RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
ERCC2-204ENST00000391945 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
ERCC2-204ENST00000391945 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
ERCC2-204ENST00000391945 PANK3Q9H999 370 aa17.04■□□□□ 0.32
ERCC2-204ENST00000391945 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
ERCC2-204ENST00000391945 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.31
ERCC2-204ENST00000391945 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
ERCC2-204ENST00000391945 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
ERCC2-204ENST00000391945 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
ERCC2-204ENST00000391945 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
ERCC2-204ENST00000391945 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
ERCC2-204ENST00000391945 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
ERCC2-204ENST00000391945 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
ERCC2-204ENST00000391945 RALBP1Q15311 655 aa16.98■□□□□ 0.31
ERCC2-204ENST00000391945 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
ERCC2-204ENST00000391945 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
ERCC2-204ENST00000391945 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
ERCC2-204ENST00000391945 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
ERCC2-204ENST00000391945 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
ERCC2-204ENST00000391945 FANCAO15360 1455 aa16.95■□□□□ 0.3
ERCC2-204ENST00000391945 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
ERCC2-204ENST00000391945 SOX12O15370 315 aa16.95■□□□□ 0.3
ERCC2-204ENST00000391945 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
ERCC2-204ENST00000391945 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
ERCC2-204ENST00000391945 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
ERCC2-204ENST00000391945 PLCH2O75038 1416 aa16.94■□□□□ 0.3
ERCC2-204ENST00000391945 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
ERCC2-204ENST00000391945 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
ERCC2-204ENST00000391945 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
ERCC2-204ENST00000391945 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
ERCC2-204ENST00000391945 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
ERCC2-204ENST00000391945 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
ERCC2-204ENST00000391945 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
ERCC2-204ENST00000391945 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
ERCC2-204ENST00000391945 MINK1Q8N4C8 1332 aaPredicted RBP16.9■□□□□ 0.3
ERCC2-204ENST00000391945 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
ERCC2-204ENST00000391945 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
ERCC2-204ENST00000391945 ITSN2Q9NZM3 1697 aa16.87■□□□□ 0.29
ERCC2-204ENST00000391945 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
ERCC2-204ENST00000391945 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
ERCC2-204ENST00000391945 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
ERCC2-204ENST00000391945 LMOD2Q6P5Q4 547 aa16.86■□□□□ 0.29
ERCC2-204ENST00000391945 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
ERCC2-204ENST00000391945 CCDC146Q8IYE0 955 aa16.85■□□□□ 0.29
ERCC2-204ENST00000391945 CENPJQ9HC77 1338 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-204ENST00000391945 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-204ENST00000391945 STAC3Q96MF2 364 aa16.83■□□□□ 0.29
ERCC2-204ENST00000391945 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.29
ERCC2-204ENST00000391945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
ERCC2-204ENST00000391945 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
ERCC2-204ENST00000391945 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
ERCC2-204ENST00000391945 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
ERCC2-204ENST00000391945 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
ERCC2-204ENST00000391945 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
ERCC2-204ENST00000391945 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
ERCC2-204ENST00000391945 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
ERCC2-204ENST00000391945 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
ERCC2-204ENST00000391945 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
ERCC2-204ENST00000391945 ABCA8O94911 1581 aa16.8■□□□□ 0.28
ERCC2-204ENST00000391945 CHD1O14646 1710 aa16.8■□□□□ 0.28
ERCC2-204ENST00000391945 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
ERCC2-204ENST00000391945 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
ERCC2-204ENST00000391945 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
ERCC2-204ENST00000391945 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
ERCC2-204ENST00000391945 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
ERCC2-204ENST00000391945 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
ERCC2-204ENST00000391945 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
ERCC2-204ENST00000391945 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
ERCC2-204ENST00000391945 PZPP20742 1482 aa16.77■□□□□ 0.28
ERCC2-204ENST00000391945 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.27
ERCC2-204ENST00000391945 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.27
ERCC2-204ENST00000391945 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
ERCC2-204ENST00000391945 ABCC10Q5T3U5 1492 aa16.75■□□□□ 0.27
ERCC2-204ENST00000391945 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
ERCC2-204ENST00000391945 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
ERCC2-204ENST00000391945 IDI1Q13907 227 aa16.75■□□□□ 0.27
ERCC2-204ENST00000391945 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
ERCC2-204ENST00000391945 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
ERCC2-204ENST00000391945 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
ERCC2-204ENST00000391945 KDM6BO15054 1643 aa16.73■□□□□ 0.27
ERCC2-204ENST00000391945 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
ERCC2-204ENST00000391945 FAM135AQ9P2D6 1515 aa16.73■□□□□ 0.27
ERCC2-204ENST00000391945 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
ERCC2-204ENST00000391945 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
ERCC2-204ENST00000391945 SHANK2Q9UPX8 1470 aa16.72■□□□□ 0.27
ERCC2-204ENST00000391945 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
ERCC2-204ENST00000391945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.71■□□□□ 0.278e-6■□□□□ 10.5
ERCC2-204ENST00000391945 DUOX2Q9NRD8 1548 aa16.71■□□□□ 0.27
ERCC2-204ENST00000391945 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.26
ERCC2-204ENST00000391945 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
ERCC2-204ENST00000391945 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
ERCC2-204ENST00000391945 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
ERCC2-204ENST00000391945 APAF1O14727 1248 aa16.69■□□□□ 0.26
ERCC2-204ENST00000391945 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
ERCC2-204ENST00000391945 NBR1Q14596 966 aa16.68■□□□□ 0.26
ERCC2-204ENST00000391945 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
ERCC2-204ENST00000391945 A2MP01023 1474 aa16.67■□□□□ 0.26
ERCC2-204ENST00000391945 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
ERCC2-204ENST00000391945 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
ERCC2-204ENST00000391945 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms