RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 ANKRD30BQ9BXX2 1392 aa13.16□□□□□ -0.3
DMD-209ENST00000378702 KDM5CP41229 1560 aa13.16□□□□□ -0.3
DMD-209ENST00000378702 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
DMD-209ENST00000378702 E9PCH4 1651 aa13.15□□□□□ -0.3
DMD-209ENST00000378702 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
DMD-209ENST00000378702 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
DMD-209ENST00000378702 DMTNQ08495 405 aa13.14□□□□□ -0.31
DMD-209ENST00000378702 ZHX1Q9UKY1 873 aaPredicted RBP13.14□□□□□ -0.31
DMD-209ENST00000378702 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
DMD-209ENST00000378702 IGF1RP08069 1367 aa13.14□□□□□ -0.31
DMD-209ENST00000378702 SEC24BO95487 1268 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
DMD-209ENST00000378702 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
DMD-209ENST00000378702 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
DMD-209ENST00000378702 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
DMD-209ENST00000378702 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
DMD-209ENST00000378702 KIF14Q15058 1648 aa13.11□□□□□ -0.31
DMD-209ENST00000378702 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
DMD-209ENST00000378702 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
DMD-209ENST00000378702 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
DMD-209ENST00000378702 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
DMD-209ENST00000378702 CANXP27824 592 aaKnown RBP13.1□□□□□ -0.31
DMD-209ENST00000378702 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
DMD-209ENST00000378702 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
DMD-209ENST00000378702 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
DMD-209ENST00000378702 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
DMD-209ENST00000378702 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
DMD-209ENST00000378702 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
DMD-209ENST00000378702 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
DMD-209ENST00000378702 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
DMD-209ENST00000378702 PARD3Q8TEW0 1356 aa13.09□□□□□ -0.31
DMD-209ENST00000378702 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
DMD-209ENST00000378702 FOXD1Q16676 465 aa13.09□□□□□ -0.31
DMD-209ENST00000378702 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
DMD-209ENST00000378702 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
DMD-209ENST00000378702 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
DMD-209ENST00000378702 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.32
DMD-209ENST00000378702 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.32
DMD-209ENST00000378702 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
DMD-209ENST00000378702 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
DMD-209ENST00000378702 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
DMD-209ENST00000378702 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
DMD-209ENST00000378702 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
DMD-209ENST00000378702 CCDC144AA2RUR9 1427 aa13.06□□□□□ -0.32
DMD-209ENST00000378702 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
DMD-209ENST00000378702 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
DMD-209ENST00000378702 UQCRHP07919 91 aa13.06□□□□□ -0.32
DMD-209ENST00000378702 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
DMD-209ENST00000378702 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
DMD-209ENST00000378702 ZMYM3Q14202 1370 aa13.05□□□□□ -0.32
DMD-209ENST00000378702 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
DMD-209ENST00000378702 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
DMD-209ENST00000378702 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
DMD-209ENST00000378702 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
DMD-209ENST00000378702 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
DMD-209ENST00000378702 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
DMD-209ENST00000378702 KIF20AO95235 890 aa13.04□□□□□ -0.32
DMD-209ENST00000378702 ZNF500O60304 480 aaPredicted RBP13.03□□□□□ -0.32
DMD-209ENST00000378702 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
DMD-209ENST00000378702 HS1BP3Q53T59 392 aa13.03□□□□□ -0.32
DMD-209ENST00000378702 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
DMD-209ENST00000378702 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.32
DMD-209ENST00000378702 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.32
DMD-209ENST00000378702 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.32
DMD-209ENST00000378702 CFTRP13569 1480 aa13.02□□□□□ -0.33
DMD-209ENST00000378702 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
DMD-209ENST00000378702 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
DMD-209ENST00000378702 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
DMD-209ENST00000378702 IGHDP01880 384 aa13.01□□□□□ -0.33
DMD-209ENST00000378702 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
DMD-209ENST00000378702 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
DMD-209ENST00000378702 TMEM51Q9NW97 253 aa13.01□□□□□ -0.33
DMD-209ENST00000378702 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
DMD-209ENST00000378702 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
DMD-209ENST00000378702 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
DMD-209ENST00000378702 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
DMD-209ENST00000378702 LETM1O95202 739 aaPredicted RBP12.99□□□□□ -0.33
DMD-209ENST00000378702 ANP32BQ92688 251 aaKnown RBP12.99□□□□□ -0.33
DMD-209ENST00000378702 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
DMD-209ENST00000378702 UHRF1BP1Q6BDS2 1440 aa12.99□□□□□ -0.33
DMD-209ENST00000378702 PTMSP20962 102 aa12.98□□□□□ -0.33
DMD-209ENST00000378702 DDIT3P35638 169 aa12.98□□□□□ -0.33
DMD-209ENST00000378702 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
DMD-209ENST00000378702 ARID3AQ99856 593 aa12.98□□□□□ -0.33
DMD-209ENST00000378702 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
DMD-209ENST00000378702 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
DMD-209ENST00000378702 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
DMD-209ENST00000378702 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
DMD-209ENST00000378702 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.33
DMD-209ENST00000378702 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.34
DMD-209ENST00000378702 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
DMD-209ENST00000378702 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
DMD-209ENST00000378702 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
DMD-209ENST00000378702 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
DMD-209ENST00000378702 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms