RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
PMS2-202ENST00000380416 CCDC18Q5T9S5 1454 aa14.09□□□□□ -0.15
PMS2-202ENST00000380416 VWDEQ8N2E2 1590 aa14.09□□□□□ -0.15
PMS2-202ENST00000380416 KIF14Q15058 1648 aa14.08□□□□□ -0.15
PMS2-202ENST00000380416 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.15
PMS2-202ENST00000380416 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
PMS2-202ENST00000380416 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
PMS2-202ENST00000380416 POTEAQ6S8J7 498 aa14.07□□□□□ -0.16
PMS2-202ENST00000380416 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
PMS2-202ENST00000380416 DNMT1P26358 1616 aaKnown RBP14.06□□□□□ -0.16
PMS2-202ENST00000380416 RNF17Q9BXT8 1623 aaKnown RBP14.06□□□□□ -0.16
PMS2-202ENST00000380416 TROQ12816 1431 aaPredicted RBP14.06□□□□□ -0.16
PMS2-202ENST00000380416 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
PMS2-202ENST00000380416 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
PMS2-202ENST00000380416 A2ML1A8K2U0 1454 aa14.03□□□□□ -0.16
PMS2-202ENST00000380416 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.16
PMS2-202ENST00000380416 SRCAPQ6ZRS2 3230 aa14.02□□□□□ -0.17
PMS2-202ENST00000380416 SYNMO15061 1565 aa14.01□□□□□ -0.17
PMS2-202ENST00000380416 ABCC1P33527 1531 aa14.01□□□□□ -0.17
PMS2-202ENST00000380416 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
PMS2-202ENST00000380416 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
PMS2-202ENST00000380416 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
PMS2-202ENST00000380416 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
PMS2-202ENST00000380416 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
PMS2-202ENST00000380416 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
PMS2-202ENST00000380416 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
PMS2-202ENST00000380416 PLXNC1O60486 1568 aa13.96□□□□□ -0.18
PMS2-202ENST00000380416 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
PMS2-202ENST00000380416 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
PMS2-202ENST00000380416 MED14O60244 1454 aa13.94□□□□□ -0.18
PMS2-202ENST00000380416 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.18
PMS2-202ENST00000380416 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
PMS2-202ENST00000380416 IQGAP1P46940 1657 aa13.93□□□□□ -0.18
PMS2-202ENST00000380416 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
PMS2-202ENST00000380416 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
PMS2-202ENST00000380416 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
PMS2-202ENST00000380416 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
PMS2-202ENST00000380416 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.19
PMS2-202ENST00000380416 XIRP1Q702N8 1843 aaKnown RBP13.89□□□□□ -0.19
PMS2-202ENST00000380416 ANKLE2Q86XL3 938 aa13.86□□□□□ -0.19
PMS2-202ENST00000380416 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
PMS2-202ENST00000380416 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
PMS2-202ENST00000380416 INO80Q9ULG1 1556 aaPredicted RBP13.86□□□□□ -0.19
PMS2-202ENST00000380416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
PMS2-202ENST00000380416 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
PMS2-202ENST00000380416 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
PMS2-202ENST00000380416 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
PMS2-202ENST00000380416 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
PMS2-202ENST00000380416 A2MP01023 1474 aa13.84□□□□□ -0.19
PMS2-202ENST00000380416 TNRQ92752 1358 aa13.83□□□□□ -0.19
PMS2-202ENST00000380416 TIAM1Q13009 1591 aa13.83□□□□□ -0.19
PMS2-202ENST00000380416 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
PMS2-202ENST00000380416 SYCP2Q9BX26 1530 aa13.82□□□□□ -0.2
PMS2-202ENST00000380416 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
PMS2-202ENST00000380416 UGGT1Q9NYU2 1555 aa13.82□□□□□ -0.2
PMS2-202ENST00000380416 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
PMS2-202ENST00000380416 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
PMS2-202ENST00000380416 PZPP20742 1482 aa13.8□□□□□ -0.2
PMS2-202ENST00000380416 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
PMS2-202ENST00000380416 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
PMS2-202ENST00000380416 ADGBQ8N7X0 1667 aa13.79□□□□□ -0.2
PMS2-202ENST00000380416 GGT6Q6P531 493 aa13.79□□□□□ -0.2
PMS2-202ENST00000380416 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
PMS2-202ENST00000380416 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
PMS2-202ENST00000380416 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
PMS2-202ENST00000380416 ABCB7O75027 752 aa13.77□□□□□ -0.21
PMS2-202ENST00000380416 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
PMS2-202ENST00000380416 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
PMS2-202ENST00000380416 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
PMS2-202ENST00000380416 LRRC9Q6ZRR7 1453 aa13.75□□□□□ -0.21
PMS2-202ENST00000380416 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
PMS2-202ENST00000380416 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
PMS2-202ENST00000380416 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
PMS2-202ENST00000380416 LRP6O75581 1613 aa13.74□□□□□ -0.21
PMS2-202ENST00000380416 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
PMS2-202ENST00000380416 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
PMS2-202ENST00000380416 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
PMS2-202ENST00000380416 JCADQ9P266 1359 aa13.72□□□□□ -0.21
PMS2-202ENST00000380416 APLP2Q06481 763 aa13.72□□□□□ -0.21
PMS2-202ENST00000380416 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.21
PMS2-202ENST00000380416 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
PMS2-202ENST00000380416 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
PMS2-202ENST00000380416 COL16A1Q07092 1604 aaPredicted RBP13.7□□□□□ -0.22
PMS2-202ENST00000380416 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
PMS2-202ENST00000380416 CCDC141Q6ZP82 1450 aa13.68□□□□□ -0.22
PMS2-202ENST00000380416 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
PMS2-202ENST00000380416 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
PMS2-202ENST00000380416 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
PMS2-202ENST00000380416 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
PMS2-202ENST00000380416 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
PMS2-202ENST00000380416 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
PMS2-202ENST00000380416 RXRBP28702 533 aa13.65□□□□□ -0.22
PMS2-202ENST00000380416 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
PMS2-202ENST00000380416 SHPRHQ149N8 1683 aa13.65□□□□□ -0.22
PMS2-202ENST00000380416 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
PMS2-202ENST00000380416 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
PMS2-202ENST00000380416 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
PMS2-202ENST00000380416 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
PMS2-202ENST00000380416 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
PMS2-202ENST00000380416 RSPH4AQ5TD94 716 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms