RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 KDM5DQ9BY66 1539 aa28.47■■■□□ 2.15
RPUSD3-201ENST00000383820 LRRC9Q6ZRR7 1453 aa28.45■■■□□ 2.14
RPUSD3-201ENST00000383820 TSPY4P0CV99 314 aa28.44■■■□□ 2.14
RPUSD3-201ENST00000383820 TSPY10P0CW01 314 aa28.44■■■□□ 2.14
RPUSD3-201ENST00000383820 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
RPUSD3-201ENST00000383820 PZPP20742 1482 aa28.43■■■□□ 2.14
RPUSD3-201ENST00000383820 MAP3K1Q13233 1512 aa28.41■■■□□ 2.14
RPUSD3-201ENST00000383820 ZNF335Q9H4Z2 1342 aaPredicted RBP28.41■■■□□ 2.14
RPUSD3-201ENST00000383820 TNRQ92752 1358 aa28.4■■■□□ 2.14
RPUSD3-201ENST00000383820 WASHC2CQ9Y4E1 1318 aa28.4■■■□□ 2.14
RPUSD3-201ENST00000383820 MAST1Q9Y2H9 1570 aa28.37■■■□□ 2.13
RPUSD3-201ENST00000383820 FBXO31Q5XUX0 539 aaPredicted RBP28.36■■■□□ 2.13
RPUSD3-201ENST00000383820 LOC105371045A0A1W2PR82 267 aa28.34■■■□□ 2.13
RPUSD3-201ENST00000383820 MIA2Q96PC5 1412 aa28.33■■■□□ 2.13
RPUSD3-201ENST00000383820 RNF17Q9BXT8 1623 aaKnown RBP28.32■■■□□ 2.12
RPUSD3-201ENST00000383820 POLR1AO95602 1720 aaPredicted RBP28.32■■■□□ 2.12
RPUSD3-201ENST00000383820 DISP3Q9P2K9 1392 aa28.32■■■□□ 2.12
RPUSD3-201ENST00000383820 NLRP1Q9C000 1473 aa28.31■■■□□ 2.12
RPUSD3-201ENST00000383820 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
RPUSD3-201ENST00000383820 EIF2AK4Q9P2K8 1649 aaKnown RBP28.29■■■□□ 2.12
RPUSD3-201ENST00000383820 ZC3H13Q5T200 1668 aaKnown RBP28.29■■■□□ 2.12
RPUSD3-201ENST00000383820 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
RPUSD3-201ENST00000383820 NEURL4Q96JN8 1562 aa28.28■■■□□ 2.12
RPUSD3-201ENST00000383820 THEMISQ8N1K5 641 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-201ENST00000383820 UBAP1LF5GYI3 381 aa28.26■■■□□ 2.11
RPUSD3-201ENST00000383820 UGGT1Q9NYU2 1555 aa28.24■■■□□ 2.11
RPUSD3-201ENST00000383820 ABCC3O15438 1527 aa28.24■■■□□ 2.11
RPUSD3-201ENST00000383820 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
RPUSD3-201ENST00000383820 SPATA31D1Q6ZQQ2 1576 aa28.23■■■□□ 2.11
RPUSD3-201ENST00000383820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.23■■■□□ 2.11
RPUSD3-201ENST00000383820 CPS1P31327 1500 aa28.22■■■□□ 2.11
RPUSD3-201ENST00000383820 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
RPUSD3-201ENST00000383820 MED14O60244 1454 aa28.2■■■□□ 2.1
RPUSD3-201ENST00000383820 DUOX2Q9NRD8 1548 aa28.19■■■□□ 2.1
RPUSD3-201ENST00000383820 MROH1Q8NDA8 1641 aa28.19■■■□□ 2.1
RPUSD3-201ENST00000383820 SHANK2Q9UPX8 1470 aa28.19■■■□□ 2.1
RPUSD3-201ENST00000383820 ILDR2Q71H61 639 aa28.16■■■□□ 2.1
RPUSD3-201ENST00000383820 ERVK-7P63135 1459 aa28.15■■■□□ 2.1
RPUSD3-201ENST00000383820 NPHP4O75161 1426 aaPredicted RBP28.15■■■□□ 2.1
RPUSD3-201ENST00000383820 VWDEQ8N2E2 1590 aa28.12■■■□□ 2.09
RPUSD3-201ENST00000383820 CROCC2H7BZ55 1655 aa28.12■■■□□ 2.09
RPUSD3-201ENST00000383820 CEP152O94986 1710 aa28.12■■■□□ 2.09
RPUSD3-201ENST00000383820 APLP2Q06481 763 aa28.11■■■□□ 2.09
RPUSD3-201ENST00000383820 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
RPUSD3-201ENST00000383820 KIF15Q9NS87 1388 aa28.1■■■□□ 2.09
RPUSD3-201ENST00000383820 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
RPUSD3-201ENST00000383820 ABCC5O15440 1437 aa28.09■■■□□ 2.09
RPUSD3-201ENST00000383820 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
RPUSD3-201ENST00000383820 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.09
RPUSD3-201ENST00000383820 TOM1O60784 492 aa28.08■■■□□ 2.09
RPUSD3-201ENST00000383820 ARHGAP31Q2M1Z3 1444 aa28.08■■■□□ 2.09
RPUSD3-201ENST00000383820 SOCS7O14512 581 aa28.07■■■□□ 2.08
RPUSD3-201ENST00000383820 UBR1Q8IWV7 1749 aa28.04■■■□□ 2.08
RPUSD3-201ENST00000383820 DAPK1P53355 1430 aa28.03■■■□□ 2.08
RPUSD3-201ENST00000383820 FGD6Q6ZV73 1430 aa28.02■■■□□ 2.08
RPUSD3-201ENST00000383820 RRP7BPQ9NSQ0 103 aa28.02■■■□□ 2.08
RPUSD3-201ENST00000383820 CFAP65Q6ZU64 1925 aaKnown RBP28.02■■■□□ 2.08
RPUSD3-201ENST00000383820 SCAF1Q9H7N4 1312 aaKnown RBP27.98■■■□□ 2.07
RPUSD3-201ENST00000383820 PIP4K2BP78356 416 aa27.98■■■□□ 2.07
RPUSD3-201ENST00000383820 SLIT1O75093 1534 aa27.97■■■□□ 2.07
RPUSD3-201ENST00000383820 SCAF11Q99590 1463 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-201ENST00000383820 ARHGAP23Q9P227 1491 aa27.97■■■□□ 2.07
RPUSD3-201ENST00000383820 KANK1Q14678 1352 aa27.97■■■□□ 2.07
RPUSD3-201ENST00000383820 HSPA1LP34931 641 aa27.96■■■□□ 2.07
RPUSD3-201ENST00000383820 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
RPUSD3-201ENST00000383820 SYNMO15061 1565 aa27.95■■■□□ 2.07
RPUSD3-201ENST00000383820 STRCP1A6NGW2 1772 aa27.94■■■□□ 2.06
RPUSD3-201ENST00000383820 LRRC7Q96NW7 1537 aa27.93■■■□□ 2.06
RPUSD3-201ENST00000383820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.93■■■□□ 2.06
RPUSD3-201ENST00000383820 LMTK2Q8IWU2 1503 aa27.92■■■□□ 2.06
RPUSD3-201ENST00000383820 ALKQ9UM73 1620 aa27.92■■■□□ 2.06
RPUSD3-201ENST00000383820 TXNDC2Q86VQ3 553 aa27.9■■■□□ 2.06
RPUSD3-201ENST00000383820 KDM5AP29375 1690 aaKnown RBP27.89■■■□□ 2.06
RPUSD3-201ENST00000383820 LTKP29376 864 aa27.89■■■□□ 2.06
RPUSD3-201ENST00000383820 PIK3C2BO00750 1634 aa27.89■■■□□ 2.05
RPUSD3-201ENST00000383820 EID1Q9Y6B2 187 aa27.88■■■□□ 2.05
RPUSD3-201ENST00000383820 CHIC2Q9UKJ5 165 aa27.87■■■□□ 2.05
RPUSD3-201ENST00000383820 ADGRL2O95490 1459 aa27.86■■■□□ 2.05
RPUSD3-201ENST00000383820 TMEM2Q9UHN6 1383 aa27.86■■■□□ 2.05
RPUSD3-201ENST00000383820 MED1Q15648 1581 aaPredicted RBP27.84■■■□□ 2.05
RPUSD3-201ENST00000383820 STAG3Q9UJ98 1225 aa27.82■■■□□ 2.04
RPUSD3-201ENST00000383820 EFCAB6Q5THR3 1501 aa27.82■■■□□ 2.04
RPUSD3-201ENST00000383820 IDI1Q13907 227 aa27.8■■■□□ 2.04
RPUSD3-201ENST00000383820 NOS1P29475 1434 aa27.8■■■□□ 2.04
RPUSD3-201ENST00000383820 SLC52A1Q9NWF4 448 aa27.74■■■□□ 2.03
RPUSD3-201ENST00000383820 RPRD2Q5VT52 1461 aaKnown RBP27.74■■■□□ 2.03
RPUSD3-201ENST00000383820 ANKRD50Q9ULJ7 1429 aa27.74■■■□□ 2.03
RPUSD3-201ENST00000383820 XIRP1Q702N8 1843 aaKnown RBP27.74■■■□□ 2.03
RPUSD3-201ENST00000383820 ADGRB3O60242 1522 aa27.73■■■□□ 2.03
RPUSD3-201ENST00000383820 FAM50AQ14320 339 aaKnown RBP27.73■■■□□ 2.03
RPUSD3-201ENST00000383820 TET3O43151 1660 aa27.71■■■□□ 2.03
RPUSD3-201ENST00000383820 KCNA6P17658 529 aa27.67■■■□□ 2.02
RPUSD3-201ENST00000383820 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
RPUSD3-201ENST00000383820 TMEM94Q12767 1356 aa27.63■■■□□ 2.01
RPUSD3-201ENST00000383820 FAM135BQ49AJ0 1406 aa27.62■■■□□ 2.01
RPUSD3-201ENST00000383820 SLC26A8Q96RN1 970 aa27.62■■■□□ 2.01
RPUSD3-201ENST00000383820 GCC2Q8IWJ2 1684 aa27.62■■■□□ 2.01
RPUSD3-201ENST00000383820 UNC13BO14795 1591 aa27.61■■■□□ 2.01
RPUSD3-201ENST00000383820 NKTRP30414 1462 aaKnown RBP27.61■■■□□ 2.01
RPUSD3-201ENST00000383820 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms