RNA–Protein interactions for RNA: ENST00000392900.3

TCAF1-202, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 2,513 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-202ENST00000392900 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
TCAF1-202ENST00000392900 NUP155O75694 1391 aa17.65■□□□□ 0.42
TCAF1-202ENST00000392900 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
TCAF1-202ENST00000392900 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
TCAF1-202ENST00000392900 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
TCAF1-202ENST00000392900 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
TCAF1-202ENST00000392900 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
TCAF1-202ENST00000392900 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
TCAF1-202ENST00000392900 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
TCAF1-202ENST00000392900 KIF15Q9NS87 1388 aa17.61■□□□□ 0.41
TCAF1-202ENST00000392900 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
TCAF1-202ENST00000392900 RAPGEF3O95398 923 aa17.6■□□□□ 0.41
TCAF1-202ENST00000392900 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
TCAF1-202ENST00000392900 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
TCAF1-202ENST00000392900 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
TCAF1-202ENST00000392900 NEFLP07196 543 aa17.58■□□□□ 0.41
TCAF1-202ENST00000392900 NEO1Q92859 1461 aa17.57■□□□□ 0.4
TCAF1-202ENST00000392900 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
TCAF1-202ENST00000392900 USP47Q96K76 1375 aa17.56■□□□□ 0.4
TCAF1-202ENST00000392900 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
TCAF1-202ENST00000392900 CFAP74Q9C0B2 1584 aa17.56■□□□□ 0.4
TCAF1-202ENST00000392900 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
TCAF1-202ENST00000392900 KDM2AQ9Y2K7 1162 aa17.55■□□□□ 0.4
TCAF1-202ENST00000392900 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
TCAF1-202ENST00000392900 POGZQ7Z3K3 1410 aa17.54■□□□□ 0.4
TCAF1-202ENST00000392900 RSPH4AQ5TD94 716 aa17.54■□□□□ 0.4
TCAF1-202ENST00000392900 MAST1Q9Y2H9 1570 aa17.54■□□□□ 0.4
TCAF1-202ENST00000392900 BCORL1Q5H9F3 1711 aa17.54■□□□□ 0.4
TCAF1-202ENST00000392900 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
TCAF1-202ENST00000392900 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
TCAF1-202ENST00000392900 TSHZ2Q9NRE2 1034 aa17.53■□□□□ 0.4
TCAF1-202ENST00000392900 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
TCAF1-202ENST00000392900 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
TCAF1-202ENST00000392900 RICTORQ6R327 1708 aa17.52■□□□□ 0.4
TCAF1-202ENST00000392900 INO80Q9ULG1 1556 aaPredicted RBP17.52■□□□□ 0.39
TCAF1-202ENST00000392900 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.39
TCAF1-202ENST00000392900 KDM5DQ9BY66 1539 aa17.51■□□□□ 0.39
TCAF1-202ENST00000392900 ZNF518AQ6AHZ1 1483 aa17.51■□□□□ 0.39
TCAF1-202ENST00000392900 KDM5CP41229 1560 aa17.5■□□□□ 0.39
TCAF1-202ENST00000392900 DCAF11Q8TEB1 546 aa17.5■□□□□ 0.39
TCAF1-202ENST00000392900 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
TCAF1-202ENST00000392900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
TCAF1-202ENST00000392900 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
TCAF1-202ENST00000392900 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
TCAF1-202ENST00000392900 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
TCAF1-202ENST00000392900 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
TCAF1-202ENST00000392900 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
TCAF1-202ENST00000392900 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
TCAF1-202ENST00000392900 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
TCAF1-202ENST00000392900 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
TCAF1-202ENST00000392900 YEATS2Q9ULM3 1422 aa17.45■□□□□ 0.38
TCAF1-202ENST00000392900 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
TCAF1-202ENST00000392900 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
TCAF1-202ENST00000392900 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
TCAF1-202ENST00000392900 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
TCAF1-202ENST00000392900 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
TCAF1-202ENST00000392900 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
TCAF1-202ENST00000392900 DUOX2Q9NRD8 1548 aa17.41■□□□□ 0.38
TCAF1-202ENST00000392900 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
TCAF1-202ENST00000392900 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
TCAF1-202ENST00000392900 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
TCAF1-202ENST00000392900 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.37
TCAF1-202ENST00000392900 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
TCAF1-202ENST00000392900 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
TCAF1-202ENST00000392900 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
TCAF1-202ENST00000392900 UNC13BO14795 1591 aa17.36■□□□□ 0.37
TCAF1-202ENST00000392900 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
TCAF1-202ENST00000392900 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
TCAF1-202ENST00000392900 A2MP01023 1474 aa17.35■□□□□ 0.37
TCAF1-202ENST00000392900 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
TCAF1-202ENST00000392900 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
TCAF1-202ENST00000392900 KIF3BO15066 747 aa17.34■□□□□ 0.37
TCAF1-202ENST00000392900 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
TCAF1-202ENST00000392900 MROH1Q8NDA8 1641 aa17.32■□□□□ 0.36
TCAF1-202ENST00000392900 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
TCAF1-202ENST00000392900 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
TCAF1-202ENST00000392900 MAGI2Q86UL8 1455 aa17.29■□□□□ 0.36
TCAF1-202ENST00000392900 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
TCAF1-202ENST00000392900 ATP10AO60312 1499 aa17.27■□□□□ 0.36
TCAF1-202ENST00000392900 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
TCAF1-202ENST00000392900 EIF2AK4Q9P2K8 1649 aaKnown RBP17.27■□□□□ 0.35
TCAF1-202ENST00000392900 GGT6Q6P531 493 aa17.26■□□□□ 0.35
TCAF1-202ENST00000392900 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
TCAF1-202ENST00000392900 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
TCAF1-202ENST00000392900 E9PCH4 1651 aa17.24■□□□□ 0.35
TCAF1-202ENST00000392900 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
TCAF1-202ENST00000392900 RBM19Q9Y4C8 960 aaKnown RBP17.23■□□□□ 0.35
TCAF1-202ENST00000392900 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
TCAF1-202ENST00000392900 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
TCAF1-202ENST00000392900 CEP152O94986 1710 aa17.21■□□□□ 0.35
TCAF1-202ENST00000392900 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
TCAF1-202ENST00000392900 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
TCAF1-202ENST00000392900 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
TCAF1-202ENST00000392900 MLECQ14165 292 aa17.19■□□□□ 0.34
TCAF1-202ENST00000392900 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
TCAF1-202ENST00000392900 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
TCAF1-202ENST00000392900 TESK2Q96S53 571 aa17.19■□□□□ 0.34
TCAF1-202ENST00000392900 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
TCAF1-202ENST00000392900 RALBP1Q15311 655 aa17.17■□□□□ 0.34
TCAF1-202ENST00000392900 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms