RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 RAPGEF3O95398 923 aa16.15■□□□□ 0.18
PDGFD-202ENST00000393158 TET3O43151 1660 aa16.14■□□□□ 0.17
PDGFD-202ENST00000393158 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
PDGFD-202ENST00000393158 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
PDGFD-202ENST00000393158 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
PDGFD-202ENST00000393158 DHX29Q7Z478 1369 aaKnown RBP16.11■□□□□ 0.17
PDGFD-202ENST00000393158 A2MP01023 1474 aa16.11■□□□□ 0.17
PDGFD-202ENST00000393158 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
PDGFD-202ENST00000393158 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
PDGFD-202ENST00000393158 SPHKAPQ2M3C7 1700 aa16.11■□□□□ 0.17
PDGFD-202ENST00000393158 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
PDGFD-202ENST00000393158 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
PDGFD-202ENST00000393158 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
PDGFD-202ENST00000393158 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.16
PDGFD-202ENST00000393158 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.16
PDGFD-202ENST00000393158 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
PDGFD-202ENST00000393158 EFCAB6Q5THR3 1501 aa16.07■□□□□ 0.16
PDGFD-202ENST00000393158 ATP10AO60312 1499 aa16.07■□□□□ 0.16
PDGFD-202ENST00000393158 AGLP35573 1532 aa16.06■□□□□ 0.16
PDGFD-202ENST00000393158 ABCC3O15438 1527 aa16.05■□□□□ 0.16
PDGFD-202ENST00000393158 FOXD1Q16676 465 aa16.05■□□□□ 0.16
PDGFD-202ENST00000393158 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
PDGFD-202ENST00000393158 PIK3C2BO00750 1634 aa16.03■□□□□ 0.16
PDGFD-202ENST00000393158 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
PDGFD-202ENST00000393158 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
PDGFD-202ENST00000393158 IFT172Q9UG01 1749 aa16.03■□□□□ 0.16
PDGFD-202ENST00000393158 MROH2AA6NES4 1674 aa16.02■□□□□ 0.16
PDGFD-202ENST00000393158 NUP155O75694 1391 aa16.01■□□□□ 0.15
PDGFD-202ENST00000393158 PTPRTO14522 1441 aa16.01■□□□□ 0.15
PDGFD-202ENST00000393158 TRPM2O94759 1503 aa16.01■□□□□ 0.15
PDGFD-202ENST00000393158 SYNMO15061 1565 aa16■□□□□ 0.15
PDGFD-202ENST00000393158 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
PDGFD-202ENST00000393158 CFAP65Q6ZU64 1925 aaKnown RBP15.99■□□□□ 0.15
PDGFD-202ENST00000393158 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
PDGFD-202ENST00000393158 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
PDGFD-202ENST00000393158 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
PDGFD-202ENST00000393158 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.15
PDGFD-202ENST00000393158 NPATQ14207 1427 aa15.94■□□□□ 0.14
PDGFD-202ENST00000393158 PKD2Q13563 968 aa15.93■□□□□ 0.14
PDGFD-202ENST00000393158 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
PDGFD-202ENST00000393158 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
PDGFD-202ENST00000393158 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
PDGFD-202ENST00000393158 SPATA31E1Q6ZUB1 1445 aa15.91■□□□□ 0.14
PDGFD-202ENST00000393158 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
PDGFD-202ENST00000393158 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
PDGFD-202ENST00000393158 KIF1BO60333 1816 aa15.9■□□□□ 0.14
PDGFD-202ENST00000393158 NOS1P29475 1434 aa15.89■□□□□ 0.13
PDGFD-202ENST00000393158 PPLO60437 1756 aa15.89■□□□□ 0.13
PDGFD-202ENST00000393158 KIF3BO15066 747 aa15.89■□□□□ 0.13
PDGFD-202ENST00000393158 TRPM1Q7Z4N2 1603 aa15.88■□□□□ 0.13
PDGFD-202ENST00000393158 ADGRB3O60242 1522 aa15.87■□□□□ 0.13
PDGFD-202ENST00000393158 C3P01024 1663 aa15.87■□□□□ 0.13
PDGFD-202ENST00000393158 FER1L4A9Z1Z3 1794 aa15.87■□□□□ 0.13
PDGFD-202ENST00000393158 SPATA31D1Q6ZQQ2 1576 aa15.86■□□□□ 0.13
PDGFD-202ENST00000393158 TMEM131LA2VDJ0 1609 aa15.85■□□□□ 0.13
PDGFD-202ENST00000393158 MADDQ8WXG6 1647 aa15.85■□□□□ 0.13
PDGFD-202ENST00000393158 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
PDGFD-202ENST00000393158 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
PDGFD-202ENST00000393158 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.12
PDGFD-202ENST00000393158 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
PDGFD-202ENST00000393158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDGFD-202ENST00000393158 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
PDGFD-202ENST00000393158 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
PDGFD-202ENST00000393158 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
PDGFD-202ENST00000393158 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
PDGFD-202ENST00000393158 NRXN1Q9ULB1 1477 aa15.79■□□□□ 0.12
PDGFD-202ENST00000393158 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
PDGFD-202ENST00000393158 SETD1AO15047 1707 aaKnown RBP15.79■□□□□ 0.12
PDGFD-202ENST00000393158 KDM5AP29375 1690 aaKnown RBP15.79■□□□□ 0.12
PDGFD-202ENST00000393158 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
PDGFD-202ENST00000393158 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
PDGFD-202ENST00000393158 NEXMIFQ5QGS0 1516 aa15.77■□□□□ 0.12
PDGFD-202ENST00000393158 LAMC1P11047 1609 aa15.77■□□□□ 0.12
PDGFD-202ENST00000393158 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
PDGFD-202ENST00000393158 KIAA1210Q9ULL0 1709 aa15.77■□□□□ 0.11
PDGFD-202ENST00000393158 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.11
PDGFD-202ENST00000393158 CCDC144AA2RUR9 1427 aa15.76■□□□□ 0.11
PDGFD-202ENST00000393158 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
PDGFD-202ENST00000393158 GGT6Q6P531 493 aa15.74■□□□□ 0.11
PDGFD-202ENST00000393158 PRAG1Q86YV5 1406 aa15.74■□□□□ 0.11
PDGFD-202ENST00000393158 KANK1Q14678 1352 aa15.74■□□□□ 0.11
PDGFD-202ENST00000393158 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
PDGFD-202ENST00000393158 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
PDGFD-202ENST00000393158 RIMS1Q86UR5 1692 aaKnown RBP15.72■□□□□ 0.11
PDGFD-202ENST00000393158 MYOM2P54296 1465 aa15.71■□□□□ 0.11
PDGFD-202ENST00000393158 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
PDGFD-202ENST00000393158 WASHC2CQ9Y4E1 1318 aa15.69■□□□□ 0.1
PDGFD-202ENST00000393158 MYO3AQ8NEV4 1616 aa15.69■□□□□ 0.1
PDGFD-202ENST00000393158 MYT1LQ9UL68 1186 aa15.68■□□□□ 0.1
PDGFD-202ENST00000393158 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
PDGFD-202ENST00000393158 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
PDGFD-202ENST00000393158 ZNF142P52746 1687 aaPredicted RBP15.67■□□□□ 0.1
PDGFD-202ENST00000393158 ZMYM3Q14202 1370 aa15.67■□□□□ 0.1
PDGFD-202ENST00000393158 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
PDGFD-202ENST00000393158 ASXL1Q8IXJ9 1541 aa15.66■□□□□ 0.1
PDGFD-202ENST00000393158 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
PDGFD-202ENST00000393158 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
PDGFD-202ENST00000393158 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
PDGFD-202ENST00000393158 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
PDGFD-202ENST00000393158 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms