RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
USP44-202ENST00000393091 HRCP23327 699 aa20.19■□□□□ 0.82
USP44-202ENST00000393091 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
USP44-202ENST00000393091 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
USP44-202ENST00000393091 ANKRD50Q9ULJ7 1429 aa20.15■□□□□ 0.82
USP44-202ENST00000393091 FER1L4A9Z1Z3 1794 aa20.13■□□□□ 0.81
USP44-202ENST00000393091 TET3O43151 1660 aa20.13■□□□□ 0.81
USP44-202ENST00000393091 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
USP44-202ENST00000393091 CAMSAP1Q5T5Y3 1602 aa20.09■□□□□ 0.81
USP44-202ENST00000393091 CEP152O94986 1710 aa20.08■□□□□ 0.8
USP44-202ENST00000393091 ABCC3O15438 1527 aa20.08■□□□□ 0.8
USP44-202ENST00000393091 CNTLNQ9NXG0 1405 aa20.07■□□□□ 0.8
USP44-202ENST00000393091 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
USP44-202ENST00000393091 CLTCQ00610 1675 aaKnown RBP20.06■□□□□ 0.8
USP44-202ENST00000393091 EFCAB6Q5THR3 1501 aa20.04■□□□□ 0.8
USP44-202ENST00000393091 MADDQ8WXG6 1647 aa20.03■□□□□ 0.8
USP44-202ENST00000393091 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
USP44-202ENST00000393091 C3P01024 1663 aa20.02■□□□□ 0.8
USP44-202ENST00000393091 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
USP44-202ENST00000393091 E9PCH4 1651 aa20.01■□□□□ 0.79
USP44-202ENST00000393091 PZPP20742 1482 aa19.99■□□□□ 0.79
USP44-202ENST00000393091 KDM5AP29375 1690 aaKnown RBP19.99■□□□□ 0.79
USP44-202ENST00000393091 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
USP44-202ENST00000393091 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
USP44-202ENST00000393091 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
USP44-202ENST00000393091 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
USP44-202ENST00000393091 PREX1Q8TCU6 1659 aa19.97■□□□□ 0.79
USP44-202ENST00000393091 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
USP44-202ENST00000393091 PIK3C2BO00750 1634 aa19.95■□□□□ 0.78
USP44-202ENST00000393091 SPHKAPQ2M3C7 1700 aa19.95■□□□□ 0.78
USP44-202ENST00000393091 NPATQ14207 1427 aa19.93■□□□□ 0.78
USP44-202ENST00000393091 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
USP44-202ENST00000393091 KANK1Q14678 1352 aa19.93■□□□□ 0.78
USP44-202ENST00000393091 KIF3BO15066 747 aa19.9■□□□□ 0.78
USP44-202ENST00000393091 PTPRTO14522 1441 aa19.9■□□□□ 0.78
USP44-202ENST00000393091 ITGAEP38570 1179 aa19.88■□□□□ 0.77
USP44-202ENST00000393091 NOS1P29475 1434 aa19.88■□□□□ 0.77
USP44-202ENST00000393091 TRPM2O94759 1503 aa19.88■□□□□ 0.77
USP44-202ENST00000393091 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
USP44-202ENST00000393091 SYNMO15061 1565 aa19.86■□□□□ 0.77
USP44-202ENST00000393091 PTPRMP28827 1452 aa19.86■□□□□ 0.77
USP44-202ENST00000393091 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
USP44-202ENST00000393091 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.77
USP44-202ENST00000393091 NUP155O75694 1391 aa19.83■□□□□ 0.76
USP44-202ENST00000393091 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
USP44-202ENST00000393091 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
USP44-202ENST00000393091 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
USP44-202ENST00000393091 NLRP1Q9C000 1473 aa19.78■□□□□ 0.76
USP44-202ENST00000393091 WASHC2CQ9Y4E1 1318 aa19.77■□□□□ 0.76
USP44-202ENST00000393091 PLA2R1Q13018 1463 aa19.77■□□□□ 0.76
USP44-202ENST00000393091 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
USP44-202ENST00000393091 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
USP44-202ENST00000393091 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
USP44-202ENST00000393091 KIF1BO60333 1816 aa19.76■□□□□ 0.75
USP44-202ENST00000393091 GGT6Q6P531 493 aa19.75■□□□□ 0.75
USP44-202ENST00000393091 IFT172Q9UG01 1749 aa19.75■□□□□ 0.75
USP44-202ENST00000393091 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
USP44-202ENST00000393091 TMEM131LA2VDJ0 1609 aa19.74■□□□□ 0.75
USP44-202ENST00000393091 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
USP44-202ENST00000393091 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
USP44-202ENST00000393091 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
USP44-202ENST00000393091 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
USP44-202ENST00000393091 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
USP44-202ENST00000393091 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
USP44-202ENST00000393091 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
USP44-202ENST00000393091 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
USP44-202ENST00000393091 TNRQ92752 1358 aa19.66■□□□□ 0.74
USP44-202ENST00000393091 SLIT1O75093 1534 aa19.66■□□□□ 0.74
USP44-202ENST00000393091 PPLO60437 1756 aa19.65■□□□□ 0.74
USP44-202ENST00000393091 CFAP65Q6ZU64 1925 aaKnown RBP19.65■□□□□ 0.74
USP44-202ENST00000393091 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
USP44-202ENST00000393091 ESF1Q9H501 851 aaKnown RBP19.64■□□□□ 0.73
USP44-202ENST00000393091 ARHGAP23Q9P227 1491 aa19.64■□□□□ 0.73
USP44-202ENST00000393091 UGGT1Q9NYU2 1555 aa19.64■□□□□ 0.73
USP44-202ENST00000393091 PKD2Q13563 968 aa19.63■□□□□ 0.73
USP44-202ENST00000393091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP44-202ENST00000393091 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
USP44-202ENST00000393091 MLECQ14165 292 aa19.63■□□□□ 0.73
USP44-202ENST00000393091 POLR1AO95602 1720 aaPredicted RBP19.63■□□□□ 0.73
USP44-202ENST00000393091 SPATA31E1Q6ZUB1 1445 aa19.62■□□□□ 0.73
USP44-202ENST00000393091 TRIM52Q96A61 297 aa19.62■□□□□ 0.73
USP44-202ENST00000393091 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
USP44-202ENST00000393091 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
USP44-202ENST00000393091 NEXMIFQ5QGS0 1516 aa19.57■□□□□ 0.72
USP44-202ENST00000393091 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
USP44-202ENST00000393091 NRXN1Q9ULB1 1477 aa19.55■□□□□ 0.72
USP44-202ENST00000393091 CCDC144AA2RUR9 1427 aa19.55■□□□□ 0.72
USP44-202ENST00000393091 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
USP44-202ENST00000393091 MYOM2P54296 1465 aa19.54■□□□□ 0.72
USP44-202ENST00000393091 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
USP44-202ENST00000393091 MED14O60244 1454 aa19.54■□□□□ 0.72
USP44-202ENST00000393091 STRCQ7RTU9 1775 aa19.53■□□□□ 0.72
USP44-202ENST00000393091 SETD1AO15047 1707 aaKnown RBP19.52■□□□□ 0.72
USP44-202ENST00000393091 LAMC1P11047 1609 aa19.51■□□□□ 0.71
USP44-202ENST00000393091 RPGRIP1LQ68CZ1 1315 aa19.5■□□□□ 0.71
USP44-202ENST00000393091 SETBP1Q9Y6X0 1596 aa19.5■□□□□ 0.71
USP44-202ENST00000393091 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
USP44-202ENST00000393091 STAC3Q96MF2 364 aa19.5■□□□□ 0.71
USP44-202ENST00000393091 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
USP44-202ENST00000393091 NRXN3Q9Y4C0 1643 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms