RNA–Protein interactions for RNA: ENST00000390277.3

IGKV3D-11-201, Transcript of immunoglobulin kappa variable 3D-11, humanhuman

APPRIS P1 BASIC

Gene IGKV3D-11, Length 444 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-11-201ENST00000390277 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
IGKV3D-11-201ENST00000390277 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
IGKV3D-11-201ENST00000390277 ADGBQ8N7X0 1667 aa13.04□□□□□ -0.32
IGKV3D-11-201ENST00000390277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
IGKV3D-11-201ENST00000390277 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
IGKV3D-11-201ENST00000390277 CCDC18Q5T9S5 1454 aa13.03□□□□□ -0.32
IGKV3D-11-201ENST00000390277 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
IGKV3D-11-201ENST00000390277 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.32
IGKV3D-11-201ENST00000390277 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.33
IGKV3D-11-201ENST00000390277 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
IGKV3D-11-201ENST00000390277 PZPP20742 1482 aa13□□□□□ -0.33
IGKV3D-11-201ENST00000390277 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
IGKV3D-11-201ENST00000390277 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
IGKV3D-11-201ENST00000390277 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
IGKV3D-11-201ENST00000390277 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
IGKV3D-11-201ENST00000390277 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
IGKV3D-11-201ENST00000390277 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
IGKV3D-11-201ENST00000390277 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.34
IGKV3D-11-201ENST00000390277 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
IGKV3D-11-201ENST00000390277 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
IGKV3D-11-201ENST00000390277 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
IGKV3D-11-201ENST00000390277 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
IGKV3D-11-201ENST00000390277 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
IGKV3D-11-201ENST00000390277 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
IGKV3D-11-201ENST00000390277 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
IGKV3D-11-201ENST00000390277 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
IGKV3D-11-201ENST00000390277 ROBO1Q9Y6N7 1651 aa12.9□□□□□ -0.34
IGKV3D-11-201ENST00000390277 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
IGKV3D-11-201ENST00000390277 KIF3BO15066 747 aa12.9□□□□□ -0.34
IGKV3D-11-201ENST00000390277 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
IGKV3D-11-201ENST00000390277 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
IGKV3D-11-201ENST00000390277 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
IGKV3D-11-201ENST00000390277 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
IGKV3D-11-201ENST00000390277 SCAF11Q99590 1463 aaKnown RBP12.88□□□□□ -0.35
IGKV3D-11-201ENST00000390277 JCADQ9P266 1359 aa12.87□□□□□ -0.35
IGKV3D-11-201ENST00000390277 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
IGKV3D-11-201ENST00000390277 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
IGKV3D-11-201ENST00000390277 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
IGKV3D-11-201ENST00000390277 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
IGKV3D-11-201ENST00000390277 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
IGKV3D-11-201ENST00000390277 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
IGKV3D-11-201ENST00000390277 UBR1Q8IWV7 1749 aa12.83□□□□□ -0.36
IGKV3D-11-201ENST00000390277 TMEM94Q12767 1356 aa12.82□□□□□ -0.36
IGKV3D-11-201ENST00000390277 FOXD1Q16676 465 aa12.82□□□□□ -0.36
IGKV3D-11-201ENST00000390277 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
IGKV3D-11-201ENST00000390277 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
IGKV3D-11-201ENST00000390277 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
IGKV3D-11-201ENST00000390277 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
IGKV3D-11-201ENST00000390277 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
IGKV3D-11-201ENST00000390277 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
IGKV3D-11-201ENST00000390277 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
IGKV3D-11-201ENST00000390277 SLIT1O75093 1534 aa12.8□□□□□ -0.36
IGKV3D-11-201ENST00000390277 RXRBP28702 533 aa12.8□□□□□ -0.36
IGKV3D-11-201ENST00000390277 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
IGKV3D-11-201ENST00000390277 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
IGKV3D-11-201ENST00000390277 MSH6P52701 1360 aa12.79□□□□□ -0.36
IGKV3D-11-201ENST00000390277 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
IGKV3D-11-201ENST00000390277 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
IGKV3D-11-201ENST00000390277 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
IGKV3D-11-201ENST00000390277 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
IGKV3D-11-201ENST00000390277 ABCC3O15438 1527 aa12.77□□□□□ -0.37
IGKV3D-11-201ENST00000390277 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
IGKV3D-11-201ENST00000390277 LTKP29376 864 aa12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 PRDM15P57071 1507 aaPredicted RBP12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 LRP6O75581 1613 aa12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
IGKV3D-11-201ENST00000390277 KCNA6P17658 529 aa12.75□□□□□ -0.37
IGKV3D-11-201ENST00000390277 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
IGKV3D-11-201ENST00000390277 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
IGKV3D-11-201ENST00000390277 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
IGKV3D-11-201ENST00000390277 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
IGKV3D-11-201ENST00000390277 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
IGKV3D-11-201ENST00000390277 NWD1Q149M9 1564 aa12.72□□□□□ -0.37
IGKV3D-11-201ENST00000390277 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
IGKV3D-11-201ENST00000390277 TSPY4P0CV99 314 aa12.71□□□□□ -0.37
IGKV3D-11-201ENST00000390277 TSPY10P0CW01 314 aa12.71□□□□□ -0.37
IGKV3D-11-201ENST00000390277 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
IGKV3D-11-201ENST00000390277 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
IGKV3D-11-201ENST00000390277 CEP152O94986 1710 aa12.71□□□□□ -0.38
IGKV3D-11-201ENST00000390277 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
IGKV3D-11-201ENST00000390277 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
IGKV3D-11-201ENST00000390277 KDM5AP29375 1690 aaKnown RBP12.69□□□□□ -0.38
IGKV3D-11-201ENST00000390277 PIK3C2BO00750 1634 aa12.69□□□□□ -0.38
IGKV3D-11-201ENST00000390277 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 ARHGEF5Q12774 1597 aa12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
IGKV3D-11-201ENST00000390277 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
IGKV3D-11-201ENST00000390277 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
IGKV3D-11-201ENST00000390277 RGS12O14924 1447 aa12.67□□□□□ -0.38
IGKV3D-11-201ENST00000390277 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
IGKV3D-11-201ENST00000390277 SRCAPQ6ZRS2 3230 aa12.67□□□□□ -0.38
IGKV3D-11-201ENST00000390277 AFF2P51816 1311 aa12.66□□□□□ -0.38
IGKV3D-11-201ENST00000390277 TET3O43151 1660 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms