RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
PTPN20-205ENST00000395721 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
PTPN20-205ENST00000395721 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
PTPN20-205ENST00000395721 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
PTPN20-205ENST00000395721 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
PTPN20-205ENST00000395721 PTPRTO14522 1441 aa13.66□□□□□ -0.22
PTPN20-205ENST00000395721 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
PTPN20-205ENST00000395721 TCOF1Q13428 1488 aaKnown RBP13.66□□□□□ -0.22
PTPN20-205ENST00000395721 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-205ENST00000395721 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
PTPN20-205ENST00000395721 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
PTPN20-205ENST00000395721 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
PTPN20-205ENST00000395721 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
PTPN20-205ENST00000395721 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
PTPN20-205ENST00000395721 ABCC5O15440 1437 aa13.65□□□□□ -0.22
PTPN20-205ENST00000395721 TNRQ92752 1358 aa13.65□□□□□ -0.22
PTPN20-205ENST00000395721 PZPP20742 1482 aa13.65□□□□□ -0.22
PTPN20-205ENST00000395721 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
PTPN20-205ENST00000395721 DAPK1P53355 1430 aa13.64□□□□□ -0.23
PTPN20-205ENST00000395721 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
PTPN20-205ENST00000395721 CERKQ8TCT0 537 aa13.64□□□□□ -0.23
PTPN20-205ENST00000395721 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
PTPN20-205ENST00000395721 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
PTPN20-205ENST00000395721 PLA2R1Q13018 1463 aa13.62□□□□□ -0.23
PTPN20-205ENST00000395721 ABCC3O15438 1527 aa13.62□□□□□ -0.23
PTPN20-205ENST00000395721 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-205ENST00000395721 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
PTPN20-205ENST00000395721 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
PTPN20-205ENST00000395721 ANKRD30AQ9BXX3 1397 aa13.61□□□□□ -0.23
PTPN20-205ENST00000395721 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
PTPN20-205ENST00000395721 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
PTPN20-205ENST00000395721 PKD2Q13563 968 aa13.6□□□□□ -0.23
PTPN20-205ENST00000395721 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
PTPN20-205ENST00000395721 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
PTPN20-205ENST00000395721 MROH1Q8NDA8 1641 aa13.58□□□□□ -0.23
PTPN20-205ENST00000395721 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
PTPN20-205ENST00000395721 KANK1Q14678 1352 aa13.57□□□□□ -0.24
PTPN20-205ENST00000395721 CEP152O94986 1710 aa13.57□□□□□ -0.24
PTPN20-205ENST00000395721 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-205ENST00000395721 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
PTPN20-205ENST00000395721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN20-205ENST00000395721 SPATA31D1Q6ZQQ2 1576 aa13.55□□□□□ -0.24
PTPN20-205ENST00000395721 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
PTPN20-205ENST00000395721 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-205ENST00000395721 UGGT1Q9NYU2 1555 aa13.53□□□□□ -0.24
PTPN20-205ENST00000395721 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
PTPN20-205ENST00000395721 LTBP4Q8N2S1 1624 aa13.52□□□□□ -0.25
PTPN20-205ENST00000395721 POLR1AO95602 1720 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-205ENST00000395721 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
PTPN20-205ENST00000395721 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
PTPN20-205ENST00000395721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN20-205ENST00000395721 IQSEC2Q5JU85 1478 aa13.5□□□□□ -0.25
PTPN20-205ENST00000395721 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-205ENST00000395721 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
PTPN20-205ENST00000395721 LMTK2Q8IWU2 1503 aa13.48□□□□□ -0.25
PTPN20-205ENST00000395721 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
PTPN20-205ENST00000395721 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
PTPN20-205ENST00000395721 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-205ENST00000395721 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
PTPN20-205ENST00000395721 EFCAB6Q5THR3 1501 aa13.45□□□□□ -0.26
PTPN20-205ENST00000395721 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
PTPN20-205ENST00000395721 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
PTPN20-205ENST00000395721 ITGAEP38570 1179 aa13.44□□□□□ -0.26
PTPN20-205ENST00000395721 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
PTPN20-205ENST00000395721 MED14O60244 1454 aa13.44□□□□□ -0.26
PTPN20-205ENST00000395721 CPS1P31327 1500 aa13.43□□□□□ -0.26
PTPN20-205ENST00000395721 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
PTPN20-205ENST00000395721 PCGF6Q9BYE7 350 aa13.42□□□□□ -0.26
PTPN20-205ENST00000395721 SCAF11Q99590 1463 aaKnown RBP13.42□□□□□ -0.26
PTPN20-205ENST00000395721 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
PTPN20-205ENST00000395721 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
PTPN20-205ENST00000395721 UNC13BO14795 1591 aa13.41□□□□□ -0.26
PTPN20-205ENST00000395721 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
PTPN20-205ENST00000395721 SLIT1O75093 1534 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 TET3O43151 1660 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 NOS1P29475 1434 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
PTPN20-205ENST00000395721 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 SYNMO15061 1565 aa13.4□□□□□ -0.26
PTPN20-205ENST00000395721 IDI1Q13907 227 aa13.38□□□□□ -0.27
PTPN20-205ENST00000395721 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
PTPN20-205ENST00000395721 ADGRB3O60242 1522 aa13.38□□□□□ -0.27
PTPN20-205ENST00000395721 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
PTPN20-205ENST00000395721 GCC2Q8IWJ2 1684 aa13.37□□□□□ -0.27
PTPN20-205ENST00000395721 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
PTPN20-205ENST00000395721 LTKP29376 864 aa13.36□□□□□ -0.27
PTPN20-205ENST00000395721 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
PTPN20-205ENST00000395721 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
PTPN20-205ENST00000395721 NUP155O75694 1391 aa13.35□□□□□ -0.27
PTPN20-205ENST00000395721 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.27
PTPN20-205ENST00000395721 TOM1O60784 492 aa13.33□□□□□ -0.27
PTPN20-205ENST00000395721 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
PTPN20-205ENST00000395721 BCANQ96GW7 911 aa13.32□□□□□ -0.28
PTPN20-205ENST00000395721 E9PCH4 1651 aa13.31□□□□□ -0.28
PTPN20-205ENST00000395721 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
PTPN20-205ENST00000395721 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
PTPN20-205ENST00000395721 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
PTPN20-205ENST00000395721 LRRC7Q96NW7 1537 aa13.3□□□□□ -0.28
PTPN20-205ENST00000395721 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms