RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 VPS8Q8N3P4 1428 aa10.18□□□□□ -0.78
SMARCAD1-203ENST00000394961 LRRC9Q6ZRR7 1453 aa10.18□□□□□ -0.78
SMARCAD1-203ENST00000394961 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
SMARCAD1-203ENST00000394961 SPAG9O60271 1321 aaKnown RBP10.17□□□□□ -0.78
SMARCAD1-203ENST00000394961 ZMYM3Q14202 1370 aa10.17□□□□□ -0.78
SMARCAD1-203ENST00000394961 VWDEQ8N2E2 1590 aa10.17□□□□□ -0.78
SMARCAD1-203ENST00000394961 LMTK2Q8IWU2 1503 aa10.16□□□□□ -0.78
SMARCAD1-203ENST00000394961 MTUS2Q5JR59 1369 aa10.16□□□□□ -0.78
SMARCAD1-203ENST00000394961 UBR1Q8IWV7 1749 aa10.16□□□□□ -0.78
SMARCAD1-203ENST00000394961 DUOX2Q9NRD8 1548 aa10.15□□□□□ -0.78
SMARCAD1-203ENST00000394961 ABCC3O15438 1527 aa10.15□□□□□ -0.79
SMARCAD1-203ENST00000394961 ARHGAP31Q2M1Z3 1444 aa10.14□□□□□ -0.79
SMARCAD1-203ENST00000394961 IQGAP1P46940 1657 aa10.14□□□□□ -0.79
SMARCAD1-203ENST00000394961 PKD2Q13563 968 aa10.14□□□□□ -0.79
SMARCAD1-203ENST00000394961 CEP152O94986 1710 aa10.14□□□□□ -0.79
SMARCAD1-203ENST00000394961 ERBINQ96RT1 1412 aa10.12□□□□□ -0.79
SMARCAD1-203ENST00000394961 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
SMARCAD1-203ENST00000394961 SLIT1O75093 1534 aa10.11□□□□□ -0.79
SMARCAD1-203ENST00000394961 PTPN23Q9H3S7 1636 aa10.11□□□□□ -0.79
SMARCAD1-203ENST00000394961 MYOM3Q5VTT5 1437 aa10.11□□□□□ -0.79
SMARCAD1-203ENST00000394961 ARHGAP23Q9P227 1491 aa10.1□□□□□ -0.79
SMARCAD1-203ENST00000394961 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
SMARCAD1-203ENST00000394961 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
SMARCAD1-203ENST00000394961 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
SMARCAD1-203ENST00000394961 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
SMARCAD1-203ENST00000394961 STRCP1A6NGW2 1772 aa10.08□□□□□ -0.8
SMARCAD1-203ENST00000394961 ERVK-7P63135 1459 aa10.08□□□□□ -0.8
SMARCAD1-203ENST00000394961 XIRP1Q702N8 1843 aaKnown RBP10.08□□□□□ -0.8
SMARCAD1-203ENST00000394961 HSPA2P54652 639 aa10.08□□□□□ -0.8
SMARCAD1-203ENST00000394961 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
SMARCAD1-203ENST00000394961 UNC13BO14795 1591 aa10.07□□□□□ -0.8
SMARCAD1-203ENST00000394961 NWD1Q149M9 1564 aa10.07□□□□□ -0.8
SMARCAD1-203ENST00000394961 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCAD1-203ENST00000394961 TNRQ92752 1358 aa10.06□□□□□ -0.8
SMARCAD1-203ENST00000394961 PIK3C2BO00750 1634 aa10.05□□□□□ -0.8
SMARCAD1-203ENST00000394961 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
SMARCAD1-203ENST00000394961 MLECQ14165 292 aa10.05□□□□□ -0.8
SMARCAD1-203ENST00000394961 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
SMARCAD1-203ENST00000394961 ESF1Q9H501 851 aaKnown RBP10.05□□□□□ -0.8
SMARCAD1-203ENST00000394961 TET3O43151 1660 aa10.04□□□□□ -0.8
SMARCAD1-203ENST00000394961 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
SMARCAD1-203ENST00000394961 RPRD2Q5VT52 1461 aaKnown RBP10.03□□□□□ -0.8
SMARCAD1-203ENST00000394961 ADGRB3O60242 1522 aa10.01□□□□□ -0.81
SMARCAD1-203ENST00000394961 ABCC5O15440 1437 aa10.01□□□□□ -0.81
SMARCAD1-203ENST00000394961 DAPK1P53355 1430 aa10.01□□□□□ -0.81
SMARCAD1-203ENST00000394961 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
SMARCAD1-203ENST00000394961 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
SMARCAD1-203ENST00000394961 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
SMARCAD1-203ENST00000394961 DIP2AQ14689 1571 aa10□□□□□ -0.81
SMARCAD1-203ENST00000394961 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
SMARCAD1-203ENST00000394961 NOS1P29475 1434 aa9.98□□□□□ -0.81
SMARCAD1-203ENST00000394961 CHD2O14647 1828 aaKnown RBP9.98□□□□□ -0.81
SMARCAD1-203ENST00000394961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCAD1-203ENST00000394961 SCAF11Q99590 1463 aaKnown RBP9.97□□□□□ -0.81
SMARCAD1-203ENST00000394961 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SMARCAD1-203ENST00000394961 MED1Q15648 1581 aaPredicted RBP9.96□□□□□ -0.81
SMARCAD1-203ENST00000394961 LRRC7Q96NW7 1537 aa9.96□□□□□ -0.81
SMARCAD1-203ENST00000394961 NKTRP30414 1462 aaKnown RBP9.96□□□□□ -0.82
SMARCAD1-203ENST00000394961 TMEM131LA2VDJ0 1609 aa9.96□□□□□ -0.82
SMARCAD1-203ENST00000394961 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
SMARCAD1-203ENST00000394961 TSPY4P0CV99 314 aa9.95□□□□□ -0.82
SMARCAD1-203ENST00000394961 TSPY10P0CW01 314 aa9.95□□□□□ -0.82
SMARCAD1-203ENST00000394961 THEMISQ8N1K5 641 aaPredicted RBP9.95□□□□□ -0.82
SMARCAD1-203ENST00000394961 MYO5BQ9ULV0 1848 aa9.94□□□□□ -0.82
SMARCAD1-203ENST00000394961 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
SMARCAD1-203ENST00000394961 E9PCH4 1651 aa9.94□□□□□ -0.82
SMARCAD1-203ENST00000394961 ROCK1Q13464 1354 aa9.93□□□□□ -0.82
SMARCAD1-203ENST00000394961 NCOA3Q9Y6Q9 1424 aa9.93□□□□□ -0.82
SMARCAD1-203ENST00000394961 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
SMARCAD1-203ENST00000394961 KIF3BO15066 747 aa9.92□□□□□ -0.82
SMARCAD1-203ENST00000394961 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
SMARCAD1-203ENST00000394961 ANKRD30AQ9BXX3 1397 aa9.92□□□□□ -0.82
SMARCAD1-203ENST00000394961 GGT6Q6P531 493 aa9.91□□□□□ -0.82
SMARCAD1-203ENST00000394961 ANKLE2Q86XL3 938 aa9.91□□□□□ -0.82
SMARCAD1-203ENST00000394961 ZNF335Q9H4Z2 1342 aaPredicted RBP9.91□□□□□ -0.82
SMARCAD1-203ENST00000394961 SPHKAPQ2M3C7 1700 aa9.9□□□□□ -0.82
SMARCAD1-203ENST00000394961 LAMC1P11047 1609 aa9.9□□□□□ -0.82
SMARCAD1-203ENST00000394961 ZFYVE9O95405 1425 aa9.9□□□□□ -0.82
SMARCAD1-203ENST00000394961 KANK1Q14678 1352 aa9.9□□□□□ -0.83
SMARCAD1-203ENST00000394961 TMEM2Q9UHN6 1383 aa9.88□□□□□ -0.83
SMARCAD1-203ENST00000394961 XRN1Q8IZH2 1706 aaKnown RBP9.88□□□□□ -0.83
SMARCAD1-203ENST00000394961 PRAG1Q86YV5 1406 aa9.88□□□□□ -0.83
SMARCAD1-203ENST00000394961 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
SMARCAD1-203ENST00000394961 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
SMARCAD1-203ENST00000394961 CFAP65Q6ZU64 1925 aaKnown RBP9.87□□□□□ -0.83
SMARCAD1-203ENST00000394961 SHPRHQ149N8 1683 aa9.87□□□□□ -0.83
SMARCAD1-203ENST00000394961 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 SOCS7O14512 581 aa9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 PIK3R4Q99570 1358 aa9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 SETD1AO15047 1707 aaKnown RBP9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 NRXN3Q9Y4C0 1643 aa9.86□□□□□ -0.83
SMARCAD1-203ENST00000394961 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
SMARCAD1-203ENST00000394961 ROBO1Q9Y6N7 1651 aa9.85□□□□□ -0.83
SMARCAD1-203ENST00000394961 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
SMARCAD1-203ENST00000394961 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
SMARCAD1-203ENST00000394961 TOM1O60784 492 aa9.84□□□□□ -0.83
SMARCAD1-203ENST00000394961 PLPPR3Q6T4P5 718 aa9.84□□□□□ -0.83
SMARCAD1-203ENST00000394961 TRPM2O94759 1503 aa9.83□□□□□ -0.84
SMARCAD1-203ENST00000394961 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms