RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 ZNF687Q8N1G0 1237 aa7.24□□□□□ -1.25
RNU6-550P-201ENST00000391057 KCNK17Q96T54 332 aa7.24□□□□□ -1.25
RNU6-550P-201ENST00000391057 CDHR5Q9HBB8 845 aa7.24□□□□□ -1.25
RNU6-550P-201ENST00000391057 POTEB3A0JP26 581 aa7.23□□□□□ -1.25
RNU6-550P-201ENST00000391057 PBX2P40425 430 aa7.23□□□□□ -1.25
RNU6-550P-201ENST00000391057 POTEBQ6S5H4 581 aa7.23□□□□□ -1.25
RNU6-550P-201ENST00000391057 POTEGQ6S5H5 508 aa7.23□□□□□ -1.25
RNU6-550P-201ENST00000391057 POTEMA6NI47 508 aa7.22□□□□□ -1.25
RNU6-550P-201ENST00000391057 PPP1R3GB7ZBB8 358 aa7.22□□□□□ -1.25
RNU6-550P-201ENST00000391057 ARHGAP33O14559 1287 aa7.22□□□□□ -1.25
RNU6-550P-201ENST00000391057 FCHSD2O94868 740 aa7.22□□□□□ -1.25
RNU6-550P-201ENST00000391057 CERKQ8TCT0 537 aa7.22□□□□□ -1.25
RNU6-550P-201ENST00000391057 COL9A1P20849 921 aa7.2□□□□□ -1.26
RNU6-550P-201ENST00000391057 PSEN2P49810 448 aa7.2□□□□□ -1.26
RNU6-550P-201ENST00000391057 PTGDRQ13258 359 aa7.2□□□□□ -1.26
RNU6-550P-201ENST00000391057 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
RNU6-550P-201ENST00000391057 AXIN2Q9Y2T1 843 aa7.2□□□□□ -1.26
RNU6-550P-201ENST00000391057 GPR37O15354 613 aa7.19□□□□□ -1.26
RNU6-550P-201ENST00000391057 HIC1Q14526 733 aa7.19□□□□□ -1.26
RNU6-550P-201ENST00000391057 TPRNQ4KMQ1 711 aa7.19□□□□□ -1.26
RNU6-550P-201ENST00000391057 POTEEQ6S8J3 1075 aa7.19□□□□□ -1.26
RNU6-550P-201ENST00000391057 GNPATO15228 680 aa7.18□□□□□ -1.26
RNU6-550P-201ENST00000391057 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
RNU6-550P-201ENST00000391057 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
RNU6-550P-201ENST00000391057 PRSS12P56730 875 aa7.16□□□□□ -1.26
RNU6-550P-201ENST00000391057 CDCA7LQ96GN5 454 aa7.16□□□□□ -1.26
RNU6-550P-201ENST00000391057 RBM27Q9P2N5 1060 aaKnown RBP7.16□□□□□ -1.26
RNU6-550P-201ENST00000391057 ZMYND10O75800 440 aa7.15□□□□□ -1.26
RNU6-550P-201ENST00000391057 LSM11P83369 360 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU6-550P-201ENST00000391057 PADI6Q6TGC4 694 aa7.15□□□□□ -1.26
RNU6-550P-201ENST00000391057 CDAN1Q8IWY9 1227 aa7.15□□□□□ -1.26
RNU6-550P-201ENST00000391057 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
RNU6-550P-201ENST00000391057 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
RNU6-550P-201ENST00000391057 PROX2Q3B8N5 592 aa7.14□□□□□ -1.27
RNU6-550P-201ENST00000391057 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
RNU6-550P-201ENST00000391057 FECHP22830 423 aa7.13□□□□□ -1.27
RNU6-550P-201ENST00000391057 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
RNU6-550P-201ENST00000391057 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
RNU6-550P-201ENST00000391057 KRI1Q8N9T8 703 aaKnown RBP7.13□□□□□ -1.27
RNU6-550P-201ENST00000391057 TK2O00142 265 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 ANKRD13DQ6ZTN6 518 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 TTC13Q8NBP0 860 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 VPS9D1Q9Y2B5 631 aa7.12□□□□□ -1.27
RNU6-550P-201ENST00000391057 NBPF26B4DH59 902 aa7.11□□□□□ -1.27
RNU6-550P-201ENST00000391057 ADGRD1Q6QNK2 874 aa7.11□□□□□ -1.27
RNU6-550P-201ENST00000391057 PACS2Q86VP3 889 aa7.11□□□□□ -1.27
RNU6-550P-201ENST00000391057 MINK1Q8N4C8 1332 aaPredicted RBP7.1□□□□□ -1.27
RNU6-550P-201ENST00000391057 PRKCSHP14314 528 aaPredicted RBP7.1□□□□□ -1.27
RNU6-550P-201ENST00000391057 FAM198AQ9UFP1 575 aa7.1□□□□□ -1.27
RNU6-550P-201ENST00000391057 RABGEF1Q9UJ41 708 aa7.1□□□□□ -1.27
RNU6-550P-201ENST00000391057 KIAA1468Q9P260 1216 aa7.09□□□□□ -1.27
RNU6-550P-201ENST00000391057 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
RNU6-550P-201ENST00000391057 IRF6O14896 467 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 CCDC102AQ96A19 550 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 STAC3Q96MF2 364 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 NBPF3Q9H094 633 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 SLC24A3Q9HC58 644 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 PCDH10Q9P2E7 1040 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 ADGRG1Q9Y653 693 aa7.08□□□□□ -1.28
RNU6-550P-201ENST00000391057 OATP04181 439 aa7.07□□□□□ -1.28
RNU6-550P-201ENST00000391057 FAM161AQ3B820 660 aa7.07□□□□□ -1.28
RNU6-550P-201ENST00000391057 NUDT18Q6ZVK8 323 aa7.07□□□□□ -1.28
RNU6-550P-201ENST00000391057 RBM46Q8TBY0 533 aaKnown RBP7.07□□□□□ -1.28
RNU6-550P-201ENST00000391057 TATDN2Q93075 761 aa7.07□□□□□ -1.28
RNU6-550P-201ENST00000391057 AK7Q96M32 723 aa7.06□□□□□ -1.28
RNU6-550P-201ENST00000391057 SEPT9Q9UHD8 586 aaPredicted RBP7.06□□□□□ -1.28
RNU6-550P-201ENST00000391057 C3orf80F5H4A9 247 aa7.05□□□□□ -1.28
RNU6-550P-201ENST00000391057 SMAPO00193 183 aa7.05□□□□□ -1.28
RNU6-550P-201ENST00000391057 HRO43593 1189 aa7.05□□□□□ -1.28
RNU6-550P-201ENST00000391057 MRPL50Q8N5N7 158 aaKnown RBP7.05□□□□□ -1.28
RNU6-550P-201ENST00000391057 BHMG1C9JSJ3 638 aaPredicted RBP7.04□□□□□ -1.28
RNU6-550P-201ENST00000391057 METTL3Q86U44 580 aaKnown RBP7.04□□□□□ -1.28
RNU6-550P-201ENST00000391057 LAPTM4BQ86VI4 370 aa7.04□□□□□ -1.28
RNU6-550P-201ENST00000391057 PXYLP1Q8TE99 480 aa7.04□□□□□ -1.28
RNU6-550P-201ENST00000391057 GOLGA8CPA6NN73 597 aa7.03□□□□□ -1.28
RNU6-550P-201ENST00000391057 FAM98CQ17RN3 349 aaKnown RBP7.03□□□□□ -1.28
RNU6-550P-201ENST00000391057 EYA1Q99502 592 aa7.03□□□□□ -1.28
RNU6-550P-201ENST00000391057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
RNU6-550P-201ENST00000391057 DNAJB2P25686 324 aa7.02□□□□□ -1.29
RNU6-550P-201ENST00000391057 RCCD1A6NED2 376 aa7.01□□□□□ -1.29
RNU6-550P-201ENST00000391057 TRIM66O15016 1216 aa7.01□□□□□ -1.29
RNU6-550P-201ENST00000391057 HDGFP51858 240 aaKnown RBP6.99□□□□□ -1.29
RNU6-550P-201ENST00000391057 AMHR2Q16671 573 aa6.99□□□□□ -1.29
RNU6-550P-201ENST00000391057 NLRP7Q8WX94 980 aa6.99□□□□□ -1.29
RNU6-550P-201ENST00000391057 ZFRQ96KR1 1074 aaKnown RBP6.99□□□□□ -1.29
RNU6-550P-201ENST00000391057 PHOX2BQ99453 314 aa6.99□□□□□ -1.29
RNU6-550P-201ENST00000391057 CLCN1P35523 988 aa6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 PDE4DQ08499 809 aa6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 TTLL12Q14166 644 aaPredicted RBP6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 ANKK1Q8NFD2 765 aa6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 TMEM134Q9H6X4 195 aa6.98□□□□□ -1.29
RNU6-550P-201ENST00000391057 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 SWT1Q5T5J6 900 aaKnown RBP6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 SAMD7Q7Z3H4 446 aa6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 WNT2BQ93097 391 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms