RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 PLXNC1O60486 1568 aa33.15■■■□□ 2.9
RARA-203ENST00000394086 KIF15Q9NS87 1388 aa33.14■■■□□ 2.9
RARA-203ENST00000394086 BCORL1Q5H9F3 1711 aa33.14■■■□□ 2.9
RARA-203ENST00000394086 NCOA1Q15788 1441 aa33.11■■■□□ 2.89
RARA-203ENST00000394086 KIF3BO15066 747 aa33.1■■■□□ 2.89
RARA-203ENST00000394086 GGT6Q6P531 493 aa33.08■■■□□ 2.89
RARA-203ENST00000394086 ADGRL2O95490 1459 aa33.07■■■□□ 2.89
RARA-203ENST00000394086 ADAMTSL3P82987 1691 aa33.07■■■□□ 2.88
RARA-203ENST00000394086 DUOX2Q9NRD8 1548 aa33.06■■■□□ 2.88
RARA-203ENST00000394086 SUPT16HQ9Y5B9 1047 aaKnown RBP33.06■■■□□ 2.88
RARA-203ENST00000394086 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
RARA-203ENST00000394086 ROCK1Q13464 1354 aa33.01■■■□□ 2.87
RARA-203ENST00000394086 ESF1Q9H501 851 aaKnown RBP33.01■■■□□ 2.87
RARA-203ENST00000394086 TIMELESSQ9UNS1 1208 aa33■■■□□ 2.87
RARA-203ENST00000394086 RAB3GAP2Q9H2M9 1393 aa33■■■□□ 2.87
RARA-203ENST00000394086 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
RARA-203ENST00000394086 SETD5Q9C0A6 1442 aa32.98■■■□□ 2.87
RARA-203ENST00000394086 ERBINQ96RT1 1412 aa32.97■■■□□ 2.87
RARA-203ENST00000394086 FER1L4A9Z1Z3 1794 aa32.94■■■□□ 2.86
RARA-203ENST00000394086 PLPPR3Q6T4P5 718 aa32.94■■■□□ 2.86
RARA-203ENST00000394086 RIMS1Q86UR5 1692 aaKnown RBP32.94■■■□□ 2.86
RARA-203ENST00000394086 ANKRD50Q9ULJ7 1429 aa32.93■■■□□ 2.86
RARA-203ENST00000394086 PTPRMP28827 1452 aa32.92■■■□□ 2.86
RARA-203ENST00000394086 EIF2AK4Q9P2K8 1649 aaKnown RBP32.92■■■□□ 2.86
RARA-203ENST00000394086 PPP6R1Q9UPN7 881 aa32.91■■■□□ 2.86
RARA-203ENST00000394086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.87■■■□□ 2.859e-7■□□□□ 9.1
RARA-203ENST00000394086 WASHC2CQ9Y4E1 1318 aa32.86■■■□□ 2.85
RARA-203ENST00000394086 CEBPAP49715 358 aaPredicted RBP32.85■■■□□ 2.85
RARA-203ENST00000394086 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
RARA-203ENST00000394086 RNF17Q9BXT8 1623 aaKnown RBP32.84■■■□□ 2.85
RARA-203ENST00000394086 CLTCQ00610 1675 aaKnown RBP32.8■■■□□ 2.84
RARA-203ENST00000394086 ZMYM3Q14202 1370 aa32.79■■■□□ 2.84
RARA-203ENST00000394086 NAIPQ13075 1403 aa32.79■■■□□ 2.84
RARA-203ENST00000394086 MROH1Q8NDA8 1641 aa32.78■■■□□ 2.84
RARA-203ENST00000394086 KDM5DQ9BY66 1539 aa32.77■■■□□ 2.84
RARA-203ENST00000394086 HFM1A2PYH4 1435 aa32.76■■■□□ 2.84
RARA-203ENST00000394086 KANK1Q14678 1352 aa32.75■■■□□ 2.83
RARA-203ENST00000394086 PRDM15P57071 1507 aaPredicted RBP32.74■■■□□ 2.83
RARA-203ENST00000394086 DEPDC5O75140 1603 aa32.73■■■□□ 2.83
RARA-203ENST00000394086 FAM135AQ9P2D6 1515 aa32.72■■■□□ 2.83
RARA-203ENST00000394086 ABCC3O15438 1527 aa32.72■■■□□ 2.83
RARA-203ENST00000394086 MROH2AA6NES4 1674 aa32.71■■■□□ 2.83
RARA-203ENST00000394086 C3P01024 1663 aa32.7■■■□□ 2.83
RARA-203ENST00000394086 GCC2Q8IWJ2 1684 aa32.69■■■□□ 2.82
RARA-203ENST00000394086 ZC3H13Q5T200 1668 aaKnown RBP32.65■■■□□ 2.82
RARA-203ENST00000394086 CEP152O94986 1710 aa32.65■■■□□ 2.82
RARA-203ENST00000394086 NUP155O75694 1391 aa32.64■■■□□ 2.82
RARA-203ENST00000394086 ANP32EQ9BTT0 268 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 UNC13BO14795 1591 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 CCER2I3L3R5 266 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 FBXO31Q5XUX0 539 aaPredicted RBP32.63■■■□□ 2.81
RARA-203ENST00000394086 TSHZ2Q9NRE2 1034 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 VWDEQ8N2E2 1590 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 PZPP20742 1482 aa32.59■■■□□ 2.81
RARA-203ENST00000394086 TRIM52Q96A61 297 aa32.59■■■□□ 2.81
RARA-203ENST00000394086 CAMSAP1Q5T5Y3 1602 aa32.58■■■□□ 2.81
RARA-203ENST00000394086 LMTK2Q8IWU2 1503 aa32.57■■■□□ 2.8
RARA-203ENST00000394086 NPATQ14207 1427 aa32.56■■■□□ 2.8
RARA-203ENST00000394086 PPP1R15AO75807 674 aaPredicted RBP32.55■■■□□ 2.8
RARA-203ENST00000394086 ARHGAP31Q2M1Z3 1444 aa32.52■■■□□ 2.8
RARA-203ENST00000394086 SETD1BQ9UPS6 1966 aaKnown RBP32.51■■■□□ 2.79
RARA-203ENST00000394086 IQGAP3Q86VI3 1631 aa32.51■■■□□ 2.79
RARA-203ENST00000394086 TNRQ92752 1358 aa32.48■■■□□ 2.79
RARA-203ENST00000394086 CFAP65Q6ZU64 1925 aaKnown RBP32.48■■■□□ 2.79
RARA-203ENST00000394086 EFCAB6Q5THR3 1501 aa32.48■■■□□ 2.79
RARA-203ENST00000394086 TET3O43151 1660 aa32.46■■■□□ 2.79
RARA-203ENST00000394086 UHRF1BP1Q6BDS2 1440 aa32.46■■■□□ 2.79
RARA-203ENST00000394086 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
RARA-203ENST00000394086 DDX10Q13206 875 aaKnown RBP32.43■■■□□ 2.78
RARA-203ENST00000394086 PREX1Q8TCU6 1659 aa32.43■■■□□ 2.78
RARA-203ENST00000394086 LMTK3Q96Q04 1460 aa32.43■■■□□ 2.78
RARA-203ENST00000394086 SLC4A1APQ9BWU0 796 aaKnown RBP32.41■■■□□ 2.78
RARA-203ENST00000394086 SPATA31D1Q6ZQQ2 1576 aa32.41■■■□□ 2.78
RARA-203ENST00000394086 SIN3AQ96ST3 1273 aa32.4■■■□□ 2.78
RARA-203ENST00000394086 HSPA2P54652 639 aa32.39■■■□□ 2.78
RARA-203ENST00000394086 RPRD2Q5VT52 1461 aaKnown RBP32.39■■■□□ 2.78
RARA-203ENST00000394086 ANP32CO43423 234 aa32.39■■■□□ 2.78
RARA-203ENST00000394086 NEFLP07196 543 aa32.38■■■□□ 2.77
RARA-203ENST00000394086 E9PCH4 1651 aa32.37■■■□□ 2.77
RARA-203ENST00000394086 MYO3AQ8NEV4 1616 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 PKD2Q13563 968 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 BCL11AQ9H165 835 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 NOS1P29475 1434 aa32.34■■■□□ 2.77
RARA-203ENST00000394086 MPHOSPH9Q99550 1183 aa32.33■■■□□ 2.77
RARA-203ENST00000394086 NLRP1Q9C000 1473 aa32.31■■■□□ 2.76
RARA-203ENST00000394086 TONSLQ96HA7 1378 aa32.31■■■□□ 2.76
RARA-203ENST00000394086 CEP170BQ9Y4F5 1589 aaPredicted RBP32.3■■■□□ 2.76
RARA-203ENST00000394086 A2ML1A8K2U0 1454 aa32.3■■■□□ 2.76
RARA-203ENST00000394086 FKBP8Q14318 412 aa32.29■■■□□ 2.76
RARA-203ENST00000394086 IDI1Q13907 227 aa32.28■■■□□ 2.76
RARA-203ENST00000394086 SYNMO15061 1565 aa32.27■■■□□ 2.76
RARA-203ENST00000394086 FOXD1Q16676 465 aa32.27■■■□□ 2.76
RARA-203ENST00000394086 SLC52A1Q9NWF4 448 aa32.26■■■□□ 2.75
RARA-203ENST00000394086 ZNF142P52746 1687 aaPredicted RBP32.24■■■□□ 2.75
RARA-203ENST00000394086 STAG3Q9UJ98 1225 aa32.22■■■□□ 2.75
RARA-203ENST00000394086 UGGT1Q9NYU2 1555 aa32.21■■■□□ 2.75
RARA-203ENST00000394086 THEMISQ8N1K5 641 aaPredicted RBP32.21■■■□□ 2.75
RARA-203ENST00000394086 PTPRTO14522 1441 aa32.2■■■□□ 2.75
RARA-203ENST00000394086 PIK3C2BO00750 1634 aa32.16■■■□□ 2.74
RARA-203ENST00000394086 SPHKAPQ2M3C7 1700 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms