RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PDIA6Q15084 440 aa6.08□□□□□ -1.44
SNORA40.19-201ENST00000390846 TSR1Q2NL82 804 aaKnown RBP6.08□□□□□ -1.44
SNORA40.19-201ENST00000390846 KIAA1468Q9P260 1216 aa6.08□□□□□ -1.44
SNORA40.19-201ENST00000390846 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
SNORA40.19-201ENST00000390846 ARIH1Q9Y4X5 557 aaPredicted RBP6.08□□□□□ -1.44
SNORA40.19-201ENST00000390846 A0A0G2JS52 829 aa6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 ONECUT3O60422 494 aaPredicted RBP6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 ITGBL1O95965 494 aaPredicted RBP6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 BCAMP50895 628 aa6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 MRPL50Q8N5N7 158 aaKnown RBP6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 FBXW7Q969H0 707 aa6.07□□□□□ -1.44
SNORA40.19-201ENST00000390846 SOWAHBA6NEL2 793 aa6.06□□□□□ -1.44
SNORA40.19-201ENST00000390846 DDX12PQ92771 950 aa6.06□□□□□ -1.44
SNORA40.19-201ENST00000390846 EPAS1Q99814 870 aa6.06□□□□□ -1.44
SNORA40.19-201ENST00000390846 TRIM6-TRIM34B2RNG4 842 aa6.05□□□□□ -1.44
SNORA40.19-201ENST00000390846 ZFRQ96KR1 1074 aaKnown RBP6.05□□□□□ -1.44
SNORA40.19-201ENST00000390846 RTN4Q9NQC3 1192 aaKnown RBP6.05□□□□□ -1.44
SNORA40.19-201ENST00000390846 EN1Q05925 392 aaPredicted RBP6.04□□□□□ -1.44
SNORA40.19-201ENST00000390846 LAPTM4BQ86VI4 370 aa6.04□□□□□ -1.44
SNORA40.19-201ENST00000390846 WBP1LQ9NX94 342 aa6.04□□□□□ -1.44
SNORA40.19-201ENST00000390846 SEPT9Q9UHD8 586 aaPredicted RBP6.04□□□□□ -1.44
SNORA40.19-201ENST00000390846 LCE2BO14633 110 aa6.03□□□□□ -1.44
SNORA40.19-201ENST00000390846 OSBPP22059 807 aa6.03□□□□□ -1.44
SNORA40.19-201ENST00000390846 RBM33Q96EV2 1170 aaKnown RBP6.03□□□□□ -1.44
SNORA40.19-201ENST00000390846 NPDC1Q9NQX5 325 aaPredicted RBP6.03□□□□□ -1.44
SNORA40.19-201ENST00000390846 DCAF8L2P0C7V8 631 aa6.02□□□□□ -1.45
SNORA40.19-201ENST00000390846 KCNH8Q96L42 1107 aa6.02□□□□□ -1.45
SNORA40.19-201ENST00000390846 NBPF3Q9H094 633 aa6.02□□□□□ -1.45
SNORA40.19-201ENST00000390846 TTC13Q8NBP0 860 aa6.01□□□□□ -1.45
SNORA40.19-201ENST00000390846 CDHR5Q9HBB8 845 aa6.01□□□□□ -1.45
SNORA40.19-201ENST00000390846 RGS20O76081 388 aa6□□□□□ -1.45
SNORA40.19-201ENST00000390846 FAM98CQ17RN3 349 aaKnown RBP5.99□□□□□ -1.45
SNORA40.19-201ENST00000390846 STAC3Q96MF2 364 aa5.99□□□□□ -1.45
SNORA40.19-201ENST00000390846 SMAPO00193 183 aa5.98□□□□□ -1.45
SNORA40.19-201ENST00000390846 NBR1Q14596 966 aa5.98□□□□□ -1.45
SNORA40.19-201ENST00000390846 SPRYD3Q8NCJ5 442 aa5.98□□□□□ -1.45
SNORA40.19-201ENST00000390846 SPDYE16A6NNV3 312 aaPredicted RBP5.97□□□□□ -1.45
SNORA40.19-201ENST00000390846 E2F4Q16254 413 aa5.97□□□□□ -1.45
SNORA40.19-201ENST00000390846 TJAP1Q5JTD0 557 aa5.97□□□□□ -1.45
SNORA40.19-201ENST00000390846 ANKK1Q8NFD2 765 aa5.97□□□□□ -1.45
SNORA40.19-201ENST00000390846 CDCA7LQ96GN5 454 aa5.97□□□□□ -1.45
SNORA40.19-201ENST00000390846 PRSS12P56730 875 aa5.96□□□□□ -1.46
SNORA40.19-201ENST00000390846 GOLGA8CPA6NN73 597 aa5.95□□□□□ -1.46
SNORA40.19-201ENST00000390846 TSR3Q9UJK0 312 aaKnown RBP5.94□□□□□ -1.46
SNORA40.19-201ENST00000390846 MAP3K7O43318 606 aa5.93□□□□□ -1.46
SNORA40.19-201ENST00000390846 PAXIP1Q6ZW49 1069 aaPredicted RBP5.93□□□□□ -1.46
SNORA40.19-201ENST00000390846 SAMD7Q7Z3H4 446 aa5.93□□□□□ -1.46
SNORA40.19-201ENST00000390846 TATDN2Q93075 761 aa5.93□□□□□ -1.46
SNORA40.19-201ENST00000390846 HPS5Q9UPZ3 1129 aa5.93□□□□□ -1.46
SNORA40.19-201ENST00000390846 GRXCR2A6NFK2 248 aa5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 MLLT3P42568 568 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 NYAP1Q6ZVC0 841 aa5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 EYA1Q99502 592 aa5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 TSHZ2Q9NRE2 1034 aa5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.19-201ENST00000390846 APLP1P51693 650 aa5.91□□□□□ -1.46
SNORA40.19-201ENST00000390846 ZNF516Q92618 1163 aa5.91□□□□□ -1.46
SNORA40.19-201ENST00000390846 EMID1Q96A84 441 aaPredicted RBP5.91□□□□□ -1.46
SNORA40.19-201ENST00000390846 KCNC4Q03721 635 aa5.9□□□□□ -1.46
SNORA40.19-201ENST00000390846 AMER1Q5JTC6 1135 aaPredicted RBP5.9□□□□□ -1.46
SNORA40.19-201ENST00000390846 RBM27Q9P2N5 1060 aaKnown RBP5.9□□□□□ -1.46
SNORA40.19-201ENST00000390846 NUDT18Q6ZVK8 323 aa5.89□□□□□ -1.47
SNORA40.19-201ENST00000390846 PACS2Q86VP3 889 aa5.89□□□□□ -1.47
SNORA40.19-201ENST00000390846 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
SNORA40.19-201ENST00000390846 CFAP44Q96MT7 982 aa5.89□□□□□ -1.47
SNORA40.19-201ENST00000390846 PADI6Q6TGC4 694 aa5.88□□□□□ -1.47
SNORA40.19-201ENST00000390846 NKX2-3Q8TAU0 364 aa5.88□□□□□ -1.47
SNORA40.19-201ENST00000390846 KCNV2Q8TDN2 545 aa5.88□□□□□ -1.47
SNORA40.19-201ENST00000390846 MTRQ99707 1265 aa5.88□□□□□ -1.47
SNORA40.19-201ENST00000390846 IRX2Q9BZI1 471 aaPredicted RBP5.88□□□□□ -1.47
SNORA40.19-201ENST00000390846 PNMA3Q9UL41 463 aa5.87□□□□□ -1.47
SNORA40.19-201ENST00000390846 CERKQ8TCT0 537 aa5.86□□□□□ -1.47
SNORA40.19-201ENST00000390846 PTGDRQ13258 359 aa5.85□□□□□ -1.47
SNORA40.19-201ENST00000390846 SWT1Q5T5J6 900 aaKnown RBP5.85□□□□□ -1.47
SNORA40.19-201ENST00000390846 PPP4CP60510 307 aa5.84□□□□□ -1.47
SNORA40.19-201ENST00000390846 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
SNORA40.19-201ENST00000390846 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.84□□□□□ -1.47
SNORA40.19-201ENST00000390846 ARHGEF1Q92888 912 aaKnown RBP5.83□□□□□ -1.48
SNORA40.19-201ENST00000390846 NBPF26B4DH59 902 aa5.82□□□□□ -1.48
SNORA40.19-201ENST00000390846 FAM161AQ3B820 660 aa5.82□□□□□ -1.48
SNORA40.19-201ENST00000390846 TRIM67Q6ZTA4 783 aa5.82□□□□□ -1.48
SNORA40.19-201ENST00000390846 GPR37O15354 613 aa5.81□□□□□ -1.48
SNORA40.19-201ENST00000390846 IL21Q9HBE4 155 aa5.81□□□□□ -1.48
SNORA40.19-201ENST00000390846 ADGRG1Q9Y653 693 aa5.81□□□□□ -1.48
SNORA40.19-201ENST00000390846 SLC10A3P09131 477 aa5.8□□□□□ -1.48
SNORA40.19-201ENST00000390846 WDR70Q9NW82 654 aa5.79□□□□□ -1.48
SNORA40.19-201ENST00000390846 SEMA3EO15041 775 aa5.78□□□□□ -1.48
SNORA40.19-201ENST00000390846 PRKD2Q9BZL6 878 aa5.78□□□□□ -1.48
SNORA40.19-201ENST00000390846 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.78□□□□□ -1.48
SNORA40.19-201ENST00000390846 ZPR1O75312 459 aa5.77□□□□□ -1.49
SNORA40.19-201ENST00000390846 FECHP22830 423 aa5.77□□□□□ -1.49
SNORA40.19-201ENST00000390846 TMEM134Q9H6X4 195 aa5.77□□□□□ -1.49
SNORA40.19-201ENST00000390846 COPS2P61201 443 aa5.76□□□□□ -1.49
SNORA40.19-201ENST00000390846 BLOC1S3Q6QNY0 202 aa5.76□□□□□ -1.49
SNORA40.19-201ENST00000390846 V9GY48 417 aaPredicted RBP5.76□□□□□ -1.49
SNORA40.19-201ENST00000390846 TESPA1A2RU30 521 aaPredicted RBP5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 RCCD1A6NED2 376 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 RNF223E7ERA6 249 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 TLL1O43897 1013 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 GFRA3O60609 400 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms