RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 CEP170BQ9Y4F5 1589 aaPredicted RBP25.12■■□□□ 1.61
MDM2-209ENST00000393412 ZNF142P52746 1687 aaPredicted RBP25.1■■□□□ 1.61
MDM2-209ENST00000393412 KDM5DQ9BY66 1539 aa25.08■■□□□ 1.61
MDM2-209ENST00000393412 PLA2R1Q13018 1463 aa25.08■■□□□ 1.61
MDM2-209ENST00000393412 MIA2Q96PC5 1412 aa25.08■■□□□ 1.61
MDM2-209ENST00000393412 MYOM3Q5VTT5 1437 aa25.07■■□□□ 1.6
MDM2-209ENST00000393412 FBXO31Q5XUX0 539 aaPredicted RBP25.07■■□□□ 1.6
MDM2-209ENST00000393412 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
MDM2-209ENST00000393412 TNRQ92752 1358 aa25.06■■□□□ 1.6
MDM2-209ENST00000393412 A2ML1A8K2U0 1454 aa25.06■■□□□ 1.6
MDM2-209ENST00000393412 PZPP20742 1482 aa25.04■■□□□ 1.6
MDM2-209ENST00000393412 LTBP4Q8N2S1 1624 aa25.03■■□□□ 1.6
MDM2-209ENST00000393412 TCOF1Q13428 1488 aaKnown RBP25■■□□□ 1.59
MDM2-209ENST00000393412 MAST1Q9Y2H9 1570 aa25■■□□□ 1.59
MDM2-209ENST00000393412 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
MDM2-209ENST00000393412 DNMT1P26358 1616 aaKnown RBP24.99■■□□□ 1.59
MDM2-209ENST00000393412 IQSEC2Q5JU85 1478 aa24.98■■□□□ 1.59
MDM2-209ENST00000393412 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
MDM2-209ENST00000393412 THEMISQ8N1K5 641 aaPredicted RBP24.96■■□□□ 1.59
MDM2-209ENST00000393412 ANKLE2Q86XL3 938 aa24.94■■□□□ 1.58
MDM2-209ENST00000393412 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
MDM2-209ENST00000393412 NLRP1Q9C000 1473 aa24.93■■□□□ 1.58
MDM2-209ENST00000393412 EIF2AK4Q9P2K8 1649 aaKnown RBP24.92■■□□□ 1.58
MDM2-209ENST00000393412 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
MDM2-209ENST00000393412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.587e-15■■□□□ 12.9
MDM2-209ENST00000393412 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
MDM2-209ENST00000393412 RRP7BPQ9NSQ0 103 aa24.9■■□□□ 1.58
MDM2-209ENST00000393412 ABCC3O15438 1527 aa24.9■■□□□ 1.58
MDM2-209ENST00000393412 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
MDM2-209ENST00000393412 UBAP1LF5GYI3 381 aa24.89■■□□□ 1.58
MDM2-209ENST00000393412 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
MDM2-209ENST00000393412 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.57
MDM2-209ENST00000393412 UGGT1Q9NYU2 1555 aa24.89■■□□□ 1.57
MDM2-209ENST00000393412 ABCC5O15440 1437 aa24.87■■□□□ 1.57
MDM2-209ENST00000393412 POLR1AO95602 1720 aaPredicted RBP24.86■■□□□ 1.57
MDM2-209ENST00000393412 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
MDM2-209ENST00000393412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.84■■□□□ 1.571e-8■■□□□ 11.6
MDM2-209ENST00000393412 DAPK1P53355 1430 aa24.83■■□□□ 1.57
MDM2-209ENST00000393412 ERBINQ96RT1 1412 aa24.83■■□□□ 1.56
MDM2-209ENST00000393412 DISP3Q9P2K9 1392 aa24.82■■□□□ 1.56
MDM2-209ENST00000393412 ERVK-7P63135 1459 aa24.82■■□□□ 1.56
MDM2-209ENST00000393412 SPATA31D1Q6ZQQ2 1576 aa24.81■■□□□ 1.56
MDM2-209ENST00000393412 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
MDM2-209ENST00000393412 CHIC2Q9UKJ5 165 aa24.81■■□□□ 1.56
MDM2-209ENST00000393412 NEURL4Q96JN8 1562 aa24.81■■□□□ 1.56
MDM2-209ENST00000393412 MROH1Q8NDA8 1641 aa24.8■■□□□ 1.56
MDM2-209ENST00000393412 KANK1Q14678 1352 aa24.8■■□□□ 1.56
MDM2-209ENST00000393412 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
MDM2-209ENST00000393412 CEP152O94986 1710 aa24.79■■□□□ 1.56
MDM2-209ENST00000393412 ANKRD30AQ9BXX3 1397 aa24.79■■□□□ 1.56
MDM2-209ENST00000393412 CPS1P31327 1500 aa24.77■■□□□ 1.56
MDM2-209ENST00000393412 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
MDM2-209ENST00000393412 DEPDC5O75140 1603 aa24.75■■□□□ 1.55
MDM2-209ENST00000393412 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
MDM2-209ENST00000393412 MED14O60244 1454 aa24.75■■□□□ 1.55
MDM2-209ENST00000393412 CFAP65Q6ZU64 1925 aaKnown RBP24.75■■□□□ 1.55
MDM2-209ENST00000393412 PRDM15P57071 1507 aaPredicted RBP24.75■■□□□ 1.55
MDM2-209ENST00000393412 TOM1O60784 492 aa24.73■■□□□ 1.55
MDM2-209ENST00000393412 ARHGAP31Q2M1Z3 1444 aa24.73■■□□□ 1.55
MDM2-209ENST00000393412 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
MDM2-209ENST00000393412 PIP4K2BP78356 416 aa24.7■■□□□ 1.55
MDM2-209ENST00000393412 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
MDM2-209ENST00000393412 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
MDM2-209ENST00000393412 VWDEQ8N2E2 1590 aa24.68■■□□□ 1.54
MDM2-209ENST00000393412 TXNDC2Q86VQ3 553 aa24.68■■□□□ 1.54
MDM2-209ENST00000393412 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
MDM2-209ENST00000393412 ADGRL2O95490 1459 aa24.65■■□□□ 1.54
MDM2-209ENST00000393412 SCAF11Q99590 1463 aaKnown RBP24.65■■□□□ 1.54
MDM2-209ENST00000393412 LTKP29376 864 aa24.61■■□□□ 1.53
MDM2-209ENST00000393412 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
MDM2-209ENST00000393412 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
MDM2-209ENST00000393412 LMTK2Q8IWU2 1503 aa24.6■■□□□ 1.53
MDM2-209ENST00000393412 SLIT1O75093 1534 aa24.59■■□□□ 1.53
MDM2-209ENST00000393412 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.53
MDM2-209ENST00000393412 HSPA1LP34931 641 aa24.58■■□□□ 1.53
MDM2-209ENST00000393412 IDI1Q13907 227 aa24.58■■□□□ 1.53
MDM2-209ENST00000393412 ANKRD50Q9ULJ7 1429 aa24.58■■□□□ 1.52
MDM2-209ENST00000393412 PIK3C2BO00750 1634 aa24.57■■□□□ 1.52
MDM2-209ENST00000393412 TMEM2Q9UHN6 1383 aa24.57■■□□□ 1.52
MDM2-209ENST00000393412 EFCAB6Q5THR3 1501 aa24.54■■□□□ 1.52
MDM2-209ENST00000393412 LRRC7Q96NW7 1537 aa24.54■■□□□ 1.52
MDM2-209ENST00000393412 SLC52A1Q9NWF4 448 aa24.53■■□□□ 1.52
MDM2-209ENST00000393412 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
MDM2-209ENST00000393412 SYNMO15061 1565 aa24.52■■□□□ 1.52
MDM2-209ENST00000393412 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
MDM2-209ENST00000393412 STRCP1A6NGW2 1772 aa24.51■■□□□ 1.51
MDM2-209ENST00000393412 BCANQ96GW7 911 aa24.5■■□□□ 1.51
MDM2-209ENST00000393412 NOS1P29475 1434 aa24.5■■□□□ 1.51
MDM2-209ENST00000393412 SOCS7O14512 581 aa24.49■■□□□ 1.51
MDM2-209ENST00000393412 KDM5AP29375 1690 aaKnown RBP24.48■■□□□ 1.51
MDM2-209ENST00000393412 RPRD2Q5VT52 1461 aaKnown RBP24.48■■□□□ 1.51
MDM2-209ENST00000393412 ITGAEP38570 1179 aa24.46■■□□□ 1.51
MDM2-209ENST00000393412 SLC26A8Q96RN1 970 aa24.44■■□□□ 1.5
MDM2-209ENST00000393412 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
MDM2-209ENST00000393412 HDGFP51858 240 aaKnown RBP24.44■■□□□ 1.5
MDM2-209ENST00000393412 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
MDM2-209ENST00000393412 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
MDM2-209ENST00000393412 TET3O43151 1660 aa24.42■■□□□ 1.5
MDM2-209ENST00000393412 ALKQ9UM73 1620 aa24.41■■□□□ 1.5
MDM2-209ENST00000393412 KCNA6P17658 529 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms