RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 MBD5Q9P267 1494 aa10.48□□□□□ -0.73
GPCPD1-201ENST00000379019 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
GPCPD1-201ENST00000379019 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
GPCPD1-201ENST00000379019 ARID3CA6NKF2 412 aa10.47□□□□□ -0.73
GPCPD1-201ENST00000379019 NPATQ14207 1427 aa10.46□□□□□ -0.73
GPCPD1-201ENST00000379019 FER1L4A9Z1Z3 1794 aa10.46□□□□□ -0.73
GPCPD1-201ENST00000379019 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.74
GPCPD1-201ENST00000379019 A2MP01023 1474 aa10.45□□□□□ -0.74
GPCPD1-201ENST00000379019 TRAPPC8Q9Y2L5 1435 aa10.45□□□□□ -0.74
GPCPD1-201ENST00000379019 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
GPCPD1-201ENST00000379019 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 DNMT1P26358 1616 aaKnown RBP10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 DUOX2Q9NRD8 1548 aa10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 PTPRMP28827 1452 aa10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 PTPN23Q9H3S7 1636 aa10.44□□□□□ -0.74
GPCPD1-201ENST00000379019 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 FAM50AQ14320 339 aaKnown RBP10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 MADDQ8WXG6 1647 aa10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 ERBINQ96RT1 1412 aa10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 RAPGEF3O95398 923 aa10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 YEATS2Q9ULM3 1422 aa10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
GPCPD1-201ENST00000379019 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
GPCPD1-201ENST00000379019 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
GPCPD1-201ENST00000379019 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
GPCPD1-201ENST00000379019 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
GPCPD1-201ENST00000379019 RIMS1Q86UR5 1692 aaKnown RBP10.41□□□□□ -0.74
GPCPD1-201ENST00000379019 CLSPNQ9HAW4 1339 aa10.4□□□□□ -0.74
GPCPD1-201ENST00000379019 TSPY4P0CV99 314 aa10.4□□□□□ -0.74
GPCPD1-201ENST00000379019 TSPY10P0CW01 314 aa10.4□□□□□ -0.74
GPCPD1-201ENST00000379019 MYT1Q01538 1121 aa10.39□□□□□ -0.75
GPCPD1-201ENST00000379019 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
GPCPD1-201ENST00000379019 ZNF142P52746 1687 aaPredicted RBP10.37□□□□□ -0.75
GPCPD1-201ENST00000379019 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
GPCPD1-201ENST00000379019 LMTK2Q8IWU2 1503 aa10.37□□□□□ -0.75
GPCPD1-201ENST00000379019 NBPF8Q3BBV2 869 aa10.37□□□□□ -0.75
GPCPD1-201ENST00000379019 ANKRD30AQ9BXX3 1397 aa10.37□□□□□ -0.75
GPCPD1-201ENST00000379019 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
GPCPD1-201ENST00000379019 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.75
GPCPD1-201ENST00000379019 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
GPCPD1-201ENST00000379019 DAPK1P53355 1430 aa10.36□□□□□ -0.75
GPCPD1-201ENST00000379019 IL27Q8NEV9 243 aa10.35□□□□□ -0.75
GPCPD1-201ENST00000379019 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
GPCPD1-201ENST00000379019 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
GPCPD1-201ENST00000379019 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
GPCPD1-201ENST00000379019 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
GPCPD1-201ENST00000379019 ARHGAP31Q2M1Z3 1444 aa10.34□□□□□ -0.75
GPCPD1-201ENST00000379019 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
GPCPD1-201ENST00000379019 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
GPCPD1-201ENST00000379019 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 C3P01024 1663 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 PZPP20742 1482 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 ABCC5O15440 1437 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.765e-8■□□□□ 11
GPCPD1-201ENST00000379019 NBR1Q14596 966 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 KANK1Q14678 1352 aa10.33□□□□□ -0.76
GPCPD1-201ENST00000379019 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 NLRP1Q9C000 1473 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 UHRF1BP1Q6BDS2 1440 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 PLA2R1Q13018 1463 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 NAIPQ13075 1403 aa10.32□□□□□ -0.76
GPCPD1-201ENST00000379019 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
GPCPD1-201ENST00000379019 RPRD2Q5VT52 1461 aaKnown RBP10.31□□□□□ -0.76
GPCPD1-201ENST00000379019 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
GPCPD1-201ENST00000379019 HSPA5P11021 654 aaKnown RBP10.31□□□□□ -0.76
GPCPD1-201ENST00000379019 DMRT2Q9Y5R5 561 aa10.31□□□□□ -0.76
GPCPD1-201ENST00000379019 UNC13BO14795 1591 aa10.3□□□□□ -0.76
GPCPD1-201ENST00000379019 CLTCQ00610 1675 aaKnown RBP10.3□□□□□ -0.76
GPCPD1-201ENST00000379019 PTPRTO14522 1441 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 IQSEC2Q5JU85 1478 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 LMTK3Q96Q04 1460 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
GPCPD1-201ENST00000379019 ABCC3O15438 1527 aa10.28□□□□□ -0.76
GPCPD1-201ENST00000379019 KIF15Q9NS87 1388 aa10.28□□□□□ -0.76
GPCPD1-201ENST00000379019 A2ML1A8K2U0 1454 aa10.28□□□□□ -0.76
GPCPD1-201ENST00000379019 DEKP35659 375 aaKnown RBP10.28□□□□□ -0.76
GPCPD1-201ENST00000379019 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
GPCPD1-201ENST00000379019 CAMSAP1Q5T5Y3 1602 aa10.27□□□□□ -0.76
GPCPD1-201ENST00000379019 MYO3AQ8NEV4 1616 aa10.27□□□□□ -0.76
GPCPD1-201ENST00000379019 NCOA1Q15788 1441 aa10.27□□□□□ -0.77
GPCPD1-201ENST00000379019 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
GPCPD1-201ENST00000379019 GCC2Q8IWJ2 1684 aa10.26□□□□□ -0.77
GPCPD1-201ENST00000379019 ZMYM3Q14202 1370 aa10.26□□□□□ -0.77
GPCPD1-201ENST00000379019 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
GPCPD1-201ENST00000379019 FANCIQ9NVI1 1328 aa10.25□□□□□ -0.77
GPCPD1-201ENST00000379019 TET3O43151 1660 aa10.25□□□□□ -0.77
GPCPD1-201ENST00000379019 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
GPCPD1-201ENST00000379019 PKD2Q13563 968 aa10.24□□□□□ -0.77
GPCPD1-201ENST00000379019 IQGAP3Q86VI3 1631 aa10.24□□□□□ -0.77
GPCPD1-201ENST00000379019 L3MBTL2Q969R5 705 aa10.23□□□□□ -0.77
GPCPD1-201ENST00000379019 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
GPCPD1-201ENST00000379019 PRKRIP1Q9H875 184 aaPredicted RBP10.23□□□□□ -0.77
GPCPD1-201ENST00000379019 TNRQ92752 1358 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms