RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 PKD2Q13563 968 aa35.02■■■■□ 3.2
PARD6B-202ENST00000396039 KIF3BO15066 747 aa35■■■■□ 3.19
PARD6B-202ENST00000396039 A2ML1A8K2U0 1454 aa34.99■■■■□ 3.19
PARD6B-202ENST00000396039 TCOF1Q13428 1488 aaKnown RBP34.98■■■■□ 3.19
PARD6B-202ENST00000396039 MAST1Q9Y2H9 1570 aa34.98■■■■□ 3.19
PARD6B-202ENST00000396039 PZPP20742 1482 aa34.96■■■■□ 3.19
PARD6B-202ENST00000396039 DNMT1P26358 1616 aaKnown RBP34.94■■■■□ 3.18
PARD6B-202ENST00000396039 MIA2Q96PC5 1412 aa34.93■■■■□ 3.18
PARD6B-202ENST00000396039 LOC105371045A0A1W2PR82 267 aa34.93■■■■□ 3.18
PARD6B-202ENST00000396039 NCKAP5LQ9HCH0 1330 aa34.92■■■■□ 3.18
PARD6B-202ENST00000396039 WASHC2CQ9Y4E1 1318 aa34.91■■■■□ 3.18
PARD6B-202ENST00000396039 ZC3H13Q5T200 1668 aaKnown RBP34.91■■■■□ 3.18
PARD6B-202ENST00000396039 RNF17Q9BXT8 1623 aaKnown RBP34.91■■■■□ 3.18
PARD6B-202ENST00000396039 EIF2AK4Q9P2K8 1649 aaKnown RBP34.91■■■■□ 3.18
PARD6B-202ENST00000396039 POLR1AO95602 1720 aaPredicted RBP34.9■■■■□ 3.18
PARD6B-202ENST00000396039 MYOM3Q5VTT5 1437 aa34.89■■■■□ 3.18
PARD6B-202ENST00000396039 TNRQ92752 1358 aa34.89■■■■□ 3.18
PARD6B-202ENST00000396039 NLRP1Q9C000 1473 aa34.83■■■■□ 3.17
PARD6B-202ENST00000396039 KANK4Q5T7N3 995 aaPredicted RBP34.8■■■■□ 3.16
PARD6B-202ENST00000396039 ZNF335Q9H4Z2 1342 aaPredicted RBP34.79■■■■□ 3.16
PARD6B-202ENST00000396039 FBXO31Q5XUX0 539 aaPredicted RBP34.77■■■■□ 3.16
PARD6B-202ENST00000396039 APLP2Q06481 763 aa34.76■■■■□ 3.16
PARD6B-202ENST00000396039 ABCC3O15438 1527 aa34.76■■■■□ 3.15
PARD6B-202ENST00000396039 DUOX2Q9NRD8 1548 aa34.76■■■■□ 3.15
PARD6B-202ENST00000396039 CROCC2H7BZ55 1655 aa34.75■■■■□ 3.15
PARD6B-202ENST00000396039 UGGT1Q9NYU2 1555 aa34.74■■■■□ 3.15
PARD6B-202ENST00000396039 SHANK2Q9UPX8 1470 aa34.72■■■■□ 3.15
PARD6B-202ENST00000396039 NEURL4Q96JN8 1562 aa34.72■■■■□ 3.15
PARD6B-202ENST00000396039 THEMISQ8N1K5 641 aaPredicted RBP34.72■■■■□ 3.15
PARD6B-202ENST00000396039 SPATA31D1Q6ZQQ2 1576 aa34.71■■■■□ 3.15
PARD6B-202ENST00000396039 DEPDC5O75140 1603 aa34.7■■■■□ 3.14
PARD6B-202ENST00000396039 PTPN23Q9H3S7 1636 aa34.7■■■■□ 3.14
PARD6B-202ENST00000396039 MROH1Q8NDA8 1641 aa34.69■■■■□ 3.14
PARD6B-202ENST00000396039 CEP152O94986 1710 aa34.67■■■■□ 3.14
PARD6B-202ENST00000396039 ANKLE2Q86XL3 938 aa34.67■■■■□ 3.14
PARD6B-202ENST00000396039 CPS1P31327 1500 aa34.66■■■■□ 3.14
PARD6B-202ENST00000396039 ERBINQ96RT1 1412 aa34.64■■■■□ 3.14
PARD6B-202ENST00000396039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.63■■■■□ 3.133e-8■□□□□ 9.1
PARD6B-202ENST00000396039 ERVK-7P63135 1459 aa34.63■■■■□ 3.13
PARD6B-202ENST00000396039 PRDM15P57071 1507 aaPredicted RBP34.61■■■■□ 3.13
PARD6B-202ENST00000396039 MED14O60244 1454 aa34.61■■■■□ 3.13
PARD6B-202ENST00000396039 UBAP1LF5GYI3 381 aa34.61■■■■□ 3.13
PARD6B-202ENST00000396039 KIF15Q9NS87 1388 aa34.61■■■■□ 3.13
PARD6B-202ENST00000396039 DISP3Q9P2K9 1392 aa34.61■■■■□ 3.13
PARD6B-202ENST00000396039 ABCC5O15440 1437 aa34.58■■■■□ 3.13
PARD6B-202ENST00000396039 CFAP65Q6ZU64 1925 aaKnown RBP34.57■■■■□ 3.13
PARD6B-202ENST00000396039 IQGAP1P46940 1657 aa34.57■■■■□ 3.13
PARD6B-202ENST00000396039 NPHP4O75161 1426 aaPredicted RBP34.56■■■■□ 3.12
PARD6B-202ENST00000396039 FGD6Q6ZV73 1430 aa34.56■■■■□ 3.12
PARD6B-202ENST00000396039 DAPK1P53355 1430 aa34.55■■■■□ 3.12
PARD6B-202ENST00000396039 ARHGAP31Q2M1Z3 1444 aa34.53■■■■□ 3.12
PARD6B-202ENST00000396039 UBR1Q8IWV7 1749 aa34.52■■■■□ 3.12
PARD6B-202ENST00000396039 VWDEQ8N2E2 1590 aa34.51■■■■□ 3.12
PARD6B-202ENST00000396039 KANK1Q14678 1352 aa34.48■■■■□ 3.11
PARD6B-202ENST00000396039 ANKRD30AQ9BXX3 1397 aa34.47■■■■□ 3.11
PARD6B-202ENST00000396039 RRP7BPQ9NSQ0 103 aa34.46■■■■□ 3.11
PARD6B-202ENST00000396039 TOM1O60784 492 aa34.43■■■■□ 3.1
PARD6B-202ENST00000396039 SYNMO15061 1565 aa34.41■■■■□ 3.1
PARD6B-202ENST00000396039 SCAF11Q99590 1463 aaKnown RBP34.39■■■■□ 3.1
PARD6B-202ENST00000396039 SLIT1O75093 1534 aa34.39■■■■□ 3.1
PARD6B-202ENST00000396039 LMTK2Q8IWU2 1503 aa34.39■■■■□ 3.1
PARD6B-202ENST00000396039 KDM5AP29375 1690 aaKnown RBP34.38■■■■□ 3.09
PARD6B-202ENST00000396039 ARHGAP23Q9P227 1491 aa34.35■■■■□ 3.09
PARD6B-202ENST00000396039 ADGRL2O95490 1459 aa34.34■■■■□ 3.09
PARD6B-202ENST00000396039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.34■■■■□ 3.09
PARD6B-202ENST00000396039 PIK3C2BO00750 1634 aa34.33■■■■□ 3.09
PARD6B-202ENST00000396039 SCAF1Q9H7N4 1312 aaKnown RBP34.32■■■■□ 3.09
PARD6B-202ENST00000396039 STRCP1A6NGW2 1772 aa34.32■■■■□ 3.08
PARD6B-202ENST00000396039 CHIC2Q9UKJ5 165 aa34.29■■■■□ 3.08
PARD6B-202ENST00000396039 EID1Q9Y6B2 187 aa34.29■■■■□ 3.08
PARD6B-202ENST00000396039 ILDR2Q71H61 639 aa34.28■■■■□ 3.08
PARD6B-202ENST00000396039 EFCAB6Q5THR3 1501 aa34.27■■■■□ 3.08
PARD6B-202ENST00000396039 PIP4K2BP78356 416 aa34.27■■■■□ 3.08
PARD6B-202ENST00000396039 LRRC7Q96NW7 1537 aa34.25■■■■□ 3.07
PARD6B-202ENST00000396039 TXNDC2Q86VQ3 553 aa34.25■■■■□ 3.07
PARD6B-202ENST00000396039 STAG3Q9UJ98 1225 aa34.24■■■■□ 3.07
PARD6B-202ENST00000396039 SOCS7O14512 581 aa34.23■■■■□ 3.07
PARD6B-202ENST00000396039 TMEM2Q9UHN6 1383 aa34.22■■■■□ 3.07
PARD6B-202ENST00000396039 FAM50AQ14320 339 aaKnown RBP34.21■■■■□ 3.07
PARD6B-202ENST00000396039 LTKP29376 864 aa34.19■■■■□ 3.06
PARD6B-202ENST00000396039 HSPA1LP34931 641 aa34.19■■■■□ 3.06
PARD6B-202ENST00000396039 RPRD2Q5VT52 1461 aaKnown RBP34.19■■■■□ 3.06
PARD6B-202ENST00000396039 NOS1P29475 1434 aa34.18■■■■□ 3.06
PARD6B-202ENST00000396039 ALKQ9UM73 1620 aa34.18■■■■□ 3.06
PARD6B-202ENST00000396039 ANKRD50Q9ULJ7 1429 aa34.17■■■■□ 3.06
PARD6B-202ENST00000396039 ADGRB3O60242 1522 aa34.16■■■■□ 3.06
PARD6B-202ENST00000396039 TET3O43151 1660 aa34.14■■■■□ 3.06
PARD6B-202ENST00000396039 IDI1Q13907 227 aa34.12■■■■□ 3.05
PARD6B-202ENST00000396039 SLC52A1Q9NWF4 448 aa34.12■■■■□ 3.05
PARD6B-202ENST00000396039 MED1Q15648 1581 aaPredicted RBP34.11■■■■□ 3.05
PARD6B-202ENST00000396039 GCC2Q8IWJ2 1684 aa34.11■■■■□ 3.05
PARD6B-202ENST00000396039 XIRP1Q702N8 1843 aaKnown RBP34.09■■■■□ 3.05
PARD6B-202ENST00000396039 UNC13BO14795 1591 aa34.08■■■■□ 3.05
PARD6B-202ENST00000396039 ROCK1Q13464 1354 aa34.02■■■■□ 3.04
PARD6B-202ENST00000396039 MYO5BQ9ULV0 1848 aa33.98■■■■□ 3.03
PARD6B-202ENST00000396039 NKTRP30414 1462 aaKnown RBP33.96■■■■□ 3.03
PARD6B-202ENST00000396039 KCNA6P17658 529 aa33.96■■■■□ 3.03
PARD6B-202ENST00000396039 NWD1Q149M9 1564 aa33.96■■■■□ 3.03
PARD6B-202ENST00000396039 IQGAP3Q86VI3 1631 aa33.95■■■■□ 3.03
PARD6B-202ENST00000396039 HDGFP51858 240 aaKnown RBP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms