RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
DNMT3A-203ENST00000380746 RAPGEF6Q8TEU7 1601 aa14.57□□□□□ -0.08
DNMT3A-203ENST00000380746 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
DNMT3A-203ENST00000380746 KIF14Q15058 1648 aa14.56□□□□□ -0.08
DNMT3A-203ENST00000380746 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
DNMT3A-203ENST00000380746 KTN1Q86UP2 1357 aaKnown RBP14.55□□□□□ -0.08
DNMT3A-203ENST00000380746 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
DNMT3A-203ENST00000380746 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
DNMT3A-203ENST00000380746 CANXP27824 592 aaKnown RBP14.53□□□□□ -0.08
DNMT3A-203ENST00000380746 PZPP20742 1482 aa14.53□□□□□ -0.08
DNMT3A-203ENST00000380746 STK26Q9P289 416 aa14.53□□□□□ -0.08
DNMT3A-203ENST00000380746 TRAK1Q9UPV9 953 aa14.53□□□□□ -0.08
DNMT3A-203ENST00000380746 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
DNMT3A-203ENST00000380746 NLRP13Q86W25 1043 aa14.52□□□□□ -0.08
DNMT3A-203ENST00000380746 ANP32AP39687 249 aaKnown RBP14.52□□□□□ -0.09
DNMT3A-203ENST00000380746 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
DNMT3A-203ENST00000380746 MSH5O43196 834 aa14.5□□□□□ -0.09
DNMT3A-203ENST00000380746 CFAP70Q5T0N1 1121 aa14.5□□□□□ -0.09
DNMT3A-203ENST00000380746 RALBP1Q15311 655 aa14.5□□□□□ -0.09
DNMT3A-203ENST00000380746 TMEM132EQ6IEE7 984 aa14.49□□□□□ -0.09
DNMT3A-203ENST00000380746 PLEKHH2Q8IVE3 1493 aa14.49□□□□□ -0.09
DNMT3A-203ENST00000380746 MLECQ14165 292 aa14.49□□□□□ -0.09
DNMT3A-203ENST00000380746 RSPH4AQ5TD94 716 aa14.48□□□□□ -0.09
DNMT3A-203ENST00000380746 RRP7AQ9Y3A4 280 aaKnown RBP14.48□□□□□ -0.09
DNMT3A-203ENST00000380746 RGS3P49796 1198 aa14.48□□□□□ -0.09
DNMT3A-203ENST00000380746 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
DNMT3A-203ENST00000380746 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
DNMT3A-203ENST00000380746 TEX14Q8IWB6 1497 aa14.47□□□□□ -0.09
DNMT3A-203ENST00000380746 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
DNMT3A-203ENST00000380746 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
DNMT3A-203ENST00000380746 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
DNMT3A-203ENST00000380746 PPM1GO15355 546 aaPredicted RBP14.45□□□□□ -0.1
DNMT3A-203ENST00000380746 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
DNMT3A-203ENST00000380746 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
DNMT3A-203ENST00000380746 DNMT1P26358 1616 aaKnown RBP14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 SCAPERQ9BY12 1400 aa14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 RRP1P56182 461 aaKnown RBP14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 DHX29Q7Z478 1369 aaKnown RBP14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
DNMT3A-203ENST00000380746 CRBNQ96SW2 442 aa14.42□□□□□ -0.1
DNMT3A-203ENST00000380746 APAF1O14727 1248 aa14.41□□□□□ -0.1
DNMT3A-203ENST00000380746 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
DNMT3A-203ENST00000380746 BCL2L13Q9BXK5 485 aa14.4□□□□□ -0.1
DNMT3A-203ENST00000380746 RAPGEF3O95398 923 aa14.4□□□□□ -0.1
DNMT3A-203ENST00000380746 SPATA31E1Q6ZUB1 1445 aa14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 SYCP2Q9BX26 1530 aa14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 NUP160Q12769 1436 aa14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 WASHC2CQ9Y4E1 1318 aa14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 KANK1Q14678 1352 aa14.39□□□□□ -0.11
DNMT3A-203ENST00000380746 C20orf194Q5TEA3 1177 aa14.38□□□□□ -0.11
DNMT3A-203ENST00000380746 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
DNMT3A-203ENST00000380746 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
DNMT3A-203ENST00000380746 MORC1Q86VD1 984 aa14.37□□□□□ -0.11
DNMT3A-203ENST00000380746 NOP58Q9Y2X3 529 aaKnown RBP14.37□□□□□ -0.11
DNMT3A-203ENST00000380746 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
DNMT3A-203ENST00000380746 SLC4A3P48751 1232 aa14.37□□□□□ -0.11
DNMT3A-203ENST00000380746 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
DNMT3A-203ENST00000380746 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
DNMT3A-203ENST00000380746 CLUAP1Q96AJ1 413 aa14.36□□□□□ -0.11
DNMT3A-203ENST00000380746 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
DNMT3A-203ENST00000380746 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
DNMT3A-203ENST00000380746 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
DNMT3A-203ENST00000380746 TESK2Q96S53 571 aa14.35□□□□□ -0.11
DNMT3A-203ENST00000380746 ADGRF5Q8IZF2 1346 aa14.35□□□□□ -0.11
DNMT3A-203ENST00000380746 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.11
DNMT3A-203ENST00000380746 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-203ENST00000380746 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
DNMT3A-203ENST00000380746 GOLGA2Q08379 1002 aa14.32□□□□□ -0.12
DNMT3A-203ENST00000380746 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
DNMT3A-203ENST00000380746 SOX12O15370 315 aa14.32□□□□□ -0.12
DNMT3A-203ENST00000380746 POGKQ9P215 609 aa14.32□□□□□ -0.12
DNMT3A-203ENST00000380746 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
DNMT3A-203ENST00000380746 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-203ENST00000380746 ARID4BQ4LE39 1312 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-203ENST00000380746 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
DNMT3A-203ENST00000380746 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 ABCC10Q5T3U5 1492 aa14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 MBD5Q9P267 1494 aa14.3□□□□□ -0.12
DNMT3A-203ENST00000380746 BCAR3O75815 825 aa14.29□□□□□ -0.12
DNMT3A-203ENST00000380746 MINK1Q8N4C8 1332 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-203ENST00000380746 PRAG1Q86YV5 1406 aa14.28□□□□□ -0.12
DNMT3A-203ENST00000380746 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-203ENST00000380746 PDE4AP27815 886 aa14.28□□□□□ -0.12
DNMT3A-203ENST00000380746 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.12
DNMT3A-203ENST00000380746 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
DNMT3A-203ENST00000380746 ARXQ96QS3 562 aa14.27□□□□□ -0.12
DNMT3A-203ENST00000380746 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
DNMT3A-203ENST00000380746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
DNMT3A-203ENST00000380746 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
DNMT3A-203ENST00000380746 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
DNMT3A-203ENST00000380746 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
DNMT3A-203ENST00000380746 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
DNMT3A-203ENST00000380746 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
DNMT3A-203ENST00000380746 A2MP01023 1474 aa14.25□□□□□ -0.13
DNMT3A-203ENST00000380746 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms