RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
VCPKMT-201ENST00000395859 ZNF777Q9ULD5 760 aaPredicted RBP22.86■■□□□ 1.25
VCPKMT-201ENST00000395859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
VCPKMT-201ENST00000395859 NPHP4O75161 1426 aaPredicted RBP22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 FBXO31Q5XUX0 539 aaPredicted RBP22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 PZPP20742 1482 aa22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
VCPKMT-201ENST00000395859 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
VCPKMT-201ENST00000395859 SYNMO15061 1565 aa22.81■■□□□ 1.24
VCPKMT-201ENST00000395859 FAM135AQ9P2D6 1515 aa22.8■■□□□ 1.24
VCPKMT-201ENST00000395859 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
VCPKMT-201ENST00000395859 NLRP1Q9C000 1473 aa22.79■■□□□ 1.24
VCPKMT-201ENST00000395859 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
VCPKMT-201ENST00000395859 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
VCPKMT-201ENST00000395859 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
VCPKMT-201ENST00000395859 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
VCPKMT-201ENST00000395859 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
VCPKMT-201ENST00000395859 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
VCPKMT-201ENST00000395859 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
VCPKMT-201ENST00000395859 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
VCPKMT-201ENST00000395859 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
VCPKMT-201ENST00000395859 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
VCPKMT-201ENST00000395859 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
VCPKMT-201ENST00000395859 ZC3H13Q5T200 1668 aaKnown RBP22.72■■□□□ 1.23
VCPKMT-201ENST00000395859 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
VCPKMT-201ENST00000395859 XIRP1Q702N8 1843 aaKnown RBP22.69■■□□□ 1.22
VCPKMT-201ENST00000395859 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
VCPKMT-201ENST00000395859 FAM135BQ49AJ0 1406 aa22.66■■□□□ 1.22
VCPKMT-201ENST00000395859 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
VCPKMT-201ENST00000395859 SRCAPQ6ZRS2 3230 aa22.66■■□□□ 1.22
VCPKMT-201ENST00000395859 KIF3BO15066 747 aa22.65■■□□□ 1.22
VCPKMT-201ENST00000395859 WASHC2CQ9Y4E1 1318 aa22.63■■□□□ 1.21
VCPKMT-201ENST00000395859 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
VCPKMT-201ENST00000395859 TIAM1Q13009 1591 aa22.61■■□□□ 1.21
VCPKMT-201ENST00000395859 NCOA2Q15596 1464 aa22.56■■□□□ 1.2
VCPKMT-201ENST00000395859 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
VCPKMT-201ENST00000395859 ARHGAP23Q9P227 1491 aa22.56■■□□□ 1.2
VCPKMT-201ENST00000395859 UBR1Q8IWV7 1749 aa22.56■■□□□ 1.2
VCPKMT-201ENST00000395859 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
VCPKMT-201ENST00000395859 ABCC3O15438 1527 aa22.53■■□□□ 1.2
VCPKMT-201ENST00000395859 SLIT1O75093 1534 aa22.53■■□□□ 1.2
VCPKMT-201ENST00000395859 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
VCPKMT-201ENST00000395859 LTKP29376 864 aa22.52■■□□□ 1.2
VCPKMT-201ENST00000395859 ROBO1Q9Y6N7 1651 aa22.52■■□□□ 1.2
VCPKMT-201ENST00000395859 UPF1Q92900 1129 aaKnown RBP eCLIP22.49■■□□□ 1.19
VCPKMT-201ENST00000395859 MTUS2Q5JR59 1369 aa22.49■■□□□ 1.19
VCPKMT-201ENST00000395859 MAP3K1Q13233 1512 aa22.48■■□□□ 1.19
VCPKMT-201ENST00000395859 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
VCPKMT-201ENST00000395859 TMEM94Q12767 1356 aa22.46■■□□□ 1.19
VCPKMT-201ENST00000395859 MROH1Q8NDA8 1641 aa22.46■■□□□ 1.19
VCPKMT-201ENST00000395859 RSPH4AQ5TD94 716 aa22.44■■□□□ 1.18
VCPKMT-201ENST00000395859 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
VCPKMT-201ENST00000395859 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
VCPKMT-201ENST00000395859 TXNDC2Q86VQ3 553 aa22.42■■□□□ 1.18
VCPKMT-201ENST00000395859 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
VCPKMT-201ENST00000395859 LRRC9Q6ZRR7 1453 aa22.41■■□□□ 1.18
VCPKMT-201ENST00000395859 JCADQ9P266 1359 aa22.38■■□□□ 1.17
VCPKMT-201ENST00000395859 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-201ENST00000395859 TET3O43151 1660 aa22.36■■□□□ 1.17
VCPKMT-201ENST00000395859 LRP6O75581 1613 aa22.36■■□□□ 1.17
VCPKMT-201ENST00000395859 KCNA6P17658 529 aa22.36■■□□□ 1.17
VCPKMT-201ENST00000395859 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-201ENST00000395859 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 PHLPP1O60346 1717 aa22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 CEP152O94986 1710 aa22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 TMEM2Q9UHN6 1383 aa22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 COL16A1Q07092 1604 aaPredicted RBP22.35■■□□□ 1.17
VCPKMT-201ENST00000395859 NWD1Q149M9 1564 aa22.33■■□□□ 1.17
VCPKMT-201ENST00000395859 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.17
VCPKMT-201ENST00000395859 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
VCPKMT-201ENST00000395859 EID1Q9Y6B2 187 aa22.31■■□□□ 1.16
VCPKMT-201ENST00000395859 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
VCPKMT-201ENST00000395859 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
VCPKMT-201ENST00000395859 KDM5AP29375 1690 aaKnown RBP22.3■■□□□ 1.16
VCPKMT-201ENST00000395859 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 PROSER2Q86WR7 435 aaPredicted RBP22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 SLAIN2Q9P270 581 aa22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 FGD6Q6ZV73 1430 aa22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 CDK12Q9NYV4 1490 aaPredicted RBP22.28■■□□□ 1.16
VCPKMT-201ENST00000395859 ZNF772Q68DY9 489 aaPredicted RBP22.27■■□□□ 1.16
VCPKMT-201ENST00000395859 SPATA31A6Q5VVP1 1343 aa22.27■■□□□ 1.16
VCPKMT-201ENST00000395859 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
VCPKMT-201ENST00000395859 MSH6P52701 1360 aa22.24■■□□□ 1.15
VCPKMT-201ENST00000395859 EFCAB6Q5THR3 1501 aa22.23■■□□□ 1.15
VCPKMT-201ENST00000395859 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
VCPKMT-201ENST00000395859 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
VCPKMT-201ENST00000395859 SHPRHQ149N8 1683 aa22.21■■□□□ 1.15
VCPKMT-201ENST00000395859 AHDC1Q5TGY3 1603 aaPredicted RBP22.19■■□□□ 1.14
VCPKMT-201ENST00000395859 DUOX2Q9NRD8 1548 aa22.18■■□□□ 1.14
VCPKMT-201ENST00000395859 RXRBP28702 533 aa22.18■■□□□ 1.14
VCPKMT-201ENST00000395859 IDI1Q13907 227 aa22.17■■□□□ 1.14
VCPKMT-201ENST00000395859 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
VCPKMT-201ENST00000395859 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
VCPKMT-201ENST00000395859 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
VCPKMT-201ENST00000395859 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
VCPKMT-201ENST00000395859 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms