RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
BDNF-203ENST00000395978 STAC3Q96MF2 364 aa8.59□□□□□ -1.03
BDNF-203ENST00000395978 CAMSAP2Q08AD1 1489 aa8.59□□□□□ -1.03
BDNF-203ENST00000395978 EIF3AQ14152 1382 aaKnown RBP8.59□□□□□ -1.03
BDNF-203ENST00000395978 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
BDNF-203ENST00000395978 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
BDNF-203ENST00000395978 AFAP1Q8N556 730 aa8.58□□□□□ -1.04
BDNF-203ENST00000395978 ARHGAP5Q13017 1502 aa8.58□□□□□ -1.04
BDNF-203ENST00000395978 POGKQ9P215 609 aa8.58□□□□□ -1.04
BDNF-203ENST00000395978 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
BDNF-203ENST00000395978 TCOF1Q13428 1488 aaKnown RBP8.58□□□□□ -1.04
BDNF-203ENST00000395978 RPRD2Q5VT52 1461 aaKnown RBP8.58□□□□□ -1.04
BDNF-203ENST00000395978 CCDC184Q52MB2 194 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 MORC1Q86VD1 984 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 ARHGEF11O15085 1522 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 DISP1Q96F81 1524 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 GPATCH8Q9UKJ3 1502 aaKnown RBP8.57□□□□□ -1.04
BDNF-203ENST00000395978 KIAA0556O60303 1618 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
BDNF-203ENST00000395978 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
BDNF-203ENST00000395978 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
BDNF-203ENST00000395978 NBPF1Q3BBV0 1214 aa8.56□□□□□ -1.04
BDNF-203ENST00000395978 WASHC2CQ9Y4E1 1318 aa8.56□□□□□ -1.04
BDNF-203ENST00000395978 NCBP3Q53F19 620 aaKnown RBP8.55□□□□□ -1.04
BDNF-203ENST00000395978 UPF2Q9HAU5 1272 aaKnown RBP8.55□□□□□ -1.04
BDNF-203ENST00000395978 NBR1Q14596 966 aa8.55□□□□□ -1.04
BDNF-203ENST00000395978 CYB5RLQ6IPT4 315 aa8.55□□□□□ -1.04
BDNF-203ENST00000395978 BCL11AQ9H165 835 aa8.55□□□□□ -1.04
BDNF-203ENST00000395978 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
BDNF-203ENST00000395978 SAFB2Q14151 953 aaKnown RBP eCLIP8.54□□□□□ -1.04
BDNF-203ENST00000395978 CCDC141Q6ZP82 1450 aa8.54□□□□□ -1.04
BDNF-203ENST00000395978 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
BDNF-203ENST00000395978 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
BDNF-203ENST00000395978 RAPGEF6Q8TEU7 1601 aa8.53□□□□□ -1.04
BDNF-203ENST00000395978 PNISRQ8TF01 805 aaKnown RBP8.53□□□□□ -1.04
BDNF-203ENST00000395978 STK26Q9P289 416 aa8.53□□□□□ -1.04
BDNF-203ENST00000395978 TRAK1Q9UPV9 953 aa8.53□□□□□ -1.04
BDNF-203ENST00000395978 ATP10BO94823 1461 aa8.52□□□□□ -1.05
BDNF-203ENST00000395978 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.05
BDNF-203ENST00000395978 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
BDNF-203ENST00000395978 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
BDNF-203ENST00000395978 FRAT1Q92837 279 aaPredicted RBP8.52□□□□□ -1.05
BDNF-203ENST00000395978 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
BDNF-203ENST00000395978 NOP58Q9Y2X3 529 aaKnown RBP8.51□□□□□ -1.05
BDNF-203ENST00000395978 KIF14Q15058 1648 aa8.51□□□□□ -1.05
BDNF-203ENST00000395978 TCERG1O14776 1098 aaKnown RBP8.51□□□□□ -1.05
BDNF-203ENST00000395978 RRP1P56182 461 aaKnown RBP8.51□□□□□ -1.05
BDNF-203ENST00000395978 RGS3P49796 1198 aa8.5□□□□□ -1.05
BDNF-203ENST00000395978 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
BDNF-203ENST00000395978 MLECQ14165 292 aa8.49□□□□□ -1.05
BDNF-203ENST00000395978 NUTM2DQ5VT03 806 aaPredicted RBP8.49□□□□□ -1.05
BDNF-203ENST00000395978 CCDC146Q8IYE0 955 aa8.49□□□□□ -1.05
BDNF-203ENST00000395978 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
BDNF-203ENST00000395978 CLASP1Q7Z460 1538 aa8.49□□□□□ -1.05
BDNF-203ENST00000395978 MAGI3Q5TCQ9 1506 aa8.48□□□□□ -1.05
BDNF-203ENST00000395978 U2AF1L5P0DN76 240 aaPredicted RBP8.48□□□□□ -1.05
BDNF-203ENST00000395978 U2AF1Q01081 240 aaKnown RBP eCLIP8.48□□□□□ -1.05
BDNF-203ENST00000395978 EXOC6Q8TAG9 804 aa8.48□□□□□ -1.05
BDNF-203ENST00000395978 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
BDNF-203ENST00000395978 CFAP70Q5T0N1 1121 aa8.48□□□□□ -1.05
BDNF-203ENST00000395978 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
BDNF-203ENST00000395978 MS4A1P11836 297 aa8.47□□□□□ -1.05
BDNF-203ENST00000395978 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
BDNF-203ENST00000395978 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
BDNF-203ENST00000395978 PLIN1O60240 522 aa8.46□□□□□ -1.05
BDNF-203ENST00000395978 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.05
BDNF-203ENST00000395978 CENPJQ9HC77 1338 aaPredicted RBP8.46□□□□□ -1.05
BDNF-203ENST00000395978 APAF1O14727 1248 aa8.46□□□□□ -1.05
BDNF-203ENST00000395978 ADAMTS8Q9UP79 889 aa8.46□□□□□ -1.06
BDNF-203ENST00000395978 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
BDNF-203ENST00000395978 EVC2Q86UK5 1308 aa8.45□□□□□ -1.06
BDNF-203ENST00000395978 FANCIQ9NVI1 1328 aa8.45□□□□□ -1.06
BDNF-203ENST00000395978 SMG6Q86US8 1419 aaKnown RBP8.45□□□□□ -1.06
BDNF-203ENST00000395978 ERBINQ96RT1 1412 aa8.45□□□□□ -1.06
BDNF-203ENST00000395978 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
BDNF-203ENST00000395978 MYH16Q9H6N6 1097 aa8.45□□□□□ -1.06
BDNF-203ENST00000395978 LAS1LQ9Y4W2 734 aaKnown RBP8.45□□□□□ -1.06
BDNF-203ENST00000395978 CGNL1Q0VF96 1302 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 PPP2R1AP30153 589 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 BECN1Q14457 450 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 ABCC2Q92887 1545 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 E9PSI1 815 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 CDCA7LQ96GN5 454 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
BDNF-203ENST00000395978 PZPP20742 1482 aa8.43□□□□□ -1.06
BDNF-203ENST00000395978 ABCA8O94911 1581 aa8.43□□□□□ -1.06
BDNF-203ENST00000395978 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
BDNF-203ENST00000395978 CRBNQ96SW2 442 aa8.43□□□□□ -1.06
BDNF-203ENST00000395978 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
BDNF-203ENST00000395978 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
BDNF-203ENST00000395978 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
BDNF-203ENST00000395978 TMEM132EQ6IEE7 984 aa8.42□□□□□ -1.06
BDNF-203ENST00000395978 UHRF1BP1LA0JNW5 1464 aa8.41□□□□□ -1.06
BDNF-203ENST00000395978 ADGRL2O95490 1459 aa8.41□□□□□ -1.06
BDNF-203ENST00000395978 SHANK2Q9UPX8 1470 aa8.41□□□□□ -1.06
BDNF-203ENST00000395978 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
BDNF-203ENST00000395978 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
BDNF-203ENST00000395978 CHMP4BQ9H444 224 aaKnown RBP8.41□□□□□ -1.06
BDNF-203ENST00000395978 PLCH2O75038 1416 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms