RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
PDCD4-202ENST00000393104 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
PDCD4-202ENST00000393104 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
PDCD4-202ENST00000393104 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
PDCD4-202ENST00000393104 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
PDCD4-202ENST00000393104 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
PDCD4-202ENST00000393104 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
PDCD4-202ENST00000393104 ASXL2Q76L83 1435 aa15.57■□□□□ 0.08
PDCD4-202ENST00000393104 RSPH4AQ5TD94 716 aa15.56■□□□□ 0.08
PDCD4-202ENST00000393104 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
PDCD4-202ENST00000393104 NBR1Q14596 966 aa15.55■□□□□ 0.08
PDCD4-202ENST00000393104 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
PDCD4-202ENST00000393104 MYT1LQ9UL68 1186 aa15.54■□□□□ 0.08
PDCD4-202ENST00000393104 SYCP2Q9BX26 1530 aa15.54■□□□□ 0.08
PDCD4-202ENST00000393104 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
PDCD4-202ENST00000393104 UNC13BO14795 1591 aa15.54■□□□□ 0.08
PDCD4-202ENST00000393104 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
PDCD4-202ENST00000393104 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
PDCD4-202ENST00000393104 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
PDCD4-202ENST00000393104 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
PDCD4-202ENST00000393104 USP47Q96K76 1375 aa15.5■□□□□ 0.07
PDCD4-202ENST00000393104 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
PDCD4-202ENST00000393104 ARHGEF12Q9NZN5 1544 aa15.49■□□□□ 0.07
PDCD4-202ENST00000393104 EIF2AK4Q9P2K8 1649 aaKnown RBP15.49■□□□□ 0.07
PDCD4-202ENST00000393104 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
PDCD4-202ENST00000393104 MAGI2Q86UL8 1455 aa15.49■□□□□ 0.07
PDCD4-202ENST00000393104 ANO8Q9HCE9 1232 aaPredicted RBP15.48■□□□□ 0.07
PDCD4-202ENST00000393104 ANKRD30AQ9BXX3 1397 aa15.48■□□□□ 0.07
PDCD4-202ENST00000393104 RALGAPBQ86X10 1494 aa15.48■□□□□ 0.07
PDCD4-202ENST00000393104 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
PDCD4-202ENST00000393104 ZFYVE16Q7Z3T8 1539 aa15.47■□□□□ 0.07
PDCD4-202ENST00000393104 DEPDC5O75140 1603 aa15.47■□□□□ 0.07
PDCD4-202ENST00000393104 DUOX2Q9NRD8 1548 aa15.47■□□□□ 0.07
PDCD4-202ENST00000393104 IL27Q8NEV9 243 aa15.46■□□□□ 0.07
PDCD4-202ENST00000393104 NEO1Q92859 1461 aa15.46■□□□□ 0.07
PDCD4-202ENST00000393104 DIP2BQ9P265 1576 aa15.46■□□□□ 0.07
PDCD4-202ENST00000393104 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
PDCD4-202ENST00000393104 ERBINQ96RT1 1412 aa15.44■□□□□ 0.06
PDCD4-202ENST00000393104 FANCAO15360 1455 aa15.44■□□□□ 0.06
PDCD4-202ENST00000393104 SKAP1Q86WV1 359 aa15.43■□□□□ 0.06
PDCD4-202ENST00000393104 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
PDCD4-202ENST00000393104 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
PDCD4-202ENST00000393104 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
PDCD4-202ENST00000393104 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
PDCD4-202ENST00000393104 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
PDCD4-202ENST00000393104 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
PDCD4-202ENST00000393104 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
PDCD4-202ENST00000393104 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
PDCD4-202ENST00000393104 RRP1P56182 461 aaKnown RBP15.4■□□□□ 0.06
PDCD4-202ENST00000393104 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
PDCD4-202ENST00000393104 BACH2Q9BYV9 841 aa15.4■□□□□ 0.06
PDCD4-202ENST00000393104 TRPM1Q7Z4N2 1603 aa15.4■□□□□ 0.06
PDCD4-202ENST00000393104 ATP7AQ04656 1500 aa15.39■□□□□ 0.05
PDCD4-202ENST00000393104 ANKRD50Q9ULJ7 1429 aa15.39■□□□□ 0.05
PDCD4-202ENST00000393104 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
PDCD4-202ENST00000393104 KIF13AQ9H1H9 1805 aa15.38■□□□□ 0.05
PDCD4-202ENST00000393104 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
PDCD4-202ENST00000393104 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
PDCD4-202ENST00000393104 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
PDCD4-202ENST00000393104 ZMYM4Q5VZL5 1548 aa15.37■□□□□ 0.05
PDCD4-202ENST00000393104 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDCD4-202ENST00000393104 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
PDCD4-202ENST00000393104 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
PDCD4-202ENST00000393104 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
PDCD4-202ENST00000393104 HECW2Q9P2P5 1572 aa15.37■□□□□ 0.05
PDCD4-202ENST00000393104 ZNF518AQ6AHZ1 1483 aa15.36■□□□□ 0.05
PDCD4-202ENST00000393104 TRAPPC8Q9Y2L5 1435 aa15.36■□□□□ 0.05
PDCD4-202ENST00000393104 PDE4AP27815 886 aa15.36■□□□□ 0.05
PDCD4-202ENST00000393104 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
PDCD4-202ENST00000393104 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
PDCD4-202ENST00000393104 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
PDCD4-202ENST00000393104 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
PDCD4-202ENST00000393104 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
PDCD4-202ENST00000393104 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.05
PDCD4-202ENST00000393104 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.05
PDCD4-202ENST00000393104 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.04
PDCD4-202ENST00000393104 REREQ9P2R6 1566 aa15.33■□□□□ 0.04
PDCD4-202ENST00000393104 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
PDCD4-202ENST00000393104 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
PDCD4-202ENST00000393104 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
PDCD4-202ENST00000393104 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
PDCD4-202ENST00000393104 ANP32AP39687 249 aaKnown RBP15.32■□□□□ 0.04
PDCD4-202ENST00000393104 PKD2Q13563 968 aa15.31■□□□□ 0.04
PDCD4-202ENST00000393104 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
PDCD4-202ENST00000393104 MROH1Q8NDA8 1641 aa15.31■□□□□ 0.04
PDCD4-202ENST00000393104 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
PDCD4-202ENST00000393104 ROCK2O75116 1388 aaKnown RBP15.31■□□□□ 0.04
PDCD4-202ENST00000393104 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 ATP10AO60312 1499 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 TET3O43151 1660 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 NEURL4Q96JN8 1562 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 KDM2BQ8NHM5 1336 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDCD4-202ENST00000393104 LMTK2Q8IWU2 1503 aa15.3■□□□□ 0.04
PDCD4-202ENST00000393104 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
PDCD4-202ENST00000393104 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
PDCD4-202ENST00000393104 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
PDCD4-202ENST00000393104 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
PDCD4-202ENST00000393104 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
PDCD4-202ENST00000393104 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms