RNA–Protein interactions for RNA: ENST00000384782.1

RNU1-3-201, Transcript of RNA, U1 small nuclear 3, humanhuman

BASIC

Gene RNU1-3, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-3-201ENST00000384782 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
RNU1-3-201ENST00000384782 PZPP20742 1482 aa12.89□□□□□ -0.35
RNU1-3-201ENST00000384782 ATP10AO60312 1499 aa12.88□□□□□ -0.35
RNU1-3-201ENST00000384782 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
RNU1-3-201ENST00000384782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
RNU1-3-201ENST00000384782 PKD2Q13563 968 aa12.86□□□□□ -0.35
RNU1-3-201ENST00000384782 ABCA6Q8N139 1617 aa12.86□□□□□ -0.35
RNU1-3-201ENST00000384782 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
RNU1-3-201ENST00000384782 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
RNU1-3-201ENST00000384782 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
RNU1-3-201ENST00000384782 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
RNU1-3-201ENST00000384782 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
RNU1-3-201ENST00000384782 IQGAP3Q86VI3 1631 aa12.85□□□□□ -0.35
RNU1-3-201ENST00000384782 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
RNU1-3-201ENST00000384782 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
RNU1-3-201ENST00000384782 PRDM15P57071 1507 aaPredicted RBP12.83□□□□□ -0.35
RNU1-3-201ENST00000384782 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.36
RNU1-3-201ENST00000384782 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
RNU1-3-201ENST00000384782 AGLP35573 1532 aa12.83□□□□□ -0.36
RNU1-3-201ENST00000384782 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
RNU1-3-201ENST00000384782 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
RNU1-3-201ENST00000384782 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
RNU1-3-201ENST00000384782 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
RNU1-3-201ENST00000384782 GGT6Q6P531 493 aa12.8□□□□□ -0.36
RNU1-3-201ENST00000384782 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
RNU1-3-201ENST00000384782 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
RNU1-3-201ENST00000384782 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
RNU1-3-201ENST00000384782 FOXD1Q16676 465 aa12.78□□□□□ -0.36
RNU1-3-201ENST00000384782 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
RNU1-3-201ENST00000384782 TET3O43151 1660 aa12.77□□□□□ -0.36
RNU1-3-201ENST00000384782 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
RNU1-3-201ENST00000384782 ZC3H13Q5T200 1668 aaKnown RBP12.74□□□□□ -0.37
RNU1-3-201ENST00000384782 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
RNU1-3-201ENST00000384782 ABCC3O15438 1527 aa12.73□□□□□ -0.37
RNU1-3-201ENST00000384782 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
RNU1-3-201ENST00000384782 PTPRTO14522 1441 aa12.73□□□□□ -0.37
RNU1-3-201ENST00000384782 ARHGAP31Q2M1Z3 1444 aa12.73□□□□□ -0.37
RNU1-3-201ENST00000384782 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
RNU1-3-201ENST00000384782 ARID4BQ4LE39 1312 aaPredicted RBP12.72□□□□□ -0.37
RNU1-3-201ENST00000384782 E9PCH4 1651 aa12.71□□□□□ -0.37
RNU1-3-201ENST00000384782 PPP1R15AO75807 674 aaPredicted RBP12.71□□□□□ -0.37
RNU1-3-201ENST00000384782 TRPM2O94759 1503 aa12.7□□□□□ -0.38
RNU1-3-201ENST00000384782 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
RNU1-3-201ENST00000384782 NPATQ14207 1427 aa12.69□□□□□ -0.38
RNU1-3-201ENST00000384782 CNTLNQ9NXG0 1405 aa12.69□□□□□ -0.38
RNU1-3-201ENST00000384782 CEP152O94986 1710 aa12.68□□□□□ -0.38
RNU1-3-201ENST00000384782 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
RNU1-3-201ENST00000384782 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
RNU1-3-201ENST00000384782 L3MBTL2Q969R5 705 aa12.67□□□□□ -0.38
RNU1-3-201ENST00000384782 SPHKAPQ2M3C7 1700 aa12.67□□□□□ -0.38
RNU1-3-201ENST00000384782 MLECQ14165 292 aa12.66□□□□□ -0.38
RNU1-3-201ENST00000384782 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
RNU1-3-201ENST00000384782 NOS1P29475 1434 aa12.65□□□□□ -0.38
RNU1-3-201ENST00000384782 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
RNU1-3-201ENST00000384782 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
RNU1-3-201ENST00000384782 ZMYM3Q14202 1370 aa12.62□□□□□ -0.39
RNU1-3-201ENST00000384782 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
RNU1-3-201ENST00000384782 CLTCQ00610 1675 aaKnown RBP12.61□□□□□ -0.39
RNU1-3-201ENST00000384782 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
RNU1-3-201ENST00000384782 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
RNU1-3-201ENST00000384782 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
RNU1-3-201ENST00000384782 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
RNU1-3-201ENST00000384782 RPGRIP1LQ68CZ1 1315 aa12.6□□□□□ -0.39
RNU1-3-201ENST00000384782 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
RNU1-3-201ENST00000384782 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
RNU1-3-201ENST00000384782 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.4
RNU1-3-201ENST00000384782 SPATA31D1Q6ZQQ2 1576 aa12.57□□□□□ -0.4
RNU1-3-201ENST00000384782 PIK3C2BO00750 1634 aa12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 KIF1BO60333 1816 aa12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 IDI1Q13907 227 aa12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 SYNMO15061 1565 aa12.56□□□□□ -0.4
RNU1-3-201ENST00000384782 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
RNU1-3-201ENST00000384782 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
RNU1-3-201ENST00000384782 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
RNU1-3-201ENST00000384782 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
RNU1-3-201ENST00000384782 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
RNU1-3-201ENST00000384782 TNRQ92752 1358 aa12.54□□□□□ -0.4
RNU1-3-201ENST00000384782 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
RNU1-3-201ENST00000384782 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
RNU1-3-201ENST00000384782 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
RNU1-3-201ENST00000384782 MYOM2P54296 1465 aa12.53□□□□□ -0.4
RNU1-3-201ENST00000384782 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
RNU1-3-201ENST00000384782 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
RNU1-3-201ENST00000384782 RALGAPBQ86X10 1494 aa12.52□□□□□ -0.41
RNU1-3-201ENST00000384782 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
RNU1-3-201ENST00000384782 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
RNU1-3-201ENST00000384782 CFAP65Q6ZU64 1925 aaKnown RBP12.49□□□□□ -0.41
RNU1-3-201ENST00000384782 ADAMTSL3P82987 1691 aa12.49□□□□□ -0.41
RNU1-3-201ENST00000384782 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
RNU1-3-201ENST00000384782 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
RNU1-3-201ENST00000384782 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
RNU1-3-201ENST00000384782 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNU1-3-201ENST00000384782 C3P01024 1663 aa12.48□□□□□ -0.41
RNU1-3-201ENST00000384782 KDM5AP29375 1690 aaKnown RBP12.48□□□□□ -0.41
RNU1-3-201ENST00000384782 NRXN1Q9ULB1 1477 aa12.47□□□□□ -0.41
RNU1-3-201ENST00000384782 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
RNU1-3-201ENST00000384782 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms