RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
GTF2F1-201ENST00000394456 KDM2AQ9Y2K7 1162 aa18.55■□□□□ 0.56
GTF2F1-201ENST00000394456 USP47Q96K76 1375 aa18.53■□□□□ 0.56
GTF2F1-201ENST00000394456 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
GTF2F1-201ENST00000394456 MYT1Q01538 1121 aa18.52■□□□□ 0.56
GTF2F1-201ENST00000394456 UNC13BO14795 1591 aa18.51■□□□□ 0.55
GTF2F1-201ENST00000394456 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
GTF2F1-201ENST00000394456 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
GTF2F1-201ENST00000394456 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
GTF2F1-201ENST00000394456 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
GTF2F1-201ENST00000394456 ASXL2Q76L83 1435 aa18.48■□□□□ 0.55
GTF2F1-201ENST00000394456 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
GTF2F1-201ENST00000394456 FANCAO15360 1455 aa18.46■□□□□ 0.55
GTF2F1-201ENST00000394456 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
GTF2F1-201ENST00000394456 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
GTF2F1-201ENST00000394456 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
GTF2F1-201ENST00000394456 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
GTF2F1-201ENST00000394456 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
GTF2F1-201ENST00000394456 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
GTF2F1-201ENST00000394456 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
GTF2F1-201ENST00000394456 ERBINQ96RT1 1412 aa18.44■□□□□ 0.54
GTF2F1-201ENST00000394456 MSH5O43196 834 aa18.43■□□□□ 0.54
GTF2F1-201ENST00000394456 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
GTF2F1-201ENST00000394456 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
GTF2F1-201ENST00000394456 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
GTF2F1-201ENST00000394456 PLA2R1Q13018 1463 aa18.42■□□□□ 0.54
GTF2F1-201ENST00000394456 RGL3Q3MIN7 710 aa18.42■□□□□ 0.54
GTF2F1-201ENST00000394456 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
GTF2F1-201ENST00000394456 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
GTF2F1-201ENST00000394456 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
GTF2F1-201ENST00000394456 KDM5CP41229 1560 aa18.4■□□□□ 0.54
GTF2F1-201ENST00000394456 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
GTF2F1-201ENST00000394456 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
GTF2F1-201ENST00000394456 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
GTF2F1-201ENST00000394456 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
GTF2F1-201ENST00000394456 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
GTF2F1-201ENST00000394456 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
GTF2F1-201ENST00000394456 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
GTF2F1-201ENST00000394456 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
GTF2F1-201ENST00000394456 INO80Q9ULG1 1556 aaPredicted RBP18.35■□□□□ 0.53
GTF2F1-201ENST00000394456 NBPF1Q3BBV0 1214 aa18.35■□□□□ 0.53
GTF2F1-201ENST00000394456 E9PCH4 1651 aa18.32■□□□□ 0.52
GTF2F1-201ENST00000394456 PNISRQ8TF01 805 aaKnown RBP18.32■□□□□ 0.52
GTF2F1-201ENST00000394456 A2MP01023 1474 aa18.32■□□□□ 0.52
GTF2F1-201ENST00000394456 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
GTF2F1-201ENST00000394456 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
GTF2F1-201ENST00000394456 TMC1Q8TDI8 760 aa18.3■□□□□ 0.52
GTF2F1-201ENST00000394456 KIF3BO15066 747 aa18.3■□□□□ 0.52
GTF2F1-201ENST00000394456 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
GTF2F1-201ENST00000394456 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
GTF2F1-201ENST00000394456 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
GTF2F1-201ENST00000394456 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
GTF2F1-201ENST00000394456 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
GTF2F1-201ENST00000394456 ATP10AO60312 1499 aa18.27■□□□□ 0.52
GTF2F1-201ENST00000394456 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
GTF2F1-201ENST00000394456 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
GTF2F1-201ENST00000394456 SPHKAPQ2M3C7 1700 aa18.25■□□□□ 0.51
GTF2F1-201ENST00000394456 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
GTF2F1-201ENST00000394456 TET3O43151 1660 aa18.23■□□□□ 0.51
GTF2F1-201ENST00000394456 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
GTF2F1-201ENST00000394456 KANK1Q14678 1352 aa18.23■□□□□ 0.51
GTF2F1-201ENST00000394456 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
GTF2F1-201ENST00000394456 MROH1Q8NDA8 1641 aa18.22■□□□□ 0.51
GTF2F1-201ENST00000394456 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
GTF2F1-201ENST00000394456 TRPM2O94759 1503 aa18.21■□□□□ 0.51
GTF2F1-201ENST00000394456 CLTCL1P53675 1640 aa18.21■□□□□ 0.5
GTF2F1-201ENST00000394456 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.5
GTF2F1-201ENST00000394456 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
GTF2F1-201ENST00000394456 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
GTF2F1-201ENST00000394456 CEP152O94986 1710 aa18.19■□□□□ 0.5
GTF2F1-201ENST00000394456 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
GTF2F1-201ENST00000394456 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
GTF2F1-201ENST00000394456 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
GTF2F1-201ENST00000394456 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
GTF2F1-201ENST00000394456 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
GTF2F1-201ENST00000394456 FANCIQ9NVI1 1328 aa18.18■□□□□ 0.5
GTF2F1-201ENST00000394456 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
GTF2F1-201ENST00000394456 PTPRTO14522 1441 aa18.17■□□□□ 0.5
GTF2F1-201ENST00000394456 RAPGEF3O95398 923 aa18.16■□□□□ 0.5
GTF2F1-201ENST00000394456 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
GTF2F1-201ENST00000394456 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
GTF2F1-201ENST00000394456 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
GTF2F1-201ENST00000394456 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
GTF2F1-201ENST00000394456 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
GTF2F1-201ENST00000394456 TESK2Q96S53 571 aa18.15■□□□□ 0.5
GTF2F1-201ENST00000394456 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
GTF2F1-201ENST00000394456 CCDC136Q96JN2 1154 aa18.14■□□□□ 0.49
GTF2F1-201ENST00000394456 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
GTF2F1-201ENST00000394456 PPRC1Q5VV67 1664 aaKnown RBP18.13■□□□□ 0.49
GTF2F1-201ENST00000394456 MADDQ8WXG6 1647 aa18.13■□□□□ 0.49
GTF2F1-201ENST00000394456 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
GTF2F1-201ENST00000394456 GGT6Q6P531 493 aa18.13■□□□□ 0.49
GTF2F1-201ENST00000394456 FRMPD1Q5SYB0 1578 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 RALBP1Q15311 655 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 LAMC1P11047 1609 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 PANK3Q9H999 370 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 EFCAB6Q5THR3 1501 aa18.12■□□□□ 0.49
GTF2F1-201ENST00000394456 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
GTF2F1-201ENST00000394456 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms