RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
PTPN20-206ENST00000395722 REREQ9P2R6 1566 aa22.31■■□□□ 1.16
PTPN20-206ENST00000395722 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
PTPN20-206ENST00000395722 ATP10AO60312 1499 aa22.29■■□□□ 1.16
PTPN20-206ENST00000395722 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
PTPN20-206ENST00000395722 NUP155O75694 1391 aa22.28■■□□□ 1.16
PTPN20-206ENST00000395722 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
PTPN20-206ENST00000395722 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
PTPN20-206ENST00000395722 MROH1Q8NDA8 1641 aa22.27■■□□□ 1.16
PTPN20-206ENST00000395722 PRDM15P57071 1507 aaPredicted RBP22.25■■□□□ 1.15
PTPN20-206ENST00000395722 VWDEQ8N2E2 1590 aa22.25■■□□□ 1.15
PTPN20-206ENST00000395722 FAM135AQ9P2D6 1515 aa22.25■■□□□ 1.15
PTPN20-206ENST00000395722 KIF3BO15066 747 aa22.23■■□□□ 1.15
PTPN20-206ENST00000395722 AGLP35573 1532 aa22.23■■□□□ 1.15
PTPN20-206ENST00000395722 SLC4A1APQ9BWU0 796 aaKnown RBP22.21■■□□□ 1.15
PTPN20-206ENST00000395722 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
PTPN20-206ENST00000395722 SIGLEC1Q9BZZ2 1709 aa22.17■■□□□ 1.14
PTPN20-206ENST00000395722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.14
PTPN20-206ENST00000395722 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
PTPN20-206ENST00000395722 KANK1Q14678 1352 aa22.15■■□□□ 1.14
PTPN20-206ENST00000395722 PKD2Q13563 968 aa22.14■■□□□ 1.14
PTPN20-206ENST00000395722 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.14
PTPN20-206ENST00000395722 TET3O43151 1660 aa22.14■■□□□ 1.14
PTPN20-206ENST00000395722 FOXD1Q16676 465 aa22.1■■□□□ 1.13
PTPN20-206ENST00000395722 ABCC3O15438 1527 aa22.1■■□□□ 1.13
PTPN20-206ENST00000395722 CEP152O94986 1710 aa22.09■■□□□ 1.13
PTPN20-206ENST00000395722 E9PCH4 1651 aa22.08■■□□□ 1.13
PTPN20-206ENST00000395722 ZC3H13Q5T200 1668 aaKnown RBP22.08■■□□□ 1.13
PTPN20-206ENST00000395722 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.13
PTPN20-206ENST00000395722 GGT6Q6P531 493 aa22.08■■□□□ 1.12
PTPN20-206ENST00000395722 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
PTPN20-206ENST00000395722 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
PTPN20-206ENST00000395722 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
PTPN20-206ENST00000395722 CAMSAP1Q5T5Y3 1602 aa22.03■■□□□ 1.12
PTPN20-206ENST00000395722 RPRD2Q5VT52 1461 aaKnown RBP22.02■■□□□ 1.12
PTPN20-206ENST00000395722 PTPRTO14522 1441 aa22.01■■□□□ 1.11
PTPN20-206ENST00000395722 WASHC2CQ9Y4E1 1318 aa22.01■■□□□ 1.11
PTPN20-206ENST00000395722 ARHGAP31Q2M1Z3 1444 aa22■■□□□ 1.11
PTPN20-206ENST00000395722 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
PTPN20-206ENST00000395722 NPATQ14207 1427 aa21.98■■□□□ 1.11
PTPN20-206ENST00000395722 SPHKAPQ2M3C7 1700 aa21.98■■□□□ 1.11
PTPN20-206ENST00000395722 TRPM2O94759 1503 aa21.98■■□□□ 1.11
PTPN20-206ENST00000395722 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
PTPN20-206ENST00000395722 CLTCQ00610 1675 aaKnown RBP21.94■■□□□ 1.1
PTPN20-206ENST00000395722 ARID4BQ4LE39 1312 aaPredicted RBP21.93■■□□□ 1.1
PTPN20-206ENST00000395722 CCDC144AA2RUR9 1427 aa21.92■■□□□ 1.1
PTPN20-206ENST00000395722 MLECQ14165 292 aa21.91■■□□□ 1.1
PTPN20-206ENST00000395722 NOS1P29475 1434 aa21.91■■□□□ 1.1
PTPN20-206ENST00000395722 TONSLQ96HA7 1378 aa21.9■■□□□ 1.1
PTPN20-206ENST00000395722 CNTLNQ9NXG0 1405 aa21.9■■□□□ 1.1
PTPN20-206ENST00000395722 CLTCL1P53675 1640 aa21.89■■□□□ 1.09
PTPN20-206ENST00000395722 MROH2AA6NES4 1674 aa21.88■■□□□ 1.09
PTPN20-206ENST00000395722 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
PTPN20-206ENST00000395722 SYNMO15061 1565 aa21.86■■□□□ 1.09
PTPN20-206ENST00000395722 NEURL4Q96JN8 1562 aa21.84■■□□□ 1.09
PTPN20-206ENST00000395722 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
PTPN20-206ENST00000395722 ERVK-7P63135 1459 aa21.84■■□□□ 1.09
PTPN20-206ENST00000395722 SPATA31D1Q6ZQQ2 1576 aa21.83■■□□□ 1.09
PTPN20-206ENST00000395722 CFAP65Q6ZU64 1925 aaKnown RBP21.83■■□□□ 1.08
PTPN20-206ENST00000395722 SPATA31E1Q6ZUB1 1445 aa21.83■■□□□ 1.08
PTPN20-206ENST00000395722 FER1L4A9Z1Z3 1794 aa21.83■■□□□ 1.08
PTPN20-206ENST00000395722 ZMYM3Q14202 1370 aa21.83■■□□□ 1.08
PTPN20-206ENST00000395722 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
PTPN20-206ENST00000395722 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
PTPN20-206ENST00000395722 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
PTPN20-206ENST00000395722 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
PTPN20-206ENST00000395722 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
PTPN20-206ENST00000395722 FBXO31Q5XUX0 539 aaPredicted RBP21.77■■□□□ 1.08
PTPN20-206ENST00000395722 KIF1BO60333 1816 aa21.77■■□□□ 1.07
PTPN20-206ENST00000395722 ADGRB3O60242 1522 aa21.76■■□□□ 1.07
PTPN20-206ENST00000395722 MADDQ8WXG6 1647 aa21.76■■□□□ 1.07
PTPN20-206ENST00000395722 SLC52A1Q9NWF4 448 aa21.75■■□□□ 1.07
PTPN20-206ENST00000395722 C3P01024 1663 aa21.74■■□□□ 1.07
PTPN20-206ENST00000395722 UHRF1BP1Q6BDS2 1440 aa21.71■■□□□ 1.07
PTPN20-206ENST00000395722 RIMS1Q86UR5 1692 aaKnown RBP21.7■■□□□ 1.06
PTPN20-206ENST00000395722 IDI1Q13907 227 aa21.7■■□□□ 1.06
PTPN20-206ENST00000395722 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
PTPN20-206ENST00000395722 TMEM131LA2VDJ0 1609 aa21.68■■□□□ 1.06
PTPN20-206ENST00000395722 TNRQ92752 1358 aa21.68■■□□□ 1.06
PTPN20-206ENST00000395722 IFT172Q9UG01 1749 aa21.67■■□□□ 1.06
PTPN20-206ENST00000395722 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
PTPN20-206ENST00000395722 DCAF11Q8TEB1 546 aa21.66■■□□□ 1.06
PTPN20-206ENST00000395722 STAC3Q96MF2 364 aa21.65■■□□□ 1.06
PTPN20-206ENST00000395722 CEBPAP49715 358 aaPredicted RBP21.64■■□□□ 1.05
PTPN20-206ENST00000395722 PRAG1Q86YV5 1406 aa21.64■■□□□ 1.05
PTPN20-206ENST00000395722 MYOM2P54296 1465 aa21.64■■□□□ 1.05
PTPN20-206ENST00000395722 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
PTPN20-206ENST00000395722 PPLO60437 1756 aa21.62■■□□□ 1.05
PTPN20-206ENST00000395722 NLRP1Q9C000 1473 aa21.62■■□□□ 1.05
PTPN20-206ENST00000395722 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
PTPN20-206ENST00000395722 MYO5BQ9ULV0 1848 aa21.62■■□□□ 1.05
PTPN20-206ENST00000395722 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
PTPN20-206ENST00000395722 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
PTPN20-206ENST00000395722 NEXMIFQ5QGS0 1516 aa21.6■■□□□ 1.05
PTPN20-206ENST00000395722 NRXN1Q9ULB1 1477 aa21.6■■□□□ 1.05
PTPN20-206ENST00000395722 RALGAPBQ86X10 1494 aa21.59■■□□□ 1.05
PTPN20-206ENST00000395722 CHGAP10645 457 aaKnown RBP21.59■■□□□ 1.05
PTPN20-206ENST00000395722 TRPM1Q7Z4N2 1603 aa21.57■■□□□ 1.04
PTPN20-206ENST00000395722 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
PTPN20-206ENST00000395722 PTPRMP28827 1452 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms