RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 AXIN1O15169 862 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 PSPNO60542 156 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 PROCP04070 461 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 NUDT7P0C024 238 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 SNRPBP14678 240 aaKnown RBP0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 GGCXP38435 758 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 PSEN2P49810 448 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 CTC1Q2NKJ3 1217 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 ZMYM1Q5SVZ6 1142 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 NBPF11Q86T75 865 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 MRPL50Q8N5N7 158 aaKnown RBP0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 ANKK1Q8NFD2 765 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 KHSRPQ92945 711 aaKnown RBP eCLIP0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 KIFC2Q96AC6 838 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 TRIM47Q96LD4 638 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 KCNK17Q96T54 332 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 NBPF3Q9H094 633 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 WDR26Q9H7D7 661 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 WBP1LQ9NX94 342 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 NXF1Q9UBU9 619 aaKnown RBP0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 DACH1Q9UI36 760 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 LHX6Q9UPM6 363 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 SLC19A1P41440 591 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 BAG6P46379 1132 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 SMCPP49901 116 aaPredicted RBP0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 PLA2G4EQ3MJ16 856 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 PPP4R3BQ5MIZ7 849 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 MCTP1Q6DN14 999 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 PPP1R18Q6NYC8 613 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 LMOD2Q6P5Q4 547 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 ILDR1Q86SU0 546 aaPredicted RBP0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 RASEFQ8IZ41 740 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 SCARF2Q96GP6 870 aaPredicted RBP0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 SLC4A5Q9BY07 1137 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 ZFP64Q9NPA5 681 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 ATP13A2Q9NQ11 1180 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 EIF4ENIF1Q9NRA8 985 aaKnown RBP0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 ADAMTS8Q9UP79 889 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 HMCN1Q96RW7 5635 aa0.44□□□□□ -2.34
TRAJ28-201ENST00000390509 ERBB4Q15303 1308 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 SOWAHBA6NEL2 793 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 BHMG1C9JSJ3 638 aaPredicted RBP0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 TNFRSF10AO00220 468 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 PLEKHG5O94827 1062 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 AVPP01185 164 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 FURINP09958 794 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 ATXN8OSP0DMR3 200 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 VSIG8P0DPA2 414 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 BCAMP50895 628 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 MARSP56192 900 aaKnown RBP0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 JAG1P78504 1218 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 ARTNQ5T4W7 220 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 LCE4AQ5TA78 99 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 ZNF598Q86UK7 904 aaKnown RBP0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 FMNL2Q96PY5 1086 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 TMUB1Q9BVT8 246 aa0.43□□□□□ -2.34
TRAJ28-201ENST00000390509 PHF20L1A8MW92 1017 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 GDF9O60383 454 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 VEGFBP49765 207 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 TJAP1Q5JTD0 557 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 ZNF697Q5TEC3 545 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 SPRYD7Q5W111 196 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 TMEM92Q6UXU6 159 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 FAM212AQ96EL1 285 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 DCAF5Q96JK2 942 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 IL21Q9HBE4 155 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 PCDHGA4Q9Y5G9 962 aa0.42□□□□□ -2.34
TRAJ28-201ENST00000390509 SLC34A2O95436 690 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 ITGB2P05107 769 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 COL9A1P20849 921 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 KRTAP5-9P26371 169 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 LAPTM4BQ86VI4 370 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 MICALL2Q8IY33 904 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 SVOPQ8N4V2 548 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 MTRQ99707 1265 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 SEMA6BQ9H3T3 888 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 TSR3Q9UJK0 312 aaKnown RBP0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 HPS5Q9UPZ3 1129 aa0.41□□□□□ -2.34
TRAJ28-201ENST00000390509 IGHA2P01877 340 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 PTPREP23469 700 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 ITGB7P26010 798 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 FOXC1Q12948 553 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 COL9A3Q14050 684 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 LRP8Q14114 963 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 FOXD4L6Q3SYB3 417 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 ZNF385CQ66K41 422 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 FOXD4L3Q6VB84 417 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 PODNQ7Z5L7 613 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 ZNF467Q7Z7K2 595 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 CYP4X1Q8N118 509 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 LRCH3Q96II8 777 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 CSRNP1Q96S65 589 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 ZBED2Q9BTP6 218 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 KRTAP9-3Q9BYQ3 159 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 BCL2L12Q9HB09 334 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 AVENQ9NQS1 362 aaPredicted RBP0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 FOXD4L1Q9NU39 408 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 TOR4AQ9NXH8 423 aa0.4□□□□□ -2.35
TRAJ28-201ENST00000390509 CDKN2AIPQ9NXV6 580 aaPredicted RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms