RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-203ENST00000378904 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-203ENST00000378904 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
LYSMD4-203ENST00000378904 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
LYSMD4-203ENST00000378904 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 RAPGEF3O95398 923 aa25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 ZNF316A6NFI3 1004 aaPredicted RBP25.28■■□□□ 1.64
LYSMD4-203ENST00000378904 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
LYSMD4-203ENST00000378904 A2MP01023 1474 aa25.24■■□□□ 1.63
LYSMD4-203ENST00000378904 FRMPD1Q5SYB0 1578 aa25.23■■□□□ 1.63
LYSMD4-203ENST00000378904 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-203ENST00000378904 KIF3BO15066 747 aa25.21■■□□□ 1.63
LYSMD4-203ENST00000378904 MROH1Q8NDA8 1641 aa25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 DIP2CQ9Y2E4 1556 aa25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 PRDM15P57071 1507 aaPredicted RBP25.18■■□□□ 1.62
LYSMD4-203ENST00000378904 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
LYSMD4-203ENST00000378904 L3MBTL2Q969R5 705 aa25.16■■□□□ 1.62
LYSMD4-203ENST00000378904 ZMYM4Q5VZL5 1548 aa25.16■■□□□ 1.62
LYSMD4-203ENST00000378904 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
LYSMD4-203ENST00000378904 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
LYSMD4-203ENST00000378904 KANK1Q14678 1352 aa25.14■■□□□ 1.62
LYSMD4-203ENST00000378904 E9PCH4 1651 aa25.14■■□□□ 1.61
LYSMD4-203ENST00000378904 TET3O43151 1660 aa25.14■■□□□ 1.61
LYSMD4-203ENST00000378904 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
LYSMD4-203ENST00000378904 PLA2R1Q13018 1463 aa25.11■■□□□ 1.61
LYSMD4-203ENST00000378904 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
LYSMD4-203ENST00000378904 ATP10AO60312 1499 aa25.08■■□□□ 1.61
LYSMD4-203ENST00000378904 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.6
LYSMD4-203ENST00000378904 CEP152O94986 1710 aa25.06■■□□□ 1.6
LYSMD4-203ENST00000378904 SPHKAPQ2M3C7 1700 aa25.04■■□□□ 1.6
LYSMD4-203ENST00000378904 COL17A1Q9UMD9 1497 aaPredicted RBP25.03■■□□□ 1.6
LYSMD4-203ENST00000378904 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
LYSMD4-203ENST00000378904 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
LYSMD4-203ENST00000378904 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
LYSMD4-203ENST00000378904 GGT6Q6P531 493 aa25.01■■□□□ 1.59
LYSMD4-203ENST00000378904 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
LYSMD4-203ENST00000378904 TRPM2O94759 1503 aa24.99■■□□□ 1.59
LYSMD4-203ENST00000378904 PTPRTO14522 1441 aa24.98■■□□□ 1.59
LYSMD4-203ENST00000378904 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
LYSMD4-203ENST00000378904 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
LYSMD4-203ENST00000378904 ABCC3O15438 1527 aa24.95■■□□□ 1.58
LYSMD4-203ENST00000378904 CLTCL1P53675 1640 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 ARHGEF40Q8TER5 1519 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 CAMSAP1Q5T5Y3 1602 aa24.92■■□□□ 1.58
LYSMD4-203ENST00000378904 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
LYSMD4-203ENST00000378904 UHRF1BP1Q6BDS2 1440 aa24.9■■□□□ 1.58
LYSMD4-203ENST00000378904 DCAF11Q8TEB1 546 aa24.89■■□□□ 1.58
LYSMD4-203ENST00000378904 AGLP35573 1532 aa24.89■■□□□ 1.58
LYSMD4-203ENST00000378904 TRHP20396 242 aaPredicted RBP24.89■■□□□ 1.57
LYSMD4-203ENST00000378904 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 SIGLEC1Q9BZZ2 1709 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 NPATQ14207 1427 aa24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 HIRIP3Q9BW71 556 aaPredicted RBP24.88■■□□□ 1.57
LYSMD4-203ENST00000378904 KDM2AQ9Y2K7 1162 aa24.86■■□□□ 1.57
LYSMD4-203ENST00000378904 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
LYSMD4-203ENST00000378904 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.57
LYSMD4-203ENST00000378904 KIF1BO60333 1816 aa24.82■■□□□ 1.56
LYSMD4-203ENST00000378904 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
LYSMD4-203ENST00000378904 RALGAPBQ86X10 1494 aa24.81■■□□□ 1.56
LYSMD4-203ENST00000378904 HSPA5P11021 654 aaKnown RBP24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 ARHGAP31Q2M1Z3 1444 aa24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 NEURL4Q96JN8 1562 aa24.8■■□□□ 1.56
LYSMD4-203ENST00000378904 PRAG1Q86YV5 1406 aa24.79■■□□□ 1.56
LYSMD4-203ENST00000378904 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
LYSMD4-203ENST00000378904 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
LYSMD4-203ENST00000378904 NOS1P29475 1434 aa24.75■■□□□ 1.55
LYSMD4-203ENST00000378904 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
LYSMD4-203ENST00000378904 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
LYSMD4-203ENST00000378904 CLTCQ00610 1675 aaKnown RBP24.73■■□□□ 1.55
LYSMD4-203ENST00000378904 SYNMO15061 1565 aa24.72■■□□□ 1.55
LYSMD4-203ENST00000378904 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
LYSMD4-203ENST00000378904 PIK3C2BO00750 1634 aa24.71■■□□□ 1.55
LYSMD4-203ENST00000378904 MLECQ14165 292 aa24.7■■□□□ 1.54
LYSMD4-203ENST00000378904 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
LYSMD4-203ENST00000378904 MADDQ8WXG6 1647 aa24.69■■□□□ 1.54
LYSMD4-203ENST00000378904 IFT172Q9UG01 1749 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 ROCK2O75116 1388 aaKnown RBP24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 USP47Q96K76 1375 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 CARD11Q9BXL7 1154 aa24.68■■□□□ 1.54
LYSMD4-203ENST00000378904 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
LYSMD4-203ENST00000378904 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
LYSMD4-203ENST00000378904 LAMC1P11047 1609 aa24.64■■□□□ 1.53
LYSMD4-203ENST00000378904 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 CHGAP10645 457 aaKnown RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 MIER1Q8N108 512 aa24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
LYSMD4-203ENST00000378904 MYOM2P54296 1465 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 GPRASP1Q5JY77 1395 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 NBPF1Q3BBV0 1214 aa24.62■■□□□ 1.53
LYSMD4-203ENST00000378904 ERVK-7P63135 1459 aa24.61■■□□□ 1.53
LYSMD4-203ENST00000378904 PPLO60437 1756 aa24.61■■□□□ 1.53
LYSMD4-203ENST00000378904 WASHC2AQ641Q2 1341 aa24.6■■□□□ 1.53
LYSMD4-203ENST00000378904 FBXO31Q5XUX0 539 aaPredicted RBP24.59■■□□□ 1.53
LYSMD4-203ENST00000378904 SLC52A1Q9NWF4 448 aa24.59■■□□□ 1.53
LYSMD4-203ENST00000378904 IDI1Q13907 227 aa24.58■■□□□ 1.52
LYSMD4-203ENST00000378904 C11orf95C9JLR9 678 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms