RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
SCFD2-201ENST00000388940 BCANQ96GW7 911 aa20.55■□□□□ 0.88
SCFD2-201ENST00000388940 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
SCFD2-201ENST00000388940 MAGI2Q86UL8 1455 aa20.53■□□□□ 0.88
SCFD2-201ENST00000388940 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.88
SCFD2-201ENST00000388940 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.88
SCFD2-201ENST00000388940 ERBINQ96RT1 1412 aa20.52■□□□□ 0.88
SCFD2-201ENST00000388940 TRPM1Q7Z4N2 1603 aa20.51■□□□□ 0.87
SCFD2-201ENST00000388940 ZBED9Q6R2W3 1325 aa20.51■□□□□ 0.87
SCFD2-201ENST00000388940 ATP10AO60312 1499 aa20.51■□□□□ 0.87
SCFD2-201ENST00000388940 PLA2R1Q13018 1463 aa20.51■□□□□ 0.87
SCFD2-201ENST00000388940 EFCAB2Q5VUJ9 269 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 ABCC1P33527 1531 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 PRAG1Q86YV5 1406 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 ARAP3Q8WWN8 1544 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
SCFD2-201ENST00000388940 LAMC1P11047 1609 aa20.48■□□□□ 0.87
SCFD2-201ENST00000388940 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
SCFD2-201ENST00000388940 E9PCH4 1651 aa20.46■□□□□ 0.87
SCFD2-201ENST00000388940 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SCFD2-201ENST00000388940 GPRASP1Q5JY77 1395 aa20.45■□□□□ 0.86
SCFD2-201ENST00000388940 A2MP01023 1474 aa20.43■□□□□ 0.86
SCFD2-201ENST00000388940 KTN1Q86UP2 1357 aaKnown RBP20.43■□□□□ 0.86
SCFD2-201ENST00000388940 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
SCFD2-201ENST00000388940 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
SCFD2-201ENST00000388940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
SCFD2-201ENST00000388940 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
SCFD2-201ENST00000388940 TRAPPC8Q9Y2L5 1435 aa20.4■□□□□ 0.86
SCFD2-201ENST00000388940 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
SCFD2-201ENST00000388940 RALBP1Q15311 655 aa20.35■□□□□ 0.85
SCFD2-201ENST00000388940 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
SCFD2-201ENST00000388940 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
SCFD2-201ENST00000388940 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
SCFD2-201ENST00000388940 DEPDC5O75140 1603 aa20.34■□□□□ 0.85
SCFD2-201ENST00000388940 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.85
SCFD2-201ENST00000388940 ABCA9Q8IUA7 1624 aa20.33■□□□□ 0.85
SCFD2-201ENST00000388940 SPAG9O60271 1321 aaKnown RBP20.33■□□□□ 0.85
SCFD2-201ENST00000388940 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.84
SCFD2-201ENST00000388940 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
SCFD2-201ENST00000388940 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
SCFD2-201ENST00000388940 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
SCFD2-201ENST00000388940 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
SCFD2-201ENST00000388940 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
SCFD2-201ENST00000388940 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
SCFD2-201ENST00000388940 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
SCFD2-201ENST00000388940 TMC1Q8TDI8 760 aa20.29■□□□□ 0.84
SCFD2-201ENST00000388940 PPP4R2Q9NY27 417 aa20.29■□□□□ 0.84
SCFD2-201ENST00000388940 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
SCFD2-201ENST00000388940 TRPM2O94759 1503 aa20.29■□□□□ 0.84
SCFD2-201ENST00000388940 CEP152O94986 1710 aa20.28■□□□□ 0.84
SCFD2-201ENST00000388940 PTPRTO14522 1441 aa20.28■□□□□ 0.84
SCFD2-201ENST00000388940 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
SCFD2-201ENST00000388940 TET3O43151 1660 aa20.27■□□□□ 0.84
SCFD2-201ENST00000388940 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
SCFD2-201ENST00000388940 STAC3Q96MF2 364 aa20.27■□□□□ 0.84
SCFD2-201ENST00000388940 TESK2Q96S53 571 aa20.27■□□□□ 0.84
SCFD2-201ENST00000388940 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
SCFD2-201ENST00000388940 VWDEQ8N2E2 1590 aa20.26■□□□□ 0.83
SCFD2-201ENST00000388940 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
SCFD2-201ENST00000388940 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
SCFD2-201ENST00000388940 PARD3Q8TEW0 1356 aa20.26■□□□□ 0.83
SCFD2-201ENST00000388940 FANCAO15360 1455 aa20.25■□□□□ 0.83
SCFD2-201ENST00000388940 MADDQ8WXG6 1647 aa20.25■□□□□ 0.83
SCFD2-201ENST00000388940 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
SCFD2-201ENST00000388940 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
SCFD2-201ENST00000388940 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
SCFD2-201ENST00000388940 NEURL4Q96JN8 1562 aa20.23■□□□□ 0.83
SCFD2-201ENST00000388940 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
SCFD2-201ENST00000388940 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
SCFD2-201ENST00000388940 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
SCFD2-201ENST00000388940 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
SCFD2-201ENST00000388940 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
SCFD2-201ENST00000388940 TMF1P82094 1093 aa20.2■□□□□ 0.82
SCFD2-201ENST00000388940 NLRP13Q86W25 1043 aa20.2■□□□□ 0.82
SCFD2-201ENST00000388940 KANK1Q14678 1352 aa20.19■□□□□ 0.82
SCFD2-201ENST00000388940 ADGRL1O94910 1474 aa20.19■□□□□ 0.82
SCFD2-201ENST00000388940 SCAPERQ9BY12 1400 aa20.18■□□□□ 0.82
SCFD2-201ENST00000388940 ASXL2Q76L83 1435 aa20.17■□□□□ 0.82
SCFD2-201ENST00000388940 KIAA1210Q9ULL0 1709 aa20.17■□□□□ 0.82
SCFD2-201ENST00000388940 INSRP06213 1382 aa20.16■□□□□ 0.82
SCFD2-201ENST00000388940 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
SCFD2-201ENST00000388940 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
SCFD2-201ENST00000388940 SCAF11Q99590 1463 aaKnown RBP20.12■□□□□ 0.81
SCFD2-201ENST00000388940 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
SCFD2-201ENST00000388940 PANK3Q9H999 370 aa20.12■□□□□ 0.81
SCFD2-201ENST00000388940 KIF3BO15066 747 aa20.1■□□□□ 0.81
SCFD2-201ENST00000388940 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
SCFD2-201ENST00000388940 KIF1BO60333 1816 aa20.08■□□□□ 0.81
SCFD2-201ENST00000388940 CDCA8Q53HL2 280 aa20.08■□□□□ 0.8
SCFD2-201ENST00000388940 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.8
SCFD2-201ENST00000388940 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
SCFD2-201ENST00000388940 CFAP74Q9C0B2 1584 aa20.07■□□□□ 0.8
SCFD2-201ENST00000388940 MYOM2P54296 1465 aa20.07■□□□□ 0.8
SCFD2-201ENST00000388940 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
SCFD2-201ENST00000388940 SYNMO15061 1565 aa20.07■□□□□ 0.8
SCFD2-201ENST00000388940 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
SCFD2-201ENST00000388940 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
SCFD2-201ENST00000388940 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
SCFD2-201ENST00000388940 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms