RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PPRC1Q5VV67 1664 aaKnown RBP25.22■■□□□ 1.63
MBD4-202ENST00000393278 EIF2AK4Q9P2K8 1649 aaKnown RBP25.22■■□□□ 1.63
MBD4-202ENST00000393278 DEPDC5O75140 1603 aa25.2■■□□□ 1.63
MBD4-202ENST00000393278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.2■■□□□ 1.631e-9■■■□□ 16.7
MBD4-202ENST00000393278 RICTORQ6R327 1708 aa25.2■■□□□ 1.62
MBD4-202ENST00000393278 TEX14Q8IWB6 1497 aa25.19■■□□□ 1.62
MBD4-202ENST00000393278 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
MBD4-202ENST00000393278 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
MBD4-202ENST00000393278 A2MP01023 1474 aa25.17■■□□□ 1.62
MBD4-202ENST00000393278 TSPOAP1O95153 1857 aa25.16■■□□□ 1.62
MBD4-202ENST00000393278 ABCA6Q8N139 1617 aa25.14■■□□□ 1.62
MBD4-202ENST00000393278 FRMPD1Q5SYB0 1578 aa25.14■■□□□ 1.61
MBD4-202ENST00000393278 KIF3BO15066 747 aa25.12■■□□□ 1.61
MBD4-202ENST00000393278 PRDM15P57071 1507 aaPredicted RBP25.11■■□□□ 1.61
MBD4-202ENST00000393278 VWDEQ8N2E2 1590 aa25.11■■□□□ 1.61
MBD4-202ENST00000393278 MROH1Q8NDA8 1641 aa25.1■■□□□ 1.61
MBD4-202ENST00000393278 L3MBTL2Q969R5 705 aa25.1■■□□□ 1.61
MBD4-202ENST00000393278 ZMYM4Q5VZL5 1548 aa25.09■■□□□ 1.61
MBD4-202ENST00000393278 DIP2CQ9Y2E4 1556 aa25.09■■□□□ 1.61
MBD4-202ENST00000393278 KANK1Q14678 1352 aa25.08■■□□□ 1.61
MBD4-202ENST00000393278 RNF17Q9BXT8 1623 aaKnown RBP25.07■■□□□ 1.6
MBD4-202ENST00000393278 BCORL1Q5H9F3 1711 aa25.07■■□□□ 1.6
MBD4-202ENST00000393278 PLA2R1Q13018 1463 aa25.06■■□□□ 1.6
MBD4-202ENST00000393278 ATP10AO60312 1499 aa25.05■■□□□ 1.6
MBD4-202ENST00000393278 TET3O43151 1660 aa25.05■■□□□ 1.6
MBD4-202ENST00000393278 YEATS2Q9ULM3 1422 aa25.02■■□□□ 1.6
MBD4-202ENST00000393278 E9PCH4 1651 aa25.02■■□□□ 1.6
MBD4-202ENST00000393278 CCDC144AA2RUR9 1427 aa25.01■■□□□ 1.59
MBD4-202ENST00000393278 LMTK2Q8IWU2 1503 aa24.99■■□□□ 1.59
MBD4-202ENST00000393278 DIEXFQ68CQ4 756 aaKnown RBP24.98■■□□□ 1.59
MBD4-202ENST00000393278 PTPRTO14522 1441 aa24.95■■□□□ 1.58
MBD4-202ENST00000393278 EFCAB6Q5THR3 1501 aa24.95■■□□□ 1.58
MBD4-202ENST00000393278 COL17A1Q9UMD9 1497 aaPredicted RBP24.94■■□□□ 1.58
MBD4-202ENST00000393278 TRPM2O94759 1503 aa24.93■■□□□ 1.58
MBD4-202ENST00000393278 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
MBD4-202ENST00000393278 CEP152O94986 1710 aa24.92■■□□□ 1.58
MBD4-202ENST00000393278 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
MBD4-202ENST00000393278 GGT6Q6P531 493 aa24.91■■□□□ 1.58
MBD4-202ENST00000393278 REREQ9P2R6 1566 aa24.9■■□□□ 1.58
MBD4-202ENST00000393278 UHRF1BP1Q6BDS2 1440 aa24.88■■□□□ 1.57
MBD4-202ENST00000393278 ABCC3O15438 1527 aa24.88■■□□□ 1.57
MBD4-202ENST00000393278 ARHGEF40Q8TER5 1519 aa24.84■■□□□ 1.57
MBD4-202ENST00000393278 AGLP35573 1532 aa24.83■■□□□ 1.57
MBD4-202ENST00000393278 CLTCL1P53675 1640 aa24.83■■□□□ 1.57
MBD4-202ENST00000393278 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
MBD4-202ENST00000393278 ZC3H13Q5T200 1668 aaKnown RBP24.82■■□□□ 1.56
MBD4-202ENST00000393278 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
MBD4-202ENST00000393278 NPATQ14207 1427 aa24.81■■□□□ 1.56
MBD4-202ENST00000393278 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
MBD4-202ENST00000393278 CAMSAP1Q5T5Y3 1602 aa24.8■■□□□ 1.56
MBD4-202ENST00000393278 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
MBD4-202ENST00000393278 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
MBD4-202ENST00000393278 EIF4G2P78344 907 aaKnown RBP eCLIP24.77■■□□□ 1.56
MBD4-202ENST00000393278 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
MBD4-202ENST00000393278 KDM2AQ9Y2K7 1162 aa24.77■■□□□ 1.56
MBD4-202ENST00000393278 NEURL4Q96JN8 1562 aa24.77■■□□□ 1.56
MBD4-202ENST00000393278 ZNF326Q5BKZ1 582 aaKnown RBP24.76■■□□□ 1.55
MBD4-202ENST00000393278 ARHGAP31Q2M1Z3 1444 aa24.76■■□□□ 1.55
MBD4-202ENST00000393278 HSPA5P11021 654 aaKnown RBP24.75■■□□□ 1.55
MBD4-202ENST00000393278 PRAG1Q86YV5 1406 aa24.74■■□□□ 1.55
MBD4-202ENST00000393278 CNTLNQ9NXG0 1405 aa24.74■■□□□ 1.55
MBD4-202ENST00000393278 SIGLEC1Q9BZZ2 1709 aa24.73■■□□□ 1.55
MBD4-202ENST00000393278 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
MBD4-202ENST00000393278 UGGT1Q9NYU2 1555 aa24.73■■□□□ 1.55
MBD4-202ENST00000393278 PPP6R1Q9UPN7 881 aa24.71■■□□□ 1.55
MBD4-202ENST00000393278 NOS1P29475 1434 aa24.7■■□□□ 1.54
MBD4-202ENST00000393278 KIF1BO60333 1816 aa24.68■■□□□ 1.54
MBD4-202ENST00000393278 TRPM1Q7Z4N2 1603 aa24.67■■□□□ 1.54
MBD4-202ENST00000393278 STAC3Q96MF2 364 aa24.66■■□□□ 1.54
MBD4-202ENST00000393278 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
MBD4-202ENST00000393278 SYNMO15061 1565 aa24.64■■□□□ 1.53
MBD4-202ENST00000393278 ADGRB3O60242 1522 aa24.64■■□□□ 1.53
MBD4-202ENST00000393278 USP47Q96K76 1375 aa24.63■■□□□ 1.53
MBD4-202ENST00000393278 PIK3C2BO00750 1634 aa24.62■■□□□ 1.53
MBD4-202ENST00000393278 MROH2AA6NES4 1674 aa24.62■■□□□ 1.53
MBD4-202ENST00000393278 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
MBD4-202ENST00000393278 CARD11Q9BXL7 1154 aa24.62■■□□□ 1.53
MBD4-202ENST00000393278 ROCK2O75116 1388 aaKnown RBP24.61■■□□□ 1.53
MBD4-202ENST00000393278 GPRASP1Q5JY77 1395 aa24.61■■□□□ 1.53
MBD4-202ENST00000393278 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
MBD4-202ENST00000393278 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
MBD4-202ENST00000393278 DDX10Q13206 875 aaKnown RBP24.59■■□□□ 1.53
MBD4-202ENST00000393278 MIER1Q8N108 512 aa24.59■■□□□ 1.53
MBD4-202ENST00000393278 LAMC1P11047 1609 aa24.58■■□□□ 1.53
MBD4-202ENST00000393278 MYOM2P54296 1465 aa24.58■■□□□ 1.52
MBD4-202ENST00000393278 IFT172Q9UG01 1749 aa24.57■■□□□ 1.52
MBD4-202ENST00000393278 MLECQ14165 292 aa24.56■■□□□ 1.52
MBD4-202ENST00000393278 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
MBD4-202ENST00000393278 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
MBD4-202ENST00000393278 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
MBD4-202ENST00000393278 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
MBD4-202ENST00000393278 CHGAP10645 457 aaKnown RBP24.52■■□□□ 1.52
MBD4-202ENST00000393278 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
MBD4-202ENST00000393278 CCDC7Q96M83 1385 aa24.51■■□□□ 1.51
MBD4-202ENST00000393278 C11orf95C9JLR9 678 aaPredicted RBP24.5■■□□□ 1.51
MBD4-202ENST00000393278 ARID4BQ4LE39 1312 aaPredicted RBP24.5■■□□□ 1.51
MBD4-202ENST00000393278 NRXN1Q9ULB1 1477 aa24.5■■□□□ 1.51
MBD4-202ENST00000393278 IDI1Q13907 227 aa24.5■■□□□ 1.51
MBD4-202ENST00000393278 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
MBD4-202ENST00000393278 KIAA1210Q9ULL0 1709 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms