RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 RALGAPBQ86X10 1494 aa37.22■■■■□ 3.55
TPM2-203ENST00000378292 CNTLNQ9NXG0 1405 aa37.22■■■■□ 3.55
TPM2-203ENST00000378292 USP47Q96K76 1375 aa37.21■■■■□ 3.55
TPM2-203ENST00000378292 POLR1AO95602 1720 aaPredicted RBP37.21■■■■□ 3.55
TPM2-203ENST00000378292 DCAF11Q8TEB1 546 aa37.19■■■■□ 3.54
TPM2-203ENST00000378292 KDM2AQ9Y2K7 1162 aa37.19■■■■□ 3.54
TPM2-203ENST00000378292 ADGRL1O94910 1474 aa37.18■■■■□ 3.54
TPM2-203ENST00000378292 KIF7Q2M1P5 1343 aa37.17■■■■□ 3.54
TPM2-203ENST00000378292 KDM5CP41229 1560 aa37.16■■■■□ 3.54
TPM2-203ENST00000378292 SCAPERQ9BY12 1400 aa37.15■■■■□ 3.54
TPM2-203ENST00000378292 INO80Q9ULG1 1556 aaPredicted RBP37.15■■■■□ 3.54
TPM2-203ENST00000378292 ATP7AQ04656 1500 aa37.15■■■■□ 3.54
TPM2-203ENST00000378292 ATP10AO60312 1499 aa37.12■■■■□ 3.53
TPM2-203ENST00000378292 CARD11Q9BXL7 1154 aa37.09■■■■□ 3.53
TPM2-203ENST00000378292 BCORL1Q5H9F3 1711 aa37.06■■■■□ 3.52
TPM2-203ENST00000378292 RGL3Q3MIN7 710 aa37.04■■■■□ 3.52
TPM2-203ENST00000378292 DEPDC5O75140 1603 aa37.04■■■■□ 3.52
TPM2-203ENST00000378292 PRAG1Q86YV5 1406 aa37.02■■■■□ 3.52
TPM2-203ENST00000378292 MYT1LQ9UL68 1186 aa37.01■■■■□ 3.52
TPM2-203ENST00000378292 A2MP01023 1474 aa37.01■■■■□ 3.52
TPM2-203ENST00000378292 E9PCH4 1651 aa36.98■■■■□ 3.51
TPM2-203ENST00000378292 CD109Q6YHK3 1445 aa36.98■■■■□ 3.51
TPM2-203ENST00000378292 ROCK2O75116 1388 aaKnown RBP36.98■■■■□ 3.51
TPM2-203ENST00000378292 TRPM1Q7Z4N2 1603 aa36.96■■■■□ 3.51
TPM2-203ENST00000378292 ARID4BQ4LE39 1312 aaPredicted RBP36.96■■■■□ 3.51
TPM2-203ENST00000378292 DHX29Q7Z478 1369 aaKnown RBP36.95■■■■□ 3.51
TPM2-203ENST00000378292 ZNF518AQ6AHZ1 1483 aa36.94■■■■□ 3.5
TPM2-203ENST00000378292 EIF2AK4Q9P2K8 1649 aaKnown RBP36.93■■■■□ 3.5
TPM2-203ENST00000378292 PRKRIP1Q9H875 184 aaPredicted RBP36.92■■■■□ 3.5
TPM2-203ENST00000378292 CFAP74Q9C0B2 1584 aa36.92■■■■□ 3.5
TPM2-203ENST00000378292 KIF3BO15066 747 aa36.92■■■■□ 3.5
TPM2-203ENST00000378292 KIDINS220Q9ULH0 1771 aa36.91■■■■□ 3.5
TPM2-203ENST00000378292 KANK1Q14678 1352 aa36.91■■■■□ 3.5
TPM2-203ENST00000378292 VWDEQ8N2E2 1590 aa36.9■■■■□ 3.5
TPM2-203ENST00000378292 TET3O43151 1660 aa36.9■■■■□ 3.5
TPM2-203ENST00000378292 ST20-MTHFSA0A0A6YYL1 179 aa36.89■■■■□ 3.5
TPM2-203ENST00000378292 TRPM2O94759 1503 aa36.87■■■■□ 3.49
TPM2-203ENST00000378292 POLR3GLQ9BT43 218 aa36.86■■■■□ 3.49
TPM2-203ENST00000378292 PRDM15P57071 1507 aaPredicted RBP36.85■■■■□ 3.49
TPM2-203ENST00000378292 PTPRTO14522 1441 aa36.85■■■■□ 3.49
TPM2-203ENST00000378292 SPHKAPQ2M3C7 1700 aa36.84■■■■□ 3.49
TPM2-203ENST00000378292 MROH1Q8NDA8 1641 aa36.83■■■■□ 3.49
TPM2-203ENST00000378292 POGZQ7Z3K3 1410 aa36.83■■■■□ 3.49
TPM2-203ENST00000378292 GPRASP1Q5JY77 1395 aa36.83■■■■□ 3.49
TPM2-203ENST00000378292 NBPF1Q3BBV0 1214 aa36.82■■■■□ 3.48
TPM2-203ENST00000378292 LAMC1P11047 1609 aa36.77■■■■□ 3.48
TPM2-203ENST00000378292 CCDC184Q52MB2 194 aa36.76■■■■□ 3.48
TPM2-203ENST00000378292 CEP152O94986 1710 aa36.76■■■■□ 3.47
TPM2-203ENST00000378292 CLTCL1P53675 1640 aa36.75■■■■□ 3.47
TPM2-203ENST00000378292 MLH3Q9UHC1 1453 aa36.74■■■■□ 3.47
TPM2-203ENST00000378292 NEO1Q92859 1461 aa36.7■■■■□ 3.47
TPM2-203ENST00000378292 HECW2Q9P2P5 1572 aa36.7■■■■□ 3.47
TPM2-203ENST00000378292 MRS2Q9HD23 443 aa36.67■■■■□ 3.46
TPM2-203ENST00000378292 HNRNPUQ00839 825 aaKnown RBP eCLIP36.67■■■■□ 3.46
TPM2-203ENST00000378292 RNF17Q9BXT8 1623 aaKnown RBP36.66■■■■□ 3.46
TPM2-203ENST00000378292 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
TPM2-203ENST00000378292 EFCAB6Q5THR3 1501 aa36.66■■■■□ 3.46
TPM2-203ENST00000378292 SUPT16HQ9Y5B9 1047 aaKnown RBP36.65■■■■□ 3.46
TPM2-203ENST00000378292 MADDQ8WXG6 1647 aa36.64■■■■□ 3.46
TPM2-203ENST00000378292 FRMPD1Q5SYB0 1578 aa36.64■■■■□ 3.46
TPM2-203ENST00000378292 LMTK2Q8IWU2 1503 aa36.62■■■■□ 3.45
TPM2-203ENST00000378292 STAC3Q96MF2 364 aa36.62■■■■□ 3.45
TPM2-203ENST00000378292 PPRC1Q5VV67 1664 aaKnown RBP36.61■■■■□ 3.45
TPM2-203ENST00000378292 ABCA6Q8N139 1617 aa36.59■■■■□ 3.45
TPM2-203ENST00000378292 RAPGEF3O95398 923 aa36.58■■■■□ 3.45
TPM2-203ENST00000378292 NEURL4Q96JN8 1562 aa36.57■■■■□ 3.45
TPM2-203ENST00000378292 MAP3K4Q9Y6R4 1608 aa36.57■■■■□ 3.44
TPM2-203ENST00000378292 TESK2Q96S53 571 aa36.56■■■■□ 3.44
TPM2-203ENST00000378292 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
TPM2-203ENST00000378292 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
TPM2-203ENST00000378292 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
TPM2-203ENST00000378292 CNGB1Q14028 1251 aaPredicted RBP36.55■■■■□ 3.44
TPM2-203ENST00000378292 FAM9BQ8IZU0 186 aa36.55■■■■□ 3.44
TPM2-203ENST00000378292 UGGT1Q9NYU2 1555 aa36.55■■■■□ 3.44
TPM2-203ENST00000378292 COL17A1Q9UMD9 1497 aaPredicted RBP36.54■■■■□ 3.44
TPM2-203ENST00000378292 GGT6Q6P531 493 aa36.5■■■■□ 3.43
TPM2-203ENST00000378292 GLI2P10070 1586 aa36.49■■■■□ 3.43
TPM2-203ENST00000378292 DISP3Q9P2K9 1392 aa36.49■■■■□ 3.43
TPM2-203ENST00000378292 KIF1BO60333 1816 aa36.48■■■■□ 3.43
TPM2-203ENST00000378292 RICTORQ6R327 1708 aa36.46■■■■□ 3.43
TPM2-203ENST00000378292 IQGAP1P46940 1657 aa36.45■■■■□ 3.43
TPM2-203ENST00000378292 DIP2CQ9Y2E4 1556 aa36.44■■■■□ 3.42
TPM2-203ENST00000378292 NPATQ14207 1427 aa36.44■■■■□ 3.42
TPM2-203ENST00000378292 TMF1P82094 1093 aa36.43■■■■□ 3.42
TPM2-203ENST00000378292 ABCC3O15438 1527 aa36.4■■■■□ 3.42
TPM2-203ENST00000378292 MYOM2P54296 1465 aa36.4■■■■□ 3.42
TPM2-203ENST00000378292 KTN1Q86UP2 1357 aaKnown RBP36.4■■■■□ 3.42
TPM2-203ENST00000378292 WASHC2CQ9Y4E1 1318 aa36.4■■■■□ 3.42
TPM2-203ENST00000378292 SCAF11Q99590 1463 aaKnown RBP36.39■■■■□ 3.42
TPM2-203ENST00000378292 KIAA1210Q9ULL0 1709 aa36.38■■■■□ 3.41
TPM2-203ENST00000378292 MROH2AA6NES4 1674 aa36.38■■■■□ 3.41
TPM2-203ENST00000378292 FKBP8Q14318 412 aa36.35■■■■□ 3.41
TPM2-203ENST00000378292 RALBP1Q15311 655 aa36.35■■■■□ 3.41
TPM2-203ENST00000378292 IFT172Q9UG01 1749 aa36.35■■■■□ 3.41
TPM2-203ENST00000378292 CFAP65Q6ZU64 1925 aaKnown RBP36.33■■■■□ 3.41
TPM2-203ENST00000378292 FAM69CQ0P6D2 419 aa36.33■■■■□ 3.41
TPM2-203ENST00000378292 ADGRB3O60242 1522 aa36.33■■■■□ 3.41
TPM2-203ENST00000378292 ADGRF5Q8IZF2 1346 aa36.32■■■■□ 3.41
TPM2-203ENST00000378292 PER1O15534 1290 aaPredicted RBP36.32■■■■□ 3.4
TPM2-203ENST00000378292 DIP2BQ9P265 1576 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms