RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 KIF15Q9NS87 1388 aa28.92■■■□□ 2.22
TRPT1-202ENST00000394546 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
TRPT1-202ENST00000394546 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
TRPT1-202ENST00000394546 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
TRPT1-202ENST00000394546 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
TRPT1-202ENST00000394546 CHIC2Q9UKJ5 165 aa28.88■■■□□ 2.21
TRPT1-202ENST00000394546 KDM5DQ9BY66 1539 aa28.88■■■□□ 2.21
TRPT1-202ENST00000394546 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
TRPT1-202ENST00000394546 ERBINQ96RT1 1412 aa28.85■■■□□ 2.21
TRPT1-202ENST00000394546 PPARGC1BQ86YN6 1023 aaKnown RBP28.84■■■□□ 2.21
TRPT1-202ENST00000394546 PTPRKQ15262 1439 aa28.84■■■□□ 2.21
TRPT1-202ENST00000394546 RNF17Q9BXT8 1623 aaKnown RBP28.81■■■□□ 2.2
TRPT1-202ENST00000394546 NCOA1Q15788 1441 aa28.81■■■□□ 2.2
TRPT1-202ENST00000394546 DMRT2Q9Y5R5 561 aa28.8■■■□□ 2.2
TRPT1-202ENST00000394546 ADGRL2O95490 1459 aa28.77■■■□□ 2.2
TRPT1-202ENST00000394546 PZPP20742 1482 aa28.77■■■□□ 2.2
TRPT1-202ENST00000394546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
TRPT1-202ENST00000394546 KANK1Q14678 1352 aa28.75■■■□□ 2.19
TRPT1-202ENST00000394546 ZC3H13Q5T200 1668 aaKnown RBP28.73■■■□□ 2.19
TRPT1-202ENST00000394546 ABCC3O15438 1527 aa28.73■■■□□ 2.19
TRPT1-202ENST00000394546 FBXO31Q5XUX0 539 aaPredicted RBP28.72■■■□□ 2.19
TRPT1-202ENST00000394546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.72■■■□□ 2.196e-6■□□□□ 8.3
TRPT1-202ENST00000394546 TNRQ92752 1358 aa28.72■■■□□ 2.19
TRPT1-202ENST00000394546 MROH1Q8NDA8 1641 aa28.68■■■□□ 2.18
TRPT1-202ENST00000394546 ROCK1Q13464 1354 aa28.67■■■□□ 2.18
TRPT1-202ENST00000394546 MYO3AQ8NEV4 1616 aa28.67■■■□□ 2.18
TRPT1-202ENST00000394546 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
TRPT1-202ENST00000394546 ANKRD50Q9ULJ7 1429 aa28.66■■■□□ 2.18
TRPT1-202ENST00000394546 ITGAEP38570 1179 aa28.65■■■□□ 2.18
TRPT1-202ENST00000394546 CEP170BQ9Y4F5 1589 aaPredicted RBP28.65■■■□□ 2.18
TRPT1-202ENST00000394546 A2ML1A8K2U0 1454 aa28.65■■■□□ 2.18
TRPT1-202ENST00000394546 ZNF142P52746 1687 aaPredicted RBP28.63■■■□□ 2.17
TRPT1-202ENST00000394546 DEPDC5O75140 1603 aa28.61■■■□□ 2.17
TRPT1-202ENST00000394546 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
TRPT1-202ENST00000394546 NLRP1Q9C000 1473 aa28.61■■■□□ 2.17
TRPT1-202ENST00000394546 PKD2Q13563 968 aa28.61■■■□□ 2.17
TRPT1-202ENST00000394546 PTPRTO14522 1441 aa28.6■■■□□ 2.17
TRPT1-202ENST00000394546 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
TRPT1-202ENST00000394546 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
TRPT1-202ENST00000394546 STRCQ7RTU9 1775 aa28.59■■■□□ 2.17
TRPT1-202ENST00000394546 PLA2R1Q13018 1463 aa28.59■■■□□ 2.17
TRPT1-202ENST00000394546 THEMISQ8N1K5 641 aaPredicted RBP28.58■■■□□ 2.17
TRPT1-202ENST00000394546 CEP152O94986 1710 aa28.57■■■□□ 2.16
TRPT1-202ENST00000394546 ERVK-7P63135 1459 aa28.56■■■□□ 2.16
TRPT1-202ENST00000394546 SPATA31D1Q6ZQQ2 1576 aa28.56■■■□□ 2.16
TRPT1-202ENST00000394546 LMTK2Q8IWU2 1503 aa28.54■■■□□ 2.16
TRPT1-202ENST00000394546 NCKAP5LQ9HCH0 1330 aa28.53■■■□□ 2.16
TRPT1-202ENST00000394546 VWDEQ8N2E2 1590 aa28.51■■■□□ 2.15
TRPT1-202ENST00000394546 UGGT1Q9NYU2 1555 aa28.49■■■□□ 2.15
TRPT1-202ENST00000394546 ANKLE2Q86XL3 938 aa28.48■■■□□ 2.15
TRPT1-202ENST00000394546 ILDR1Q86SU0 546 aaPredicted RBP28.45■■■□□ 2.14
TRPT1-202ENST00000394546 CERKQ8TCT0 537 aa28.43■■■□□ 2.14
TRPT1-202ENST00000394546 CFAP65Q6ZU64 1925 aaKnown RBP28.43■■■□□ 2.14
TRPT1-202ENST00000394546 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
TRPT1-202ENST00000394546 RPRD2Q5VT52 1461 aaKnown RBP28.41■■■□□ 2.14
TRPT1-202ENST00000394546 FBXO41Q8TF61 875 aa28.41■■■□□ 2.14
TRPT1-202ENST00000394546 STAG3Q9UJ98 1225 aa28.41■■■□□ 2.14
TRPT1-202ENST00000394546 UNC13BO14795 1591 aa28.41■■■□□ 2.14
TRPT1-202ENST00000394546 NUP155O75694 1391 aa28.39■■■□□ 2.14
TRPT1-202ENST00000394546 SLC52A1Q9NWF4 448 aa28.38■■■□□ 2.13
TRPT1-202ENST00000394546 NOS1P29475 1434 aa28.35■■■□□ 2.13
TRPT1-202ENST00000394546 TET3O43151 1660 aa28.35■■■□□ 2.13
TRPT1-202ENST00000394546 IDI1Q13907 227 aa28.34■■■□□ 2.13
TRPT1-202ENST00000394546 EID1Q9Y6B2 187 aa28.33■■■□□ 2.13
TRPT1-202ENST00000394546 POLR1AO95602 1720 aaPredicted RBP28.32■■■□□ 2.12
TRPT1-202ENST00000394546 NAIPQ13075 1403 aa28.31■■■□□ 2.12
TRPT1-202ENST00000394546 UBR1Q8IWV7 1749 aa28.29■■■□□ 2.12
TRPT1-202ENST00000394546 GCC2Q8IWJ2 1684 aa28.29■■■□□ 2.12
TRPT1-202ENST00000394546 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
TRPT1-202ENST00000394546 MED14O60244 1454 aa28.29■■■□□ 2.12
TRPT1-202ENST00000394546 NPHP4O75161 1426 aaPredicted RBP28.29■■■□□ 2.12
TRPT1-202ENST00000394546 TXNDC2Q86VQ3 553 aa28.28■■■□□ 2.12
TRPT1-202ENST00000394546 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
TRPT1-202ENST00000394546 ZNF335Q9H4Z2 1342 aaPredicted RBP28.26■■■□□ 2.11
TRPT1-202ENST00000394546 SYNMO15061 1565 aa28.26■■■□□ 2.11
TRPT1-202ENST00000394546 NEURL4Q96JN8 1562 aa28.26■■■□□ 2.11
TRPT1-202ENST00000394546 PIK3C2BO00750 1634 aa28.25■■■□□ 2.11
TRPT1-202ENST00000394546 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
TRPT1-202ENST00000394546 SLIT1O75093 1534 aa28.24■■■□□ 2.11
TRPT1-202ENST00000394546 KDM5AP29375 1690 aaKnown RBP28.24■■■□□ 2.11
TRPT1-202ENST00000394546 SCAF11Q99590 1463 aaKnown RBP28.24■■■□□ 2.11
TRPT1-202ENST00000394546 LTBP4Q8N2S1 1624 aa28.24■■■□□ 2.11
TRPT1-202ENST00000394546 ARHGAP23Q9P227 1491 aa28.23■■■□□ 2.11
TRPT1-202ENST00000394546 HDGFP51858 240 aaKnown RBP28.21■■■□□ 2.11
TRPT1-202ENST00000394546 TRIM52Q96A61 297 aa28.21■■■□□ 2.11
TRPT1-202ENST00000394546 LTKP29376 864 aa28.2■■■□□ 2.1
TRPT1-202ENST00000394546 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.1
TRPT1-202ENST00000394546 E9PCH4 1651 aa28.19■■■□□ 2.1
TRPT1-202ENST00000394546 ADGRB3O60242 1522 aa28.18■■■□□ 2.1
TRPT1-202ENST00000394546 IQGAP1P46940 1657 aa28.17■■■□□ 2.1
TRPT1-202ENST00000394546 CHGAP10645 457 aaKnown RBP28.15■■■□□ 2.1
TRPT1-202ENST00000394546 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
TRPT1-202ENST00000394546 CPS1P31327 1500 aa28.13■■■□□ 2.09
TRPT1-202ENST00000394546 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.1■■■□□ 2.09
TRPT1-202ENST00000394546 SLC4A1APQ9BWU0 796 aaKnown RBP28.09■■■□□ 2.09
TRPT1-202ENST00000394546 PPP1R15AO75807 674 aaPredicted RBP28.08■■■□□ 2.09
TRPT1-202ENST00000394546 BCANQ96GW7 911 aa28.08■■■□□ 2.09
TRPT1-202ENST00000394546 TMEM131LA2VDJ0 1609 aa28.06■■■□□ 2.08
TRPT1-202ENST00000394546 RIMS2Q9UQ26 1411 aa28.05■■■□□ 2.08
TRPT1-202ENST00000394546 ZFYVE9O95405 1425 aa28.01■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms