□□□ -0.31
TRIM39-203ENST00000396547 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
TRIM39-203ENST00000396547 SMG6Q86US8 1419 aaKnown RBP13.12□□□□□ -0.31
TRIM39-203ENST00000396547 TCOF1Q13428 1488 aaKnown RBP13.12□□□□□ -0.31
TRIM39-203ENST00000396547 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
TRIM39-203ENST00000396547 PLIN1O60240 522 aa13.12□□□□□ -0.31
TRIM39-203ENST00000396547 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
TRIM39-203ENST00000396547 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
TRIM39-203ENST00000396547 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
TRIM39-203ENST00000396547 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
TRIM39-203ENST00000396547 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
TRIM39-203ENST00000396547 SCAPERQ9BY12 1400 aa13.1□□□□□ -0.31
TRIM39-203ENST00000396547 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
TRIM39-203ENST00000396547 ATP10AO60312 1499 aa13.09□□□□□ -0.31
TRIM39-203ENST00000396547 ZNF644Q9H582 1327 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-203ENST00000396547 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
TRIM39-203ENST00000396547 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
TRIM39-203ENST00000396547 MROH2AA6NES4 1674 aa13.08□□□□□ -0.32
TRIM39-203ENST00000396547 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-203ENST00000396547 SHANK2Q9UPX8 1470 aa13.08□□□□□ -0.32
TRIM39-203ENST00000396547 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
TRIM39-203ENST00000396547 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-203ENST00000396547 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
TRIM39-203ENST00000396547 SYCP2Q9BX26 1530 aa13.07□□□□□ -0.32
TRIM39-203ENST00000396547 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
TRIM39-203ENST00000396547 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
TRIM39-203ENST00000396547 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
TRIM39-203ENST00000396547 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
TRIM39-203ENST00000396547 CAMSAP2Q08AD1 1489 aa13.05□□□□□ -0.32
TRIM39-203ENST00000396547 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
TRIM39-203ENST00000396547 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
TRIM39-203ENST00000396547 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
TRIM39-203ENST00000396547 BACH2Q9BYV9 841 aa13.04□□□□□ -0.32
TRIM39-203ENST00000396547 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
TRIM39-203ENST00000396547 DNMT1P26358 1616 aaKnown RBP13.03□□□□□ -0.32
TRIM39-203ENST00000396547 USP47Q96K76 1375 aa13.03□□□□□ -0.32
TRIM39-203ENST00000396547 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
TRIM39-203ENST00000396547 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.32
TRIM39-203ENST00000396547 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
TRIM39-203ENST00000396547 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
TRIM39-203ENST00000396547 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
TRIM39-203ENST00000396547 FER1L4A9Z1Z3 1794 aa13□□□□□ -0.33
TRIM39-203ENST00000396547 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
TRIM39-203ENST00000396547 PKD2Q13563 968 aa13□□□□□ -0.33
TRIM39-203ENST00000396547 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
TRIM39-203ENST00000396547 CRBNQ96SW2 442 aa13□□□□□ -0.33
TRIM39-203ENST00000396547 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
TRIM39-203ENST00000396547 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
TRIM39-203ENST00000396547 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
TRIM39-203ENST00000396547 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
TRIM39-203ENST00000396547 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
TRIM39-203ENST00000396547 GSE1Q14687 1217 aa12.97□□□□□ -0.33
TRIM39-203ENST00000396547 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
TRIM39-203ENST00000396547 FRAT1Q92837 279 aaPredicted RBP12.97□□□□□ -0.33
TRIM39-203ENST00000396547 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
TRIM39-203ENST00000396547 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms