RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ST18O60284 1047 aa16.36■□□□□ 0.21
LCA5-202ENST00000392959 GSE1Q14687 1217 aa16.36■□□□□ 0.21
LCA5-202ENST00000392959 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
LCA5-202ENST00000392959 DDX11L8A8MPP1 907 aa16.35■□□□□ 0.21
LCA5-202ENST00000392959 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
LCA5-202ENST00000392959 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
LCA5-202ENST00000392959 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
LCA5-202ENST00000392959 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
LCA5-202ENST00000392959 CRBNQ96SW2 442 aa16.33■□□□□ 0.21
LCA5-202ENST00000392959 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.21
LCA5-202ENST00000392959 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
LCA5-202ENST00000392959 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
LCA5-202ENST00000392959 GPATCH3Q96I76 525 aa16.33■□□□□ 0.2
LCA5-202ENST00000392959 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
LCA5-202ENST00000392959 E9PSI1 815 aa16.32■□□□□ 0.2
LCA5-202ENST00000392959 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
LCA5-202ENST00000392959 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
LCA5-202ENST00000392959 TPM4P67936 248 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 USP47Q96K76 1375 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 PHF14O94880 888 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 COG6Q9Y2V7 657 aa16.3■□□□□ 0.2
LCA5-202ENST00000392959 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
LCA5-202ENST00000392959 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
LCA5-202ENST00000392959 WIZO95785 1651 aa16.28■□□□□ 0.2
LCA5-202ENST00000392959 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
LCA5-202ENST00000392959 GORABQ5T7V8 394 aa16.28■□□□□ 0.2
LCA5-202ENST00000392959 CCDC34Q96HJ3 373 aa16.28■□□□□ 0.2
LCA5-202ENST00000392959 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
LCA5-202ENST00000392959 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
LCA5-202ENST00000392959 APAF1O14727 1248 aa16.27■□□□□ 0.2
LCA5-202ENST00000392959 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
LCA5-202ENST00000392959 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.2
LCA5-202ENST00000392959 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.19
LCA5-202ENST00000392959 ISY1Q9ULR0 285 aaKnown RBP16.27■□□□□ 0.19
LCA5-202ENST00000392959 CSB-PGBD3P0DP91 1061 aa16.27■□□□□ 0.19
LCA5-202ENST00000392959 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 SKOR2Q2VWA4 1001 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 FOXD4L5Q5VV16 416 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 FOXD4L4Q8WXT5 416 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
LCA5-202ENST00000392959 HSP90AA2PQ14568 343 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
LCA5-202ENST00000392959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.25■□□□□ 0.19
LCA5-202ENST00000392959 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
LCA5-202ENST00000392959 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
LCA5-202ENST00000392959 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
LCA5-202ENST00000392959 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
LCA5-202ENST00000392959 AMPHP49418 695 aa16.23■□□□□ 0.19
LCA5-202ENST00000392959 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
LCA5-202ENST00000392959 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
LCA5-202ENST00000392959 JPH4Q96JJ6 628 aa16.21■□□□□ 0.19
LCA5-202ENST00000392959 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.18
LCA5-202ENST00000392959 ATP6V1DQ9Y5K8 247 aa16.2■□□□□ 0.18
LCA5-202ENST00000392959 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
LCA5-202ENST00000392959 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
LCA5-202ENST00000392959 CLSTN1O94985 981 aa16.19■□□□□ 0.18
LCA5-202ENST00000392959 SF3A1Q15459 793 aaKnown RBP16.19■□□□□ 0.18
LCA5-202ENST00000392959 CHMP5Q9NZZ3 219 aa16.19■□□□□ 0.18
LCA5-202ENST00000392959 TNNT3P45378 269 aaPredicted RBP16.18■□□□□ 0.18
LCA5-202ENST00000392959 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
LCA5-202ENST00000392959 CCDC7Q96M83 1385 aa16.17■□□□□ 0.18
LCA5-202ENST00000392959 KIF7Q2M1P5 1343 aa16.16■□□□□ 0.18
LCA5-202ENST00000392959 REC8O95072 547 aa16.16■□□□□ 0.18
LCA5-202ENST00000392959 FOXD4L6Q3SYB3 417 aaPredicted RBP16.16■□□□□ 0.18
LCA5-202ENST00000392959 FOXD4L3Q6VB84 417 aaPredicted RBP16.16■□□□□ 0.18
LCA5-202ENST00000392959 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
LCA5-202ENST00000392959 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
LCA5-202ENST00000392959 EVC2Q86UK5 1308 aa16.16■□□□□ 0.18
LCA5-202ENST00000392959 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
LCA5-202ENST00000392959 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.18
LCA5-202ENST00000392959 GOLGA6L1Q8N7Z2 621 aa16.14■□□□□ 0.18
LCA5-202ENST00000392959 NOC3LQ8WTT2 800 aaKnown RBP16.14■□□□□ 0.17
LCA5-202ENST00000392959 RASSF8Q8NHQ8 419 aa16.14■□□□□ 0.17
LCA5-202ENST00000392959 H3BQV1 296 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 IFFO2Q5TF58 517 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 COG3Q96JB2 828 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 BECN2A8MW95 431 aa16.13■□□□□ 0.17
LCA5-202ENST00000392959 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
LCA5-202ENST00000392959 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
LCA5-202ENST00000392959 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
LCA5-202ENST00000392959 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
LCA5-202ENST00000392959 TPM3P06753 285 aa16.12■□□□□ 0.17
LCA5-202ENST00000392959 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
LCA5-202ENST00000392959 CREBRFQ8IUR6 639 aa16.11■□□□□ 0.17
LCA5-202ENST00000392959 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
LCA5-202ENST00000392959 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
LCA5-202ENST00000392959 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
LCA5-202ENST00000392959 NFKBIBQ15653 356 aa16.1■□□□□ 0.17
LCA5-202ENST00000392959 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
LCA5-202ENST00000392959 RIPK4P57078 832 aa16.1■□□□□ 0.17
LCA5-202ENST00000392959 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
LCA5-202ENST00000392959 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
LCA5-202ENST00000392959 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
LCA5-202ENST00000392959 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
LCA5-202ENST00000392959 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
LCA5-202ENST00000392959 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms