RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 UQCRHLA0A096LP55 91 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 UQCRHP07919 91 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 HSP90B2PQ58FF3 399 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
CCDC85C-201ENST00000380243 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
CCDC85C-201ENST00000380243 AK7Q96M32 723 aa12.85□□□□□ -0.35
CCDC85C-201ENST00000380243 MSH5O43196 834 aa12.85□□□□□ -0.35
CCDC85C-201ENST00000380243 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
CCDC85C-201ENST00000380243 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
CCDC85C-201ENST00000380243 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
CCDC85C-201ENST00000380243 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
CCDC85C-201ENST00000380243 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 TRIM6-TRIM34B2RNG4 842 aa12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 REC8O95072 547 aa12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
CCDC85C-201ENST00000380243 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
CCDC85C-201ENST00000380243 FOXD4L6Q3SYB3 417 aaPredicted RBP12.82□□□□□ -0.36
CCDC85C-201ENST00000380243 FOXD4L3Q6VB84 417 aaPredicted RBP12.82□□□□□ -0.36
CCDC85C-201ENST00000380243 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
CCDC85C-201ENST00000380243 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
CCDC85C-201ENST00000380243 MYBBP1AQ9BQG0 1328 aaKnown RBP12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 PDCL3Q9H2J4 239 aa12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
CCDC85C-201ENST00000380243 TPM1P09493 284 aa12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 DEF6Q9H4E7 631 aa12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
CCDC85C-201ENST00000380243 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 E9PSI1 815 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 H3BQV1 296 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 AAMPQ13685 434 aa12.79□□□□□ -0.36
CCDC85C-201ENST00000380243 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 BACH2Q9BYV9 841 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 H0YHG0 523 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 MBD3O95983 291 aa12.78□□□□□ -0.36
CCDC85C-201ENST00000380243 FOXD1Q16676 465 aa12.77□□□□□ -0.36
CCDC85C-201ENST00000380243 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.36
CCDC85C-201ENST00000380243 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
CCDC85C-201ENST00000380243 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
CCDC85C-201ENST00000380243 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
CCDC85C-201ENST00000380243 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
CCDC85C-201ENST00000380243 TPD52L1Q16890 204 aaPredicted RBP12.76□□□□□ -0.37
CCDC85C-201ENST00000380243 POGKQ9P215 609 aa12.76□□□□□ -0.37
CCDC85C-201ENST00000380243 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
CCDC85C-201ENST00000380243 CCP110O43303 1012 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 CHMP3Q9Y3E7 222 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 ERCC4Q92889 916 aaPredicted RBP12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
CCDC85C-201ENST00000380243 A0A0G2JS52 829 aa12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 RTF1Q92541 710 aaKnown RBP12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
CCDC85C-201ENST00000380243 PKD2Q13563 968 aa12.73□□□□□ -0.37
CCDC85C-201ENST00000380243 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.379e-6■■■■■ 50.1
CCDC85C-201ENST00000380243 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
CCDC85C-201ENST00000380243 PRDM10Q9NQV6 1147 aa12.73□□□□□ -0.37
CCDC85C-201ENST00000380243 NAT10Q9H0A0 1025 aaKnown RBP12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 MCM4P33991 863 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 IPO7O95373 1038 aaKnown RBP12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 CDR1P51861 262 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 PES1O00541 588 aaKnown RBP12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
CCDC85C-201ENST00000380243 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
CCDC85C-201ENST00000380243 USP8P40818 1118 aa12.71□□□□□ -0.37
CCDC85C-201ENST00000380243 HDAC5Q9UQL6 1122 aa12.71□□□□□ -0.38
CCDC85C-201ENST00000380243 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
CCDC85C-201ENST00000380243 CALCOCO1Q9P1Z2 691 aa12.7□□□□□ -0.38
CCDC85C-201ENST00000380243 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
CCDC85C-201ENST00000380243 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-201ENST00000380243 NPHP1O15259 732 aa12.7□□□□□ -0.38
CCDC85C-201ENST00000380243 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms