RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
ERCC2-201ENST00000391941 ADGBQ8N7X0 1667 aa24■■□□□ 1.43
ERCC2-201ENST00000391941 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
ERCC2-201ENST00000391941 NEFMP07197 916 aa24■■□□□ 1.43
ERCC2-201ENST00000391941 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
ERCC2-201ENST00000391941 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
ERCC2-201ENST00000391941 C20orf194Q5TEA3 1177 aa23.98■■□□□ 1.43
ERCC2-201ENST00000391941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.431e-6■■□□□ 13.1
ERCC2-201ENST00000391941 BRD4O60885 1362 aaPredicted RBP23.96■■□□□ 1.43
ERCC2-201ENST00000391941 CRBNQ96SW2 442 aa23.96■■□□□ 1.43
ERCC2-201ENST00000391941 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.43
ERCC2-201ENST00000391941 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
ERCC2-201ENST00000391941 RALBP1Q15311 655 aa23.94■■□□□ 1.42
ERCC2-201ENST00000391941 CROCC2H7BZ55 1655 aa23.93■■□□□ 1.42
ERCC2-201ENST00000391941 BACH2Q9BYV9 841 aa23.93■■□□□ 1.42
ERCC2-201ENST00000391941 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
ERCC2-201ENST00000391941 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.42
ERCC2-201ENST00000391941 NLRP13Q86W25 1043 aa23.89■■□□□ 1.41
ERCC2-201ENST00000391941 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.41
ERCC2-201ENST00000391941 TCERG1O14776 1098 aaKnown RBP23.88■■□□□ 1.41
ERCC2-201ENST00000391941 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
ERCC2-201ENST00000391941 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
ERCC2-201ENST00000391941 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
ERCC2-201ENST00000391941 PANK3Q9H999 370 aa23.86■■□□□ 1.41
ERCC2-201ENST00000391941 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
ERCC2-201ENST00000391941 ADCY10Q96PN6 1610 aa23.85■■□□□ 1.41
ERCC2-201ENST00000391941 PER1O15534 1290 aaPredicted RBP23.85■■□□□ 1.41
ERCC2-201ENST00000391941 PLEKHD1A6NEE1 506 aa23.84■■□□□ 1.41
ERCC2-201ENST00000391941 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
ERCC2-201ENST00000391941 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.81■■□□□ 1.4
ERCC2-201ENST00000391941 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
ERCC2-201ENST00000391941 ADAMTS8Q9UP79 889 aa23.8■■□□□ 1.4
ERCC2-201ENST00000391941 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
ERCC2-201ENST00000391941 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
ERCC2-201ENST00000391941 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
ERCC2-201ENST00000391941 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
ERCC2-201ENST00000391941 SHANK2Q9UPX8 1470 aa23.79■■□□□ 1.4
ERCC2-201ENST00000391941 E9PCH4 1651 aa23.78■■□□□ 1.4
ERCC2-201ENST00000391941 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
ERCC2-201ENST00000391941 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.4
ERCC2-201ENST00000391941 KDM5DQ9BY66 1539 aa23.77■■□□□ 1.4
ERCC2-201ENST00000391941 BRPF3Q9ULD4 1205 aa23.76■■□□□ 1.39
ERCC2-201ENST00000391941 PTPRGP23470 1445 aa23.76■■□□□ 1.39
ERCC2-201ENST00000391941 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
ERCC2-201ENST00000391941 RGS3P49796 1198 aa23.75■■□□□ 1.39
ERCC2-201ENST00000391941 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
ERCC2-201ENST00000391941 TESK2Q96S53 571 aa23.73■■□□□ 1.39
ERCC2-201ENST00000391941 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
ERCC2-201ENST00000391941 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
ERCC2-201ENST00000391941 ATP10BO94823 1461 aa23.72■■□□□ 1.39
ERCC2-201ENST00000391941 MS4A1P11836 297 aa23.69■■□□□ 1.38
ERCC2-201ENST00000391941 CCDC144AA2RUR9 1427 aa23.69■■□□□ 1.38
ERCC2-201ENST00000391941 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
ERCC2-201ENST00000391941 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
ERCC2-201ENST00000391941 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
ERCC2-201ENST00000391941 NFKBIBQ15653 356 aa23.66■■□□□ 1.38
ERCC2-201ENST00000391941 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
ERCC2-201ENST00000391941 ABCA8O94911 1581 aa23.65■■□□□ 1.38
ERCC2-201ENST00000391941 SPINK5Q9NQ38 1064 aaPredicted RBP23.64■■□□□ 1.37
ERCC2-201ENST00000391941 COL17A1Q9UMD9 1497 aaPredicted RBP23.63■■□□□ 1.37
ERCC2-201ENST00000391941 BLMP54132 1417 aaPredicted RBP23.62■■□□□ 1.37
ERCC2-201ENST00000391941 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
ERCC2-201ENST00000391941 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
ERCC2-201ENST00000391941 A2MP01023 1474 aa23.61■■□□□ 1.37
ERCC2-201ENST00000391941 NUP160Q12769 1436 aa23.61■■□□□ 1.37
ERCC2-201ENST00000391941 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
ERCC2-201ENST00000391941 FRAT1Q92837 279 aaPredicted RBP23.6■■□□□ 1.37
ERCC2-201ENST00000391941 CCDC141Q6ZP82 1450 aa23.59■■□□□ 1.37
ERCC2-201ENST00000391941 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
ERCC2-201ENST00000391941 ARHGEF5Q12774 1597 aa23.59■■□□□ 1.37
ERCC2-201ENST00000391941 WDR43Q15061 677 aaKnown RBP eCLIP23.59■■□□□ 1.374e-9■■■■■ 77.9
ERCC2-201ENST00000391941 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
ERCC2-201ENST00000391941 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
ERCC2-201ENST00000391941 BCAR3O75815 825 aa23.58■■□□□ 1.37
ERCC2-201ENST00000391941 TMF1P82094 1093 aa23.58■■□□□ 1.37
ERCC2-201ENST00000391941 KDM2BQ8NHM5 1336 aa23.58■■□□□ 1.37
ERCC2-201ENST00000391941 PPP2R1AP30153 589 aa23.58■■□□□ 1.37
ERCC2-201ENST00000391941 DAXXQ9UER7 740 aaPredicted RBP23.58■■□□□ 1.37
ERCC2-201ENST00000391941 C8orf34Q49A92 452 aa23.58■■□□□ 1.36
ERCC2-201ENST00000391941 FRAT2O75474 233 aaPredicted RBP23.57■■□□□ 1.36
ERCC2-201ENST00000391941 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
ERCC2-201ENST00000391941 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
ERCC2-201ENST00000391941 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
ERCC2-201ENST00000391941 GSE1Q14687 1217 aa23.54■■□□□ 1.36
ERCC2-201ENST00000391941 PRDM15P57071 1507 aaPredicted RBP23.53■■□□□ 1.36
ERCC2-201ENST00000391941 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
ERCC2-201ENST00000391941 MAGI2Q86UL8 1455 aa23.52■■□□□ 1.36
ERCC2-201ENST00000391941 INSRP06213 1382 aa23.52■■□□□ 1.36
ERCC2-201ENST00000391941 APAF1O14727 1248 aa23.52■■□□□ 1.36
ERCC2-201ENST00000391941 DDRGK1Q96HY6 314 aa23.51■■□□□ 1.35
ERCC2-201ENST00000391941 ZMYM4Q5VZL5 1548 aa23.51■■□□□ 1.35
ERCC2-201ENST00000391941 GOLGA2Q08379 1002 aa23.5■■□□□ 1.35
ERCC2-201ENST00000391941 PLEKHH2Q8IVE3 1493 aa23.5■■□□□ 1.35
ERCC2-201ENST00000391941 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
ERCC2-201ENST00000391941 FAM161AQ3B820 660 aa23.49■■□□□ 1.35
ERCC2-201ENST00000391941 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
ERCC2-201ENST00000391941 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
ERCC2-201ENST00000391941 IGHDP01880 384 aa23.48■■□□□ 1.35
ERCC2-201ENST00000391941 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
ERCC2-201ENST00000391941 SEC24BO95487 1268 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms