RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
DDR1-229ENST00000396342 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
DDR1-229ENST00000396342 PLA2R1Q13018 1463 aa25.55■■□□□ 1.68
DDR1-229ENST00000396342 KDM5DQ9BY66 1539 aa25.55■■□□□ 1.68
DDR1-229ENST00000396342 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
DDR1-229ENST00000396342 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
DDR1-229ENST00000396342 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
DDR1-229ENST00000396342 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
DDR1-229ENST00000396342 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
DDR1-229ENST00000396342 MYO3AQ8NEV4 1616 aa25.51■■□□□ 1.67
DDR1-229ENST00000396342 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
DDR1-229ENST00000396342 PZPP20742 1482 aa25.49■■□□□ 1.67
DDR1-229ENST00000396342 IQSEC2Q5JU85 1478 aa25.48■■□□□ 1.67
DDR1-229ENST00000396342 ZNF335Q9H4Z2 1342 aaPredicted RBP25.46■■□□□ 1.67
DDR1-229ENST00000396342 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
DDR1-229ENST00000396342 UBAP1LF5GYI3 381 aa25.44■■□□□ 1.66
DDR1-229ENST00000396342 TCOF1Q13428 1488 aaKnown RBP25.43■■□□□ 1.66
DDR1-229ENST00000396342 NLRP1Q9C000 1473 aa25.43■■□□□ 1.66
DDR1-229ENST00000396342 MAST1Q9Y2H9 1570 aa25.4■■□□□ 1.66
DDR1-229ENST00000396342 RRP7BPQ9NSQ0 103 aa25.4■■□□□ 1.66
DDR1-229ENST00000396342 KANK1Q14678 1352 aa25.4■■□□□ 1.66
DDR1-229ENST00000396342 LTBP4Q8N2S1 1624 aa25.4■■□□□ 1.66
DDR1-229ENST00000396342 KIF15Q9NS87 1388 aa25.39■■□□□ 1.65
DDR1-229ENST00000396342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
DDR1-229ENST00000396342 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
DDR1-229ENST00000396342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
DDR1-229ENST00000396342 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
DDR1-229ENST00000396342 DNMT1P26358 1616 aaKnown RBP25.36■■□□□ 1.65
DDR1-229ENST00000396342 UGGT1Q9NYU2 1555 aa25.35■■□□□ 1.65
DDR1-229ENST00000396342 ANKRD30AQ9BXX3 1397 aa25.34■■□□□ 1.65
DDR1-229ENST00000396342 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
DDR1-229ENST00000396342 STAG3Q9UJ98 1225 aa25.33■■□□□ 1.65
DDR1-229ENST00000396342 ERBINQ96RT1 1412 aa25.32■■□□□ 1.64
DDR1-229ENST00000396342 TOM1O60784 492 aa25.32■■□□□ 1.64
DDR1-229ENST00000396342 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
DDR1-229ENST00000396342 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
DDR1-229ENST00000396342 ABCC3O15438 1527 aa25.32■■□□□ 1.64
DDR1-229ENST00000396342 CHIC2Q9UKJ5 165 aa25.31■■□□□ 1.64
DDR1-229ENST00000396342 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
DDR1-229ENST00000396342 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
DDR1-229ENST00000396342 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
DDR1-229ENST00000396342 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
DDR1-229ENST00000396342 ABCC5O15440 1437 aa25.29■■□□□ 1.64
DDR1-229ENST00000396342 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
DDR1-229ENST00000396342 NPHP4O75161 1426 aaPredicted RBP25.28■■□□□ 1.64
DDR1-229ENST00000396342 DAPK1P53355 1430 aa25.28■■□□□ 1.64
DDR1-229ENST00000396342 PTPN23Q9H3S7 1636 aa25.27■■□□□ 1.64
DDR1-229ENST00000396342 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
DDR1-229ENST00000396342 CPS1P31327 1500 aa25.26■■□□□ 1.63
DDR1-229ENST00000396342 PIP4K2BP78356 416 aa25.23■■□□□ 1.63
DDR1-229ENST00000396342 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
DDR1-229ENST00000396342 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
DDR1-229ENST00000396342 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
DDR1-229ENST00000396342 MED14O60244 1454 aa25.19■■□□□ 1.62
DDR1-229ENST00000396342 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
DDR1-229ENST00000396342 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
DDR1-229ENST00000396342 PRDM15P57071 1507 aaPredicted RBP25.15■■□□□ 1.62
DDR1-229ENST00000396342 NEURL4Q96JN8 1562 aa25.14■■□□□ 1.62
DDR1-229ENST00000396342 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
DDR1-229ENST00000396342 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
DDR1-229ENST00000396342 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
DDR1-229ENST00000396342 BCANQ96GW7 911 aa25.11■■□□□ 1.61
DDR1-229ENST00000396342 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
DDR1-229ENST00000396342 SLC52A1Q9NWF4 448 aa25.09■■□□□ 1.61
DDR1-229ENST00000396342 CEP152O94986 1710 aa25.09■■□□□ 1.61
DDR1-229ENST00000396342 IQGAP1P46940 1657 aa25.07■■□□□ 1.6
DDR1-229ENST00000396342 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
DDR1-229ENST00000396342 LTKP29376 864 aa25.05■■□□□ 1.6
DDR1-229ENST00000396342 HSPA1LP34931 641 aa25.05■■□□□ 1.6
DDR1-229ENST00000396342 IDI1Q13907 227 aa25.05■■□□□ 1.6
DDR1-229ENST00000396342 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
DDR1-229ENST00000396342 VWDEQ8N2E2 1590 aa25.04■■□□□ 1.6
DDR1-229ENST00000396342 ADGRL2O95490 1459 aa25.03■■□□□ 1.6
DDR1-229ENST00000396342 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
DDR1-229ENST00000396342 PPP1R15AO75807 674 aaPredicted RBP25.02■■□□□ 1.6
DDR1-229ENST00000396342 SLIT1O75093 1534 aa25.02■■□□□ 1.6
DDR1-229ENST00000396342 SOCS7O14512 581 aa25.01■■□□□ 1.59
DDR1-229ENST00000396342 ARHGAP23Q9P227 1491 aa25■■□□□ 1.59
DDR1-229ENST00000396342 EFCAB6Q5THR3 1501 aa24.99■■□□□ 1.59
DDR1-229ENST00000396342 ILDR2Q71H61 639 aa24.99■■□□□ 1.59
DDR1-229ENST00000396342 UBR1Q8IWV7 1749 aa24.99■■□□□ 1.59
DDR1-229ENST00000396342 ITGAEP38570 1179 aa24.98■■□□□ 1.59
DDR1-229ENST00000396342 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
DDR1-229ENST00000396342 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
DDR1-229ENST00000396342 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
DDR1-229ENST00000396342 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
DDR1-229ENST00000396342 LRRC7Q96NW7 1537 aa24.96■■□□□ 1.59
DDR1-229ENST00000396342 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
DDR1-229ENST00000396342 SYNMO15061 1565 aa24.93■■□□□ 1.58
DDR1-229ENST00000396342 KCNA6P17658 529 aa24.93■■□□□ 1.58
DDR1-229ENST00000396342 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
DDR1-229ENST00000396342 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
DDR1-229ENST00000396342 SLC26A8Q96RN1 970 aa24.93■■□□□ 1.58
DDR1-229ENST00000396342 NOS1P29475 1434 aa24.93■■□□□ 1.58
DDR1-229ENST00000396342 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
DDR1-229ENST00000396342 PIK3C2BO00750 1634 aa24.92■■□□□ 1.58
DDR1-229ENST00000396342 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
DDR1-229ENST00000396342 NUP155O75694 1391 aa24.86■■□□□ 1.57
DDR1-229ENST00000396342 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
DDR1-229ENST00000396342 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms