RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
COL23A1-201ENST00000390654 RRP1P56182 461 aaKnown RBP28.06■■■□□ 2.08
COL23A1-201ENST00000390654 RCAN3Q9UKA8 241 aa28.05■■■□□ 2.08
COL23A1-201ENST00000390654 ARID4BQ4LE39 1312 aaPredicted RBP28.05■■■□□ 2.08
COL23A1-201ENST00000390654 ADGRL2O95490 1459 aa28.04■■■□□ 2.08
COL23A1-201ENST00000390654 RALGAPBQ86X10 1494 aa28.04■■■□□ 2.08
COL23A1-201ENST00000390654 ZBTB47Q9UFB7 747 aaPredicted RBP28.03■■■□□ 2.08
COL23A1-201ENST00000390654 IPO9Q96P70 1041 aaKnown RBP28.03■■■□□ 2.08
COL23A1-201ENST00000390654 PTPRGP23470 1445 aa28.02■■■□□ 2.08
COL23A1-201ENST00000390654 RALBP1Q15311 655 aa28.02■■■□□ 2.08
COL23A1-201ENST00000390654 ADGBQ8N7X0 1667 aa28.01■■■□□ 2.08
COL23A1-201ENST00000390654 ITSN2Q9NZM3 1697 aa28.01■■■□□ 2.07
COL23A1-201ENST00000390654 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
COL23A1-201ENST00000390654 BRD4O60885 1362 aaPredicted RBP27.98■■■□□ 2.07
COL23A1-201ENST00000390654 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
COL23A1-201ENST00000390654 NLRP13Q86W25 1043 aa27.97■■■□□ 2.07
COL23A1-201ENST00000390654 NUP160Q12769 1436 aa27.97■■■□□ 2.07
COL23A1-201ENST00000390654 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.06
COL23A1-201ENST00000390654 PANK3Q9H999 370 aa27.92■■■□□ 2.06
COL23A1-201ENST00000390654 ABCC10Q5T3U5 1492 aa27.92■■■□□ 2.06
COL23A1-201ENST00000390654 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
COL23A1-201ENST00000390654 CROCC2H7BZ55 1655 aa27.91■■■□□ 2.06
COL23A1-201ENST00000390654 LAS1LQ9Y4W2 734 aaKnown RBP27.9■■■□□ 2.06
COL23A1-201ENST00000390654 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.06
COL23A1-201ENST00000390654 PER1O15534 1290 aaPredicted RBP27.88■■■□□ 2.05
COL23A1-201ENST00000390654 RTL5Q5HYW3 569 aaPredicted RBP27.88■■■□□ 2.05
COL23A1-201ENST00000390654 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
COL23A1-201ENST00000390654 DISP3Q9P2K9 1392 aa27.86■■■□□ 2.05
COL23A1-201ENST00000390654 PDE4AP27815 886 aa27.86■■■□□ 2.05
COL23A1-201ENST00000390654 ABCA8O94911 1581 aa27.84■■■□□ 2.05
COL23A1-201ENST00000390654 CRBNQ96SW2 442 aa27.83■■■□□ 2.05
COL23A1-201ENST00000390654 ARHGEF12Q9NZN5 1544 aa27.82■■■□□ 2.04
COL23A1-201ENST00000390654 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
COL23A1-201ENST00000390654 PARD3Q8TEW0 1356 aa27.81■■■□□ 2.04
COL23A1-201ENST00000390654 PRAG1Q86YV5 1406 aa27.81■■■□□ 2.04
COL23A1-201ENST00000390654 C20orf194Q5TEA3 1177 aa27.8■■■□□ 2.04
COL23A1-201ENST00000390654 FAM135AQ9P2D6 1515 aa27.8■■■□□ 2.04
COL23A1-201ENST00000390654 TESK2Q96S53 571 aa27.79■■■□□ 2.04
COL23A1-201ENST00000390654 ARHGAP5Q13017 1502 aa27.78■■■□□ 2.04
COL23A1-201ENST00000390654 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
COL23A1-201ENST00000390654 SYCP2Q9BX26 1530 aa27.76■■■□□ 2.04
COL23A1-201ENST00000390654 TCERG1O14776 1098 aaKnown RBP27.76■■■□□ 2.04
COL23A1-201ENST00000390654 ADAMTS8Q9UP79 889 aa27.76■■■□□ 2.04
COL23A1-201ENST00000390654 SHANK2Q9UPX8 1470 aa27.76■■■□□ 2.03
COL23A1-201ENST00000390654 PLEKHH2Q8IVE3 1493 aa27.75■■■□□ 2.03
COL23A1-201ENST00000390654 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
COL23A1-201ENST00000390654 TMF1P82094 1093 aa27.73■■■□□ 2.03
COL23A1-201ENST00000390654 PDE3BQ13370 1112 aa27.73■■■□□ 2.03
COL23A1-201ENST00000390654 BACH2Q9BYV9 841 aa27.73■■■□□ 2.03
COL23A1-201ENST00000390654 SAMD9LQ8IVG5 1584 aa27.73■■■□□ 2.03
COL23A1-201ENST00000390654 PLA2R1Q13018 1463 aa27.72■■■□□ 2.03
COL23A1-201ENST00000390654 A2MP01023 1474 aa27.71■■■□□ 2.03
COL23A1-201ENST00000390654 AFAP1Q8N556 730 aa27.69■■■□□ 2.02
COL23A1-201ENST00000390654 SLC4A3P48751 1232 aa27.68■■■□□ 2.02
COL23A1-201ENST00000390654 NEFMP07197 916 aa27.68■■■□□ 2.02
COL23A1-201ENST00000390654 ERBINQ96RT1 1412 aa27.66■■■□□ 2.02
COL23A1-201ENST00000390654 ERCC6L2Q5T890 1561 aa27.66■■■□□ 2.02
COL23A1-201ENST00000390654 CCDC146Q8IYE0 955 aa27.65■■■□□ 2.02
COL23A1-201ENST00000390654 KNSTRNQ9Y448 316 aa27.64■■■□□ 2.02
COL23A1-201ENST00000390654 E9PCH4 1651 aa27.64■■■□□ 2.01
COL23A1-201ENST00000390654 WDR43Q15061 677 aaKnown RBP eCLIP27.64■■■□□ 2.01
COL23A1-201ENST00000390654 CDC42BPBQ9Y5S2 1711 aa27.63■■■□□ 2.01
COL23A1-201ENST00000390654 RSPH4AQ5TD94 716 aa27.63■■■□□ 2.01
COL23A1-201ENST00000390654 TTC37Q6PGP7 1564 aa27.62■■■□□ 2.01
COL23A1-201ENST00000390654 TRPM1Q7Z4N2 1603 aa27.62■■■□□ 2.01
COL23A1-201ENST00000390654 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
COL23A1-201ENST00000390654 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
COL23A1-201ENST00000390654 PPP2R1AP30153 589 aa27.58■■■□□ 2.01
COL23A1-201ENST00000390654 RTN4Q9NQC3 1192 aaKnown RBP27.57■■■□□ 2
COL23A1-201ENST00000390654 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
COL23A1-201ENST00000390654 GPRASP1Q5JY77 1395 aa27.56■■■□□ 2
COL23A1-201ENST00000390654 PLEKHH1Q9ULM0 1364 aa27.56■■■□□ 2
COL23A1-201ENST00000390654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.56■■■□□ 2
COL23A1-201ENST00000390654 ARHGEF5Q12774 1597 aa27.55■■■□□ 2
COL23A1-201ENST00000390654 RGS3P49796 1198 aa27.55■■■□□ 2
COL23A1-201ENST00000390654 MS4A1P11836 297 aa27.54■■■□□ 2
COL23A1-201ENST00000390654 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
COL23A1-201ENST00000390654 WASHC2CQ9Y4E1 1318 aa27.51■■■□□ 2
COL23A1-201ENST00000390654 PREX2Q70Z35 1606 aa27.51■■□□□ 1.99
COL23A1-201ENST00000390654 DUSP27Q5VZP5 1158 aa27.51■■□□□ 1.99
COL23A1-201ENST00000390654 SPAG9O60271 1321 aaKnown RBP27.51■■□□□ 1.99
COL23A1-201ENST00000390654 IL27Q8NEV9 243 aa27.51■■□□□ 1.99
COL23A1-201ENST00000390654 TRAPPC8Q9Y2L5 1435 aa27.5■■□□□ 1.99
COL23A1-201ENST00000390654 MAGI2Q86UL8 1455 aa27.5■■□□□ 1.99
COL23A1-201ENST00000390654 CHD1O14646 1710 aa27.48■■□□□ 1.99
COL23A1-201ENST00000390654 CHGAP10645 457 aaKnown RBP27.48■■□□□ 1.99
COL23A1-201ENST00000390654 SPINK5Q9NQ38 1064 aaPredicted RBP27.48■■□□□ 1.99
COL23A1-201ENST00000390654 GOLGA2Q08379 1002 aa27.48■■□□□ 1.99
COL23A1-201ENST00000390654 KIF3BO15066 747 aa27.47■■□□□ 1.99
COL23A1-201ENST00000390654 AMER1Q5JTC6 1135 aaPredicted RBP27.47■■□□□ 1.99
COL23A1-201ENST00000390654 PRDM15P57071 1507 aaPredicted RBP27.47■■□□□ 1.99
COL23A1-201ENST00000390654 APAF1O14727 1248 aa27.46■■□□□ 1.99
COL23A1-201ENST00000390654 BCAR3O75815 825 aa27.44■■□□□ 1.98
COL23A1-201ENST00000390654 DAXXQ9UER7 740 aaPredicted RBP27.42■■□□□ 1.98
COL23A1-201ENST00000390654 ZMYM4Q5VZL5 1548 aa27.4■■□□□ 1.98
COL23A1-201ENST00000390654 TNNT2P45379 298 aaPredicted RBP27.4■■□□□ 1.98
COL23A1-201ENST00000390654 WDR7Q9Y4E6 1490 aa27.4■■□□□ 1.98
COL23A1-201ENST00000390654 NEUROD2Q15784 382 aa27.39■■□□□ 1.98
COL23A1-201ENST00000390654 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
COL23A1-201ENST00000390654 KDM2BQ8NHM5 1336 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms