RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 PPARGC1BQ86YN6 1023 aaKnown RBP23.04■■□□□ 1.28
SNRPN-202ENST00000390687 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
SNRPN-202ENST00000390687 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
SNRPN-202ENST00000390687 KIF15Q9NS87 1388 aa23.03■■□□□ 1.28
SNRPN-202ENST00000390687 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.28
SNRPN-202ENST00000390687 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
SNRPN-202ENST00000390687 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
SNRPN-202ENST00000390687 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
SNRPN-202ENST00000390687 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
SNRPN-202ENST00000390687 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
SNRPN-202ENST00000390687 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
SNRPN-202ENST00000390687 ANKRD30AQ9BXX3 1397 aa22.97■■□□□ 1.27
SNRPN-202ENST00000390687 NCOA1Q15788 1441 aa22.97■■□□□ 1.27
SNRPN-202ENST00000390687 STRCQ7RTU9 1775 aa22.95■■□□□ 1.26
SNRPN-202ENST00000390687 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
SNRPN-202ENST00000390687 PZPP20742 1482 aa22.93■■□□□ 1.26
SNRPN-202ENST00000390687 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
SNRPN-202ENST00000390687 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
SNRPN-202ENST00000390687 ABCC3O15438 1527 aa22.92■■□□□ 1.26
SNRPN-202ENST00000390687 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
SNRPN-202ENST00000390687 ADGRL2O95490 1459 aa22.9■■□□□ 1.26
SNRPN-202ENST00000390687 TNRQ92752 1358 aa22.89■■□□□ 1.26
SNRPN-202ENST00000390687 ILDR1Q86SU0 546 aaPredicted RBP22.89■■□□□ 1.26
SNRPN-202ENST00000390687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.262e-8■■□□□ 12.6
SNRPN-202ENST00000390687 CAMSAP1Q5T5Y3 1602 aa22.87■■□□□ 1.25
SNRPN-202ENST00000390687 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
SNRPN-202ENST00000390687 ZC3H13Q5T200 1668 aaKnown RBP22.86■■□□□ 1.25
SNRPN-202ENST00000390687 ZNF142P52746 1687 aaPredicted RBP22.85■■□□□ 1.25
SNRPN-202ENST00000390687 NCKAP5LQ9HCH0 1330 aa22.85■■□□□ 1.25
SNRPN-202ENST00000390687 A2ML1A8K2U0 1454 aa22.84■■□□□ 1.25
SNRPN-202ENST00000390687 PRDM15P57071 1507 aaPredicted RBP22.84■■□□□ 1.25
SNRPN-202ENST00000390687 PTPRTO14522 1441 aa22.83■■□□□ 1.25
SNRPN-202ENST00000390687 CEP152O94986 1710 aa22.83■■□□□ 1.24
SNRPN-202ENST00000390687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNRPN-202ENST00000390687 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
SNRPN-202ENST00000390687 ITGAEP38570 1179 aa22.82■■□□□ 1.24
SNRPN-202ENST00000390687 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
SNRPN-202ENST00000390687 KANK1Q14678 1352 aa22.81■■□□□ 1.24
SNRPN-202ENST00000390687 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
SNRPN-202ENST00000390687 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
SNRPN-202ENST00000390687 PKD2Q13563 968 aa22.79■■□□□ 1.24
SNRPN-202ENST00000390687 SPATA31D1Q6ZQQ2 1576 aa22.79■■□□□ 1.24
SNRPN-202ENST00000390687 ERVK-7P63135 1459 aa22.79■■□□□ 1.24
SNRPN-202ENST00000390687 ARHGAP31Q2M1Z3 1444 aa22.79■■□□□ 1.24
SNRPN-202ENST00000390687 NLRP1Q9C000 1473 aa22.78■■□□□ 1.24
SNRPN-202ENST00000390687 ROCK1Q13464 1354 aa22.78■■□□□ 1.24
SNRPN-202ENST00000390687 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
SNRPN-202ENST00000390687 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
SNRPN-202ENST00000390687 CERKQ8TCT0 537 aa22.76■■□□□ 1.23
SNRPN-202ENST00000390687 FBXO41Q8TF61 875 aa22.75■■□□□ 1.23
SNRPN-202ENST00000390687 LMTK2Q8IWU2 1503 aa22.74■■□□□ 1.23
SNRPN-202ENST00000390687 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
SNRPN-202ENST00000390687 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
SNRPN-202ENST00000390687 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
SNRPN-202ENST00000390687 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
SNRPN-202ENST00000390687 IDI1Q13907 227 aa22.64■■□□□ 1.21
SNRPN-202ENST00000390687 ZNF335Q9H4Z2 1342 aaPredicted RBP22.64■■□□□ 1.21
SNRPN-202ENST00000390687 LTBP4Q8N2S1 1624 aa22.64■■□□□ 1.21
SNRPN-202ENST00000390687 NEURL4Q96JN8 1562 aa22.63■■□□□ 1.21
SNRPN-202ENST00000390687 NOS1P29475 1434 aa22.62■■□□□ 1.21
SNRPN-202ENST00000390687 UNC13BO14795 1591 aa22.62■■□□□ 1.21
SNRPN-202ENST00000390687 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
SNRPN-202ENST00000390687 UBR1Q8IWV7 1749 aa22.61■■□□□ 1.21
SNRPN-202ENST00000390687 NUP155O75694 1391 aa22.6■■□□□ 1.21
SNRPN-202ENST00000390687 MED14O60244 1454 aa22.59■■□□□ 1.21
SNRPN-202ENST00000390687 SYNMO15061 1565 aa22.59■■□□□ 1.21
SNRPN-202ENST00000390687 RPRD2Q5VT52 1461 aaKnown RBP22.58■■□□□ 1.21
SNRPN-202ENST00000390687 TET3O43151 1660 aa22.58■■□□□ 1.21
SNRPN-202ENST00000390687 LTKP29376 864 aa22.57■■□□□ 1.2
SNRPN-202ENST00000390687 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
SNRPN-202ENST00000390687 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
SNRPN-202ENST00000390687 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
SNRPN-202ENST00000390687 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
SNRPN-202ENST00000390687 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
SNRPN-202ENST00000390687 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
SNRPN-202ENST00000390687 NAIPQ13075 1403 aa22.55■■□□□ 1.2
SNRPN-202ENST00000390687 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
SNRPN-202ENST00000390687 SLIT1O75093 1534 aa22.54■■□□□ 1.2
SNRPN-202ENST00000390687 GCC2Q8IWJ2 1684 aa22.54■■□□□ 1.2
SNRPN-202ENST00000390687 TMEM2Q9UHN6 1383 aa22.53■■□□□ 1.2
SNRPN-202ENST00000390687 EID1Q9Y6B2 187 aa22.52■■□□□ 1.19
SNRPN-202ENST00000390687 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
SNRPN-202ENST00000390687 E9PCH4 1651 aa22.5■■□□□ 1.19
SNRPN-202ENST00000390687 KDM5AP29375 1690 aaKnown RBP22.5■■□□□ 1.19
SNRPN-202ENST00000390687 IQGAP1P46940 1657 aa22.49■■□□□ 1.19
SNRPN-202ENST00000390687 IQSEC2Q5JU85 1478 aa22.48■■□□□ 1.19
SNRPN-202ENST00000390687 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
SNRPN-202ENST00000390687 ADGRB3O60242 1522 aa22.45■■□□□ 1.18
SNRPN-202ENST00000390687 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
SNRPN-202ENST00000390687 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
SNRPN-202ENST00000390687 CPS1P31327 1500 aa22.41■■□□□ 1.18
SNRPN-202ENST00000390687 TMEM131LA2VDJ0 1609 aa22.4■■□□□ 1.18
SNRPN-202ENST00000390687 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
SNRPN-202ENST00000390687 UBAP1LF5GYI3 381 aa22.38■■□□□ 1.17
SNRPN-202ENST00000390687 ZFYVE9O95405 1425 aa22.37■■□□□ 1.17
SNRPN-202ENST00000390687 SLC26A8Q96RN1 970 aa22.37■■□□□ 1.17
SNRPN-202ENST00000390687 HDGFP51858 240 aaKnown RBP22.36■■□□□ 1.17
SNRPN-202ENST00000390687 STRCP1A6NGW2 1772 aa22.36■■□□□ 1.17
SNRPN-202ENST00000390687 RIMS2Q9UQ26 1411 aa22.36■■□□□ 1.17
SNRPN-202ENST00000390687 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms