RNA–Protein interactions for RNA: ENST00000391976.6

HDLBP-204, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HDLBP, Length 4,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-204ENST00000391976 ATP10BO94823 1461 aa17.51■□□□□ 0.39
HDLBP-204ENST00000391976 NBPF1Q3BBV0 1214 aa17.5■□□□□ 0.39
HDLBP-204ENST00000391976 PANK3Q9H999 370 aa17.5■□□□□ 0.39
HDLBP-204ENST00000391976 CCDC184Q52MB2 194 aa17.5■□□□□ 0.39
HDLBP-204ENST00000391976 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
HDLBP-204ENST00000391976 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
HDLBP-204ENST00000391976 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
HDLBP-204ENST00000391976 A0A0G2JS52 829 aa17.49■□□□□ 0.39
HDLBP-204ENST00000391976 KIF14Q15058 1648 aa17.48■□□□□ 0.39
HDLBP-204ENST00000391976 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
HDLBP-204ENST00000391976 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
HDLBP-204ENST00000391976 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
HDLBP-204ENST00000391976 STK26Q9P289 416 aa17.47■□□□□ 0.39
HDLBP-204ENST00000391976 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
HDLBP-204ENST00000391976 POGKQ9P215 609 aa17.46■□□□□ 0.39
HDLBP-204ENST00000391976 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
HDLBP-204ENST00000391976 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
HDLBP-204ENST00000391976 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
HDLBP-204ENST00000391976 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
HDLBP-204ENST00000391976 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
HDLBP-204ENST00000391976 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
HDLBP-204ENST00000391976 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
HDLBP-204ENST00000391976 NUP160Q12769 1436 aa17.42■□□□□ 0.38
HDLBP-204ENST00000391976 HSP90AA1P07900 732 aaKnown RBP17.41■□□□□ 0.38
HDLBP-204ENST00000391976 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
HDLBP-204ENST00000391976 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
HDLBP-204ENST00000391976 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
HDLBP-204ENST00000391976 SRPK2P78362 688 aaKnown RBP17.4■□□□□ 0.38
HDLBP-204ENST00000391976 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
HDLBP-204ENST00000391976 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
HDLBP-204ENST00000391976 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
HDLBP-204ENST00000391976 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
HDLBP-204ENST00000391976 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
HDLBP-204ENST00000391976 SOX12O15370 315 aa17.35■□□□□ 0.37
HDLBP-204ENST00000391976 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
HDLBP-204ENST00000391976 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
HDLBP-204ENST00000391976 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.36
HDLBP-204ENST00000391976 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
HDLBP-204ENST00000391976 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
HDLBP-204ENST00000391976 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
HDLBP-204ENST00000391976 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
HDLBP-204ENST00000391976 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
HDLBP-204ENST00000391976 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
HDLBP-204ENST00000391976 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
HDLBP-204ENST00000391976 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
HDLBP-204ENST00000391976 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
HDLBP-204ENST00000391976 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
HDLBP-204ENST00000391976 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
HDLBP-204ENST00000391976 PZPP20742 1482 aa17.26■□□□□ 0.35
HDLBP-204ENST00000391976 KDM6BO15054 1643 aa17.25■□□□□ 0.35
HDLBP-204ENST00000391976 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
HDLBP-204ENST00000391976 STAC3Q96MF2 364 aa17.25■□□□□ 0.35
HDLBP-204ENST00000391976 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-204ENST00000391976 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
HDLBP-204ENST00000391976 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
HDLBP-204ENST00000391976 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-204ENST00000391976 RGS3P49796 1198 aa17.23■□□□□ 0.35
HDLBP-204ENST00000391976 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-204ENST00000391976 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-204ENST00000391976 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.353e-6■□□□□ 11.1
HDLBP-204ENST00000391976 PLIN1O60240 522 aa17.22■□□□□ 0.35
HDLBP-204ENST00000391976 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
HDLBP-204ENST00000391976 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.35
HDLBP-204ENST00000391976 PLCH2O75038 1416 aa17.21■□□□□ 0.35
HDLBP-204ENST00000391976 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
HDLBP-204ENST00000391976 ANP32EQ9BTT0 268 aa17.19■□□□□ 0.34
HDLBP-204ENST00000391976 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
HDLBP-204ENST00000391976 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
HDLBP-204ENST00000391976 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
HDLBP-204ENST00000391976 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-204ENST00000391976 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
HDLBP-204ENST00000391976 EXOC6Q8TAG9 804 aa17.18■□□□□ 0.34
HDLBP-204ENST00000391976 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
HDLBP-204ENST00000391976 RRP7AQ9Y3A4 280 aaKnown RBP17.18■□□□□ 0.34
HDLBP-204ENST00000391976 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-204ENST00000391976 APAF1O14727 1248 aa17.17■□□□□ 0.34
HDLBP-204ENST00000391976 FANCAO15360 1455 aa17.17■□□□□ 0.34
HDLBP-204ENST00000391976 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
HDLBP-204ENST00000391976 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
HDLBP-204ENST00000391976 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
HDLBP-204ENST00000391976 SHANK2Q9UPX8 1470 aa17.16■□□□□ 0.34
HDLBP-204ENST00000391976 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
HDLBP-204ENST00000391976 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
HDLBP-204ENST00000391976 EVC2Q86UK5 1308 aa17.15■□□□□ 0.34
HDLBP-204ENST00000391976 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
HDLBP-204ENST00000391976 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
HDLBP-204ENST00000391976 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
HDLBP-204ENST00000391976 PPP2R1AP30153 589 aa17.14■□□□□ 0.33
HDLBP-204ENST00000391976 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
HDLBP-204ENST00000391976 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
HDLBP-204ENST00000391976 ABCC2Q92887 1545 aa17.13■□□□□ 0.33
HDLBP-204ENST00000391976 ABCA8O94911 1581 aa17.12■□□□□ 0.33
HDLBP-204ENST00000391976 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
HDLBP-204ENST00000391976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■□□□ 12.9
HDLBP-204ENST00000391976 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
HDLBP-204ENST00000391976 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
HDLBP-204ENST00000391976 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
HDLBP-204ENST00000391976 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
HDLBP-204ENST00000391976 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-204ENST00000391976 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms