RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
CTSC-202ENST00000393301 PZPP20742 1482 aa19.66■□□□□ 0.74
CTSC-202ENST00000393301 GGT6Q6P531 493 aa19.65■□□□□ 0.74
CTSC-202ENST00000393301 A2ML1A8K2U0 1454 aa19.65■□□□□ 0.74
CTSC-202ENST00000393301 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
CTSC-202ENST00000393301 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
CTSC-202ENST00000393301 DNMT1P26358 1616 aaKnown RBP19.63■□□□□ 0.73
CTSC-202ENST00000393301 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
CTSC-202ENST00000393301 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
CTSC-202ENST00000393301 PKD2Q13563 968 aa19.61■□□□□ 0.73
CTSC-202ENST00000393301 KIF3BO15066 747 aa19.58■□□□□ 0.72
CTSC-202ENST00000393301 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
CTSC-202ENST00000393301 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
CTSC-202ENST00000393301 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
CTSC-202ENST00000393301 SHANK2Q9UPX8 1470 aa19.58■□□□□ 0.72
CTSC-202ENST00000393301 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
CTSC-202ENST00000393301 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
CTSC-202ENST00000393301 TNRQ92752 1358 aa19.57■□□□□ 0.72
CTSC-202ENST00000393301 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
CTSC-202ENST00000393301 NLRP1Q9C000 1473 aa19.56■□□□□ 0.72
CTSC-202ENST00000393301 ABCC3O15438 1527 aa19.56■□□□□ 0.72
CTSC-202ENST00000393301 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
CTSC-202ENST00000393301 NEURL4Q96JN8 1562 aa19.54■□□□□ 0.72
CTSC-202ENST00000393301 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
CTSC-202ENST00000393301 NCKAP5LQ9HCH0 1330 aa19.52■□□□□ 0.72
CTSC-202ENST00000393301 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
CTSC-202ENST00000393301 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
CTSC-202ENST00000393301 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
CTSC-202ENST00000393301 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
CTSC-202ENST00000393301 MED14O60244 1454 aa19.49■□□□□ 0.71
CTSC-202ENST00000393301 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
CTSC-202ENST00000393301 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
CTSC-202ENST00000393301 ABCC5O15440 1437 aa19.48■□□□□ 0.71
CTSC-202ENST00000393301 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
CTSC-202ENST00000393301 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
CTSC-202ENST00000393301 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
CTSC-202ENST00000393301 ZNF335Q9H4Z2 1342 aaPredicted RBP19.46■□□□□ 0.71
CTSC-202ENST00000393301 CEP152O94986 1710 aa19.45■□□□□ 0.7
CTSC-202ENST00000393301 FGD6Q6ZV73 1430 aa19.45■□□□□ 0.7
CTSC-202ENST00000393301 CPS1P31327 1500 aa19.44■□□□□ 0.7
CTSC-202ENST00000393301 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
CTSC-202ENST00000393301 DAPK1P53355 1430 aa19.43■□□□□ 0.7
CTSC-202ENST00000393301 VWDEQ8N2E2 1590 aa19.42■□□□□ 0.7
CTSC-202ENST00000393301 THEMISQ8N1K5 641 aaPredicted RBP19.42■□□□□ 0.7
CTSC-202ENST00000393301 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
CTSC-202ENST00000393301 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
CTSC-202ENST00000393301 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
CTSC-202ENST00000393301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.698e-9■□□□□ 8.6
CTSC-202ENST00000393301 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
CTSC-202ENST00000393301 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
CTSC-202ENST00000393301 KDM5AP29375 1690 aaKnown RBP19.37■□□□□ 0.69
CTSC-202ENST00000393301 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
CTSC-202ENST00000393301 APLP2Q06481 763 aa19.37■□□□□ 0.69
CTSC-202ENST00000393301 SLIT1O75093 1534 aa19.36■□□□□ 0.69
CTSC-202ENST00000393301 ARHGAP23Q9P227 1491 aa19.36■□□□□ 0.69
CTSC-202ENST00000393301 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
CTSC-202ENST00000393301 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
CTSC-202ENST00000393301 SYNMO15061 1565 aa19.32■□□□□ 0.68
CTSC-202ENST00000393301 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
CTSC-202ENST00000393301 SCAF11Q99590 1463 aaKnown RBP19.29■□□□□ 0.68
CTSC-202ENST00000393301 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
CTSC-202ENST00000393301 UBAP1LF5GYI3 381 aa19.28■□□□□ 0.68
CTSC-202ENST00000393301 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
CTSC-202ENST00000393301 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
CTSC-202ENST00000393301 KANK1Q14678 1352 aa19.28■□□□□ 0.68
CTSC-202ENST00000393301 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
CTSC-202ENST00000393301 NOS1P29475 1434 aa19.27■□□□□ 0.68
CTSC-202ENST00000393301 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
CTSC-202ENST00000393301 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
CTSC-202ENST00000393301 LRRC7Q96NW7 1537 aa19.23■□□□□ 0.67
CTSC-202ENST00000393301 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
CTSC-202ENST00000393301 ANKRD50Q9ULJ7 1429 aa19.21■□□□□ 0.67
CTSC-202ENST00000393301 TET3O43151 1660 aa19.2■□□□□ 0.66
CTSC-202ENST00000393301 UNC13BO14795 1591 aa19.2■□□□□ 0.66
CTSC-202ENST00000393301 TOM1O60784 492 aa19.2■□□□□ 0.66
CTSC-202ENST00000393301 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
CTSC-202ENST00000393301 LTKP29376 864 aa19.19■□□□□ 0.66
CTSC-202ENST00000393301 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
CTSC-202ENST00000393301 XIRP1Q702N8 1843 aaKnown RBP19.18■□□□□ 0.66
CTSC-202ENST00000393301 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
CTSC-202ENST00000393301 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
CTSC-202ENST00000393301 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
CTSC-202ENST00000393301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
CTSC-202ENST00000393301 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
CTSC-202ENST00000393301 IDI1Q13907 227 aa19.14■□□□□ 0.65
CTSC-202ENST00000393301 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
CTSC-202ENST00000393301 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
CTSC-202ENST00000393301 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
CTSC-202ENST00000393301 NWD1Q149M9 1564 aa19.12■□□□□ 0.65
CTSC-202ENST00000393301 ZFYVE9O95405 1425 aa19.1■□□□□ 0.65
CTSC-202ENST00000393301 HSPA1LP34931 641 aa19.1■□□□□ 0.65
CTSC-202ENST00000393301 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
CTSC-202ENST00000393301 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
CTSC-202ENST00000393301 SOCS7O14512 581 aa19.09■□□□□ 0.65
CTSC-202ENST00000393301 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
CTSC-202ENST00000393301 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
CTSC-202ENST00000393301 E9PCH4 1651 aa19.08■□□□□ 0.65
CTSC-202ENST00000393301 NKTRP30414 1462 aaKnown RBP19.08■□□□□ 0.64
CTSC-202ENST00000393301 PIP4K2BP78356 416 aa19.05■□□□□ 0.64
CTSC-202ENST00000393301 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms